MGE detailed information
MGE type: Prophage MGE length: 73397 bp
Accession: NZ_CP047828 Location: 1..73397 Organism: Staphylococcus aureus strain UP_1073 Replicon: chromosome
Accession: NZ_CP047828 Location: 1..73397 Organism: Staphylococcus aureus strain UP_1073 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S96_RS00010 () | 1..1662 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| E3S96_RS00015 () | 1678..2865 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| E3S96_RS00020 () | 2849..3586 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| E3S96_RS00025 () | 3610..4755 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| E3S96_RS00030 () | 4775..5059 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| E3S96_RS00035 () | 5049..5333 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| E3S96_RS00040 () | 5317..5679 | + | 363 | WP_061684363.1 | head-tail adaptor protein | - |
| E3S96_RS00045 () | 5676..6080 | + | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| E3S96_RS00050 () | 6077..6484 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| E3S96_RS00055 () | 6485..7129 | + | 645 | WP_000268733.1 | phage tail protein | - |
| E3S96_RS00060 () | 7171..7395 | + | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| E3S96_RS00065 () | 7445..7795 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| E3S96_RS00070 () | 7822..7983 | + | 162 | WP_001789580.1 | hypothetical protein | - |
| E3S96_RS00075 () | 8040..12569 | + | 4530 | WP_001796452.1 | phage tail tape measure protein | - |
| E3S96_RS00080 () | 12566..14050 | + | 1485 | WP_000567408.1 | phage tail family protein | - |
| E3S96_RS00085 () | 14066..17851 | + | 3786 | WP_000582165.1 | hypothetical protein | - |
| E3S96_RS00090 () | 17841..17993 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| E3S96_RS00095 () | 18040..18327 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| E3S96_RS00100 () | 18385..18681 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| E3S96_RS00105 () | 18831..19007 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 18997..19138 | - | 142 | - | - | Antitoxin Detail |
| E3S96_RS00115 () | 19219..19473 | + | 255 | WP_000611512.1 | phage holin | - |
| E3S96_RS00120 () | 19485..20240 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| E3S96_RS00125 () | 20431..20922 | + | 492 | WP_000919350.1 | hypothetical protein | VF |
| E3S96_RS00130 () | 21571..21906 | + | 336 | Protein_25 | SH3 domain-containing protein | - |
| E3S96_RS00135 () | 22001..22450 | - | 450 | WP_000727649.1 | hypothetical protein | VF |
| E3S96_RS00140 () | 23134..23484 | + | 351 | WP_000702263.1 | hypothetical protein | VF |
| E3S96_RS00145 () | 23537..23797 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| E3S96_RS00150 () | 24108..24287 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| E3S96_RS00155 () | 24609..24856 | - | 248 | Protein_30 | hypothetical protein | VF |
| E3S96_RS00160 () | 25245..27314 | + | 2070 | WP_000669710.1 | hypothetical protein | VF |
| E3S96_RS00165 () | 27585..28871 | - | 1287 | WP_001068518.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| E3S96_RS00170 () | 29071..29169 | + | 99 | WP_000990056.1 | hypothetical protein | - |
| E3S96_RS00175 () | 29411..29587 | + | 177 | WP_000681966.1 | hypothetical protein | - |
| E3S96_RS00180 () | 29845..30225 | + | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| E3S96_RS00185 () | 30222..31118 | + | 897 | WP_000991300.1 | hypothetical protein | VF |
| E3S96_RS00190 () | 31119..31799 | + | 681 | WP_000645721.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| E3S96_RS00195 () | 31796..32668 | + | 873 | WP_000763048.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtC | - |
| E3S96_RS00200 () | 32668..33408 | + | 741 | WP_001221648.1 | phenol-soluble modulin export ABC transporter permease subunit PmtD | - |
| E3S96_RS00205 () | 33474..34037 | - | 564 | WP_000182842.1 | thioredoxin family protein | - |
| E3S96_RS00210 () | 34158..34682 | + | 525 | WP_000966286.1 | membrane protein | - |
| E3S96_RS00215 () | 34742..35299 | + | 558 | WP_001033966.1 | DUF1700 domain-containing protein | - |
| E3S96_RS00220 () | 35296..36138 | + | 843 | WP_000713063.1 | DUF4097 family beta strand repeat protein | - |
| E3S96_RS00225 () | 36195..37235 | - | 1041 | WP_160190627.1 | acyl-CoA--6-aminopenicillanic acid acyltransferase | - |
| E3S96_RS00230 () | 37686..37859 | + | 174 | WP_000267034.1 | hypothetical protein | - |
| E3S96_RS00235 () | 37916..38317 | - | 402 | WP_000205103.1 | YolD-like family protein | - |
| E3S96_RS00240 () | 38587..39615 | + | 1029 | WP_160190507.1 | lactonase family protein | - |
| E3S96_RS00245 () | 39735..41114 | - | 1380 | WP_160190508.1 | aldehyde dehydrogenase | - |
| E3S96_RS00250 () | 41166..41339 | + | 174 | WP_001790680.1 | hypothetical protein | - |
| E3S96_RS00255 () | 41532..42461 | - | 930 | WP_024937195.1 | manganese-dependent inorganic pyrophosphatase | - |
| E3S96_RS00260 () | 42514..43074 | - | 561 | WP_000149686.1 | hypothetical protein | VF |
| E3S96_RS00265 () | 43446..44543 | + | 1098 | WP_000275721.1 | pectate lyase | - |
| E3S96_RS00270 () | 44748..46310 | + | 1563 | WP_033858917.1 | SLC13 family permease | - |
| E3S96_RS00275 () | 46321..46428 | - | 108 | WP_031785526.1 | hypothetical protein | - |
| E3S96_RS00280 () | 46500..47294 | - | 795 | WP_001177820.1 | prephenate dehydratase | - |
| E3S96_RS00285 () | 47314..48390 | - | 1077 | WP_000898869.1 | nitric oxide synthase oxygenase | - |
| E3S96_RS00290 () | 48574..50043 | + | 1470 | WP_000284427.1 | nicotinate phosphoribosyltransferase | - |
| E3S96_RS00295 () | 50036..50857 | + | 822 | WP_000164017.1 | ammonia-dependent NAD(+) synthetase | - |
| E3S96_RS00300 () | 51128..51730 | + | 603 | WP_000011542.1 | DUF2179 domain-containing protein | - |
| E3S96_RS00305 () | 51711..51884 | + | 174 | WP_000669865.1 | NETI motif-containing protein | - |
| E3S96_RS00310 () | 52175..52501 | - | 327 | WP_000434537.1 | staphostatin A | - |
| E3S96_RS00315 () | 52532..53698 | - | 1167 | WP_000827739.1 | hypothetical protein | VF |
| E3S96_RS00320 () | 54545..55840 | + | 1296 | WP_000572878.1 | adenylosuccinate lyase | - |
| E3S96_RS00325 () | 55949..56251 | + | 303 | WP_001165363.1 | hypothetical protein | - |
| E3S96_RS00330 () | 56423..57115 | + | 693 | WP_000272062.1 | heptaprenylglyceryl phosphate synthase | - |
| E3S96_RS00335 () | 57112..59304 | + | 2193 | WP_000992924.1 | DNA helicase PcrA | - |
| E3S96_RS00340 () | 59308..61311 | + | 2004 | WP_000774567.1 | NAD-dependent DNA ligase LigA | - |
| E3S96_RS00345 () | 61324..62523 | + | 1200 | WP_000831695.1 | CamS family sex pheromone protein | - |
| E3S96_RS00350 () | 62612..64150 | - | 1539 | WP_000957019.1 | sodium/proline symporter PutP | - |
| E3S96_RS00355 () | 64517..64819 | + | 303 | WP_000170162.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| E3S96_RS00360 () | 64821..66278 | + | 1458 | WP_000027926.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA | - |
| E3S96_RS00365 () | 66291..67718 | + | 1428 | WP_000545370.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | - |
| E3S96_RS00370 () | 67757..67903 | + | 147 | WP_001791535.1 | hypothetical protein | - |
| E3S96_RS00375 () | 68370..69317 | + | 948 | WP_001231459.1 | diacylglycerol kinase | - |
| E3S96_RS00380 () | 69398..70759 | + | 1362 | WP_001147862.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| E3S96_RS00385 () | 70929..71459 | + | 531 | WP_000548781.1 | DUF3267 domain-containing protein | - |
| E3S96_RS00390 () | 71706..72776 | + | 1071 | WP_000140176.1 | DNA polymerase IV | - |
| E3S96_RS00395 () | 72843..73397 | - | 555 | WP_000613738.1 | 3'-5' exonuclease | - |
| E3S96_RS00400 () | 73614..73706 | + | 93 | WP_031785525.1 | hypothetical protein | - |
| E3S96_RS00405 () | 73788..74288 | - | 501 | WP_000949468.1 | H-type ferritin FtnA | - |
| E3S96_RS00410 () | 74580..75893 | + | 1314 | WP_001250325.1 | lipid II isoglutaminyl synthase subunit MurT | - |
| E3S96_RS00415 () | 75895..76626 | + | 732 | WP_160190509.1 | type 1 glutamine amidotransferase | - |
| E3S96_RS00420 () | 76712..76821 | + | 110 | Protein_83 | hypothetical protein | - |
| E3S96_RS00425 () | 76850..77263 | + | 414 | WP_001622129.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|