MGE detailed information
MGE type: Prophage MGE length: 92335 bp
Accession: NZ_CP047856 Location: 1133649..1225983 Organism: Staphylococcus aureus strain UP_1435 Replicon: chromosome
Accession: NZ_CP047856 Location: 1133649..1225983 Organism: Staphylococcus aureus strain UP_1435 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S66_RS05580 () | 1129841..1131298 | - | 1458 | WP_000129659.1 | D-alanine--poly(phosphoribitol) ligase subunit DltA | - |
| E3S66_RS05585 () | 1131314..1131466 | - | 153 | WP_000837752.1 | teichoic acid D-Ala incorporation-associated protein DltX | - |
| E3S66_RS05590 () | 1131514..1131624 | - | 111 | WP_001790652.1 | hypothetical protein | - |
| E3S66_RS05595 () | 1131878..1132837 | - | 960 | WP_000239131.1 | D-glycerate dehydrogenase | - |
| E3S66_RS05600 () | 1132870..1133649 | - | 780 | WP_000816184.1 | TIGR01457 family HAD-type hydrolase | - |
| E3S66_RS05605 () | 1133649..1134083 | - | 435 | WP_000273982.1 | DUF86 domain-containing protein | - |
| E3S66_RS05610 () | 1134181..1134447 | + | 267 | WP_000566649.1 | DUF3055 domain-containing protein | - |
| E3S66_RS05615 () | 1134525..1135844 | - | 1320 | WP_001557163.1 | ISL3 family transposase IS1181 | Transposase |
| E3S66_RS05620 () | 1136050..1136433 | - | 384 | WP_000598444.1 | YutD family protein | - |
| E3S66_RS05625 () | 1136563..1137480 | - | 918 | WP_000201875.1 | lipoyl synthase | - |
| E3S66_RS05630 () | 1137564..1138883 | - | 1320 | WP_001241246.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| E3S66_RS05635 () | 1138910..1139737 | - | 828 | WP_000927632.1 | sulfite exporter TauE/SafE family protein | - |
| E3S66_RS05640 () | 1139750..1140598 | - | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
| E3S66_RS05645 () | 1140646..1140729 | - | 84 | WP_016170465.1 | hypothetical protein | - |
| E3S66_RS05650 () | 1140940..1142007 | - | 1068 | WP_000267236.1 | nitronate monooxygenase family protein | - |
| E3S66_RS05655 () | 1142021..1143061 | - | 1041 | WP_000582326.1 | HlyC/CorC family transporter | - |
| E3S66_RS05660 () | 1143426..1143740 | + | 315 | WP_000274029.1 | hypothetical protein | - |
| E3S66_RS05665 () | 1143746..1143885 | - | 140 | Protein_1085 | hypothetical protein | - |
| E3S66_RS05670 () | 1144570..1144755 | - | 186 | WP_001286805.1 | hypothetical protein | - |
| E3S66_RS05675 () | 1144757..1144867 | - | 111 | WP_000139423.1 | hypothetical protein | - |
| E3S66_RS05680 () | 1144938..1145090 | - | 153 | WP_001788502.1 | hypothetical protein | - |
| E3S66_RS05685 () | 1145465..1146022 | + | 558 | WP_001035620.1 | DUF4888 domain-containing protein | - |
| E3S66_RS05690 () | 1146082..1147494 | - | 1413 | WP_001141517.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E3S66_RS05695 () | 1147481..1147756 | - | 276 | WP_000351119.1 | phage holin | - |
| E3S66_RS05700 () | 1147812..1148207 | - | 396 | WP_000398868.1 | hypothetical protein | - |
| E3S66_RS05705 () | 1148213..1149451 | - | 1239 | WP_000276662.1 | BppU family phage baseplate upper protein | - |
| E3S66_RS05710 () | 1149464..1151362 | - | 1899 | WP_000524022.1 | hypothetical protein | VF |
| E3S66_RS05715 () | 1151499..1151798 | - | 300 | WP_000466778.1 | DUF2951 domain-containing protein | - |
| E3S66_RS05720 () | 1151838..1152011 | - | 174 | WP_000782200.1 | XkdX family protein | - |
| E3S66_RS05725 () | 1152015..1152392 | - | 378 | WP_000705896.1 | DUF2977 domain-containing protein | - |
| E3S66_RS05730 () | 1152392..1154215 | - | 1824 | WP_000259619.1 | BppU family phage baseplate upper protein | - |
| E3S66_RS05735 () | 1154215..1156125 | - | 1911 | WP_000369017.1 | hypothetical protein | - |
| E3S66_RS05740 () | 1156140..1158041 | - | 1902 | WP_000152714.1 | phage tail protein | - |
| E3S66_RS05745 () | 1158050..1158997 | - | 948 | WP_000350675.1 | phage tail family protein | - |
| E3S66_RS05750 () | 1159010..1162477 | - | 3468 | WP_000141480.1 | hypothetical protein | - |
| E3S66_RS05755 () | 1162494..1162838 | - | 345 | WP_000105584.1 | hypothetical protein | - |
| E3S66_RS05760 () | 1162868..1163233 | - | 366 | WP_001100161.1 | tail assembly chaperone | - |
| E3S66_RS05765 () | 1163295..1163876 | - | 582 | WP_000002577.1 | phage major tail protein, TP901-1 family | - |
| E3S66_RS05770 () | 1163895..1164278 | - | 384 | WP_000188643.1 | hypothetical protein | - |
| E3S66_RS05775 () | 1164290..1164637 | - | 348 | WP_001017817.1 | HK97 gp10 family phage protein | - |
| E3S66_RS05780 () | 1164637..1164939 | - | 303 | WP_001268312.1 | hypothetical protein | - |
| E3S66_RS05785 () | 1164936..1165268 | - | 333 | WP_000208960.1 | phage head-tail connector protein | - |
| E3S66_RS05790 () | 1165277..1165564 | - | 288 | WP_001114086.1 | hypothetical protein | - |
| E3S66_RS05795 () | 1165586..1166560 | - | 975 | WP_000438511.1 | phage major capsid protein | - |
| E3S66_RS05800 () | 1166574..1167194 | - | 621 | WP_000392151.1 | DUF4355 domain-containing protein | - |
| E3S66_RS05805 () | 1167303..1167473 | - | 171 | WP_000072208.1 | hypothetical protein | - |
| E3S66_RS05810 () | 1167546..1168541 | - | 996 | WP_001133044.1 | minor capsid protein | - |
| E3S66_RS05815 () | 1168548..1170086 | - | 1539 | WP_160176664.1 | phage portal protein | - |
| E3S66_RS05820 () | 1170097..1171392 | - | 1296 | WP_000273011.1 | PBSX family phage terminase large subunit | - |
| E3S66_RS05825 () | 1171395..1171889 | - | 495 | WP_001038244.1 | terminase small subunit | - |
| E3S66_RS05830 () | 1172077..1172499 | - | 423 | WP_000162701.1 | RinA family phage transcriptional activator | - |
| E3S66_RS05835 () | 1172565..1172669 | - | 105 | WP_000990004.1 | hypothetical protein | - |
| E3S66_RS05840 () | 1172670..1172843 | - | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| E3S66_RS05845 () | 1172836..1173072 | - | 237 | WP_000608278.1 | hypothetical protein | - |
| E3S66_RS05850 () | 1173065..1173268 | - | 204 | WP_001072795.1 | hypothetical protein | - |
| E3S66_RS05855 () | 1173265..1173459 | - | 195 | WP_000132921.1 | hypothetical protein | - |
| E3S66_RS05860 () | 1173456..1173662 | - | 207 | WP_000617154.1 | DUF1381 domain-containing protein | - |
| E3S66_RS05865 () | 1173699..1174232 | - | 534 | WP_000185647.1 | dUTP pyrophosphatase | - |
| E3S66_RS05870 () | 1174225..1174395 | - | 171 | WP_000714412.1 | hypothetical protein | - |
| E3S66_RS05875 () | 1174382..1174636 | - | 255 | WP_001065060.1 | DUF1024 family protein | - |
| E3S66_RS05880 () | 1174629..1175000 | - | 372 | WP_001557190.1 | hypothetical protein | - |
| E3S66_RS05885 () | 1175009..1175251 | - | 243 | WP_000131376.1 | hypothetical protein | - |
| E3S66_RS05890 () | 1175255..1175611 | - | 357 | WP_000029376.1 | hypothetical protein | - |
| E3S66_RS05895 () | 1175739..1176044 | - | 306 | WP_000101252.1 | hypothetical protein | - |
| E3S66_RS05900 () | 1176045..1176230 | - | 186 | WP_001187243.1 | DUF3113 family protein | - |
| E3S66_RS05905 () | 1176235..1176639 | - | 405 | WP_000049794.1 | DUF1064 domain-containing protein | - |
| E3S66_RS05910 () | 1176649..1176870 | - | 222 | WP_001123695.1 | DUF3269 family protein | - |
| E3S66_RS05915 () | 1176883..1177041 | - | 159 | WP_000256589.1 | hypothetical protein | - |
| E3S66_RS05920 () | 1177035..1177814 | - | 780 | WP_000803062.1 | ATP-binding protein | - |
| E3S66_RS05925 () | 1177824..1178595 | - | 772 | Protein_1137 | phage protein | - |
| E3S66_RS05930 () | 1178661..1178942 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| E3S66_RS14730 () | 1178935..1179084 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| E3S66_RS05935 () | 1179081..1179755 | - | 675 | WP_001124438.1 | hypothetical protein | - |
| E3S66_RS05940 () | 1179769..1180197 | - | 429 | WP_000934385.1 | single-stranded DNA-binding protein | - |
| E3S66_RS05945 () | 1180197..1180820 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| E3S66_RS05950 () | 1180813..1181034 | - | 222 | WP_000815401.1 | DUF2483 family protein | - |
| E3S66_RS05955 () | 1181044..1181304 | - | 261 | WP_000291090.1 | DUF1108 family protein | - |
| E3S66_RS05960 () | 1181309..1181611 | - | 303 | WP_000165363.1 | DUF2482 family protein | - |
| E3S66_RS05965 () | 1181705..1181866 | - | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| E3S66_RS05970 () | 1181859..1182080 | - | 222 | WP_000977381.1 | hypothetical protein | - |
| E3S66_RS05975 () | 1182094..1182543 | - | 450 | WP_001094943.1 | hypothetical protein | - |
| E3S66_RS05980 () | 1182583..1182807 | - | 225 | WP_000187184.1 | hypothetical protein | - |
| E3S66_RS05985 () | 1182808..1183575 | - | 768 | WP_001002757.1 | phage antirepressor Ant | - |
| E3S66_RS05990 () | 1183575..1183769 | - | 195 | WP_000108122.1 | helix-turn-helix domain-containing protein | - |
| E3S66_RS05995 () | 1184032..1184364 | + | 333 | WP_001055143.1 | helix-turn-helix domain-containing protein | - |
| E3S66_RS06000 () | 1184381..1185055 | + | 675 | WP_000775187.1 | ImmA/IrrE family metallo-endopeptidase | - |
| E3S66_RS06005 () | 1185083..1185808 | + | 726 | WP_000661437.1 | PH domain-containing protein | - |
| E3S66_RS06010 () | 1185840..1186772 | + | 933 | WP_000392186.1 | hypothetical protein | - |
| E3S66_RS06015 () | 1186752..1186931 | - | 180 | WP_000337826.1 | hypothetical protein | - |
| E3S66_RS06020 () | 1187044..1188093 | + | 1050 | WP_001145726.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E3S66_RS06025 () | 1188161..1189558 | - | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| E3S66_RS06030 () | 1189709..1190173 | - | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| E3S66_RS06035 () | 1190163..1191413 | - | 1251 | WP_001006450.1 | cysteine desulfurase | - |
| E3S66_RS06040 () | 1191519..1192826 | - | 1308 | WP_000205567.1 | Fe-S cluster assembly protein SufD | - |
| E3S66_RS06045 () | 1192924..1193685 | - | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| E3S66_RS06050 () | 1194013..1194864 | + | 852 | WP_001183854.1 | DUF368 domain-containing protein | - |
| E3S66_RS06055 () | 1195098..1195292 | - | 195 | WP_000752917.1 | CsbD family protein | - |
| E3S66_RS06060 () | 1195646..1196467 | - | 822 | WP_000732324.1 | hypothetical protein | VF |
| E3S66_RS06065 () | 1196485..1197180 | - | 696 | WP_000520231.1 | ABC transporter permease | - |
| E3S66_RS06070 () | 1197173..1198198 | - | 1026 | WP_000571213.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| E3S66_RS06075 () | 1198448..1198744 | - | 297 | WP_001065801.1 | thioredoxin family protein | - |
| E3S66_RS06080 () | 1198737..1199123 | - | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| E3S66_RS06085 () | 1199920..1200798 | - | 879 | WP_000932225.1 | DUF1963 domain-containing protein | - |
| E3S66_RS06095 () | 1200977..1201357 | - | 381 | WP_000290491.1 | glycine cleavage system protein GcvH | - |
| E3S66_RS06100 () | 1201515..1201871 | - | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| E3S66_RS06105 () | 1202015..1202335 | + | 321 | WP_001147952.1 | thioredoxin family protein | - |
| E3S66_RS06110 () | 1202486..1203025 | - | 540 | WP_000422908.1 | nitroreductase | - |
| E3S66_RS06115 () | 1203108..1203824 | - | 717 | WP_000150011.1 | type I 3-dehydroquinate dehydratase | - |
| E3S66_RS06120 () | 1203972..1204394 | + | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| E3S66_RS06125 () | 1204793..1205287 | + | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| E3S66_RS06130 () | 1205442..1206059 | + | 618 | WP_000255551.1 | LysE/ArgO family amino acid transporter | - |
| E3S66_RS06135 () | 1206132..1206713 | - | 582 | WP_001140693.1 | phosphoglycerate mutase family protein | - |
| E3S66_RS06140 () | 1206938..1207174 | + | 237 | WP_000349581.1 | hypothetical protein | - |
| E3S66_RS06145 () | 1207171..1207374 | - | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| E3S66_RS06150 () | 1207715..1207975 | + | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| E3S66_RS06155 () | 1208004..1208192 | + | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| E3S66_RS06160 () | 1208380..1208949 | + | 570 | WP_001106658.1 | hypothetical protein | - |
| E3S66_RS06165 () | 1209037..1209321 | + | 285 | WP_001004399.1 | hypothetical protein | - |
| E3S66_RS06170 () | 1209383..1209601 | + | 219 | WP_000005886.1 | hypothetical protein | - |
| E3S66_RS06175 () | 1210093..1210293 | - | 201 | WP_001059082.1 | cold-shock protein | - |
| E3S66_RS06180 () | 1210650..1211336 | - | 687 | WP_000141557.1 | thermonuclease family protein | - |
| E3S66_RS06185 () | 1211677..1212198 | - | 522 | WP_000824482.1 | hypothetical protein | VF |
| E3S66_RS06190 () | 1212533..1213555 | - | 1023 | WP_000728068.1 | extracellular matrix protein-binding adhesin Emp | - |
| E3S66_RS06195 () | 1213908..1215410 | - | 1503 | WP_000791700.1 | hypothetical protein | VF |
| E3S66_RS06200 () | 1215631..1218348 | - | 2718 | WP_001056191.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| E3S66_RS06205 () | 1218611..1219141 | - | 531 | WP_001167158.1 | N-acetyltransferase | - |
| E3S66_RS06210 () | 1219280..1219801 | - | 522 | WP_000608192.1 | hypothetical protein | - |
| E3S66_RS06215 () | 1219809..1219964 | - | 156 | WP_001790158.1 | hypothetical protein | - |
| E3S66_RS06220 () | 1220399..1221127 | + | 729 | WP_000757397.1 | DUF5067 domain-containing protein | - |
| E3S66_RS14735 () | 1221218..1221464 | + | 247 | Protein_1197 | hypothetical protein | - |
| E3S66_RS06230 () | 1221480..1221803 | + | 324 | WP_001058299.1 | hypothetical protein | - |
| E3S66_RS06240 () | 1223125..1223589 | - | 465 | WP_001085183.1 | SsrA-binding protein SmpB | - |
| E3S66_RS06245 () | 1223611..1225983 | - | 2373 | WP_001050048.1 | ribonuclease R | - |
| E3S66_RS06250 () | 1226017..1226757 | - | 741 | WP_001165959.1 | carboxylesterase | - |
| E3S66_RS06255 () | 1226873..1227106 | - | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| E3S66_RS06260 () | 1227173..1227631 | - | 459 | WP_000785252.1 | hypothetical protein | - |
| E3S66_RS06265 () | 1227970..1229274 | - | 1305 | WP_160176665.1 | phosphopyruvate hydratase | - |
| E3S66_RS06270 () | 1229404..1230921 | - | 1518 | WP_001085505.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|