NZ_CP0476944483093..4675957

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 192865 bp
Accession: NZ_CP047694        Location: 4483093..4675957         Organism: Marinomonas mediterranea strain MMB-3 (CPR1)       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GV055_RS20535 (GV055_20480) 4478461..4479429 - 969 WP_272641873.1 carbohydrate kinase -
GV055_RS20540 (GV055_20485) 4479621..4480361 + 741 WP_272641874.1 response regulator transcription factor -
GV055_RS20545 (GV055_20490) 4480345..4481799 + 1455 WP_013663153.1 ATP-binding protein -
GV055_RS20550 (GV055_20495) 4481796..4483511 - 1716 WP_041649054.1 EAL domain-containing protein -
GV055_RS20555 (GV055_20500) 4483997..4485247 + 1251 WP_013663155.1 ABC transporter substrate-binding protein -
GV055_RS20560 (GV055_20505) 4485496..4486425 + 930 WP_013663156.1 sugar ABC transporter permease -
GV055_RS20565 (GV055_20510) 4486418..4487299 + 882 WP_013663157.1 carbohydrate ABC transporter permease -
GV055_RS20570 (GV055_20515) 4487400..4488509 + 1110 WP_013663158.1 Trehalose import ATP-binding protein SugC VF
GV055_RS20575 (GV055_20520) 4488967..4490424 + 1458 WP_013663159.1 benzaldehyde dehydrogenase -
GV055_RS20580 (GV055_20525) 4490689..4492299 + 1611 WP_013663160.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA -
GV055_RS20585 (GV055_20530) 4492541..4493530 - 990 WP_013663161.1 alpha/beta hydrolase -
GV055_RS20590 (GV055_20535) 4493776..4494306 - 531 WP_013663162.1 hypothetical protein -
GV055_RS20595 (GV055_20540) 4494575..4495300 - 726 WP_013663163.1 ribonuclease PH -
GV055_RS20600 (GV055_20545) 4495455..4496321 + 867 WP_272641875.1 YicC/YloC family endoribonuclease -
GV055_RS20605 4496697..4497032 + 336 WP_272641876.1 Fic/DOC family N-terminal domain-containing protein -
GV055_RS20610 (GV055_20555) 4497177..4498181 - 1005 WP_272641877.1 SEC-C domain-containing protein -
GV055_RS20615 (GV055_20560) 4498193..4499548 - 1356 WP_272641878.1 type II toxin-antitoxin system HipA family toxin -
GV055_RS20620 (GV055_20565) 4499538..4499828 - 291 WP_272642979.1 helix-turn-helix transcriptional regulator -
GV055_RS20625 (GV055_20570) 4500627..4503647 + 3021 WP_272641879.1 ATP-binding protein -
GV055_RS20630 (GV055_20575) 4503644..4505527 + 1884 WP_272641880.1 response regulator receiver domain -
GV055_RS20635 (GV055_20580) 4505520..4506689 - 1170 WP_272641881.1 DNA cytosine methyltransferase -
GV055_RS20640 (GV055_20590) 4507889..4508629 + 741 WP_272641882.1 class I SAM-dependent methyltransferase -
GV055_RS20645 (GV055_20595) 4508656..4509579 - 924 WP_272641883.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
GV055_RS20650 (GV055_20600) 4509572..4510363 - 792 WP_272641884.1 type IV toxin-antitoxin system AbiEi family antitoxin Antitoxin Detail
GV055_RS20655 (GV055_20605) 4510576..4512348 - 1773 WP_272641885.1 diguanylate cyclase -
GV055_RS20660 (GV055_20610) 4512527..4513249 - 723 WP_041649062.1 RNA methyltransferase -
GV055_RS20665 (GV055_20615) 4513438..4514058 + 621 WP_013663175.1 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE -
GV055_RS20670 (GV055_20620) 4514163..4515230 + 1068 WP_013663176.1 23S rRNA pseudouridine(2604) synthase RluF -
GV055_RS20675 4515611..4515745 + 135 WP_263053291.1 hypothetical protein -
GV055_RS20680 (GV055_20630) 4515787..4516773 + 987 WP_041648048.1 IS256 family transposase IS1310 Transposase
GV055_RS20685 (GV055_20635) 4516829..4517284 - 456 Protein_4020 IS5 family transposase -
GV055_RS20690 (GV055_20640) 4517371..4518111 - 741 WP_013663177.1 thioesterase domain-containing protein -
GV055_RS20695 (GV055_20645) 4518237..4518527 - 291 WP_013663178.1 antibiotic biosynthesis monooxygenase -
GV055_RS20700 (GV055_20650) 4518584..4519573 - 990 WP_013663179.1 aldo/keto reductase -
GV055_RS20705 (GV055_20655) 4519588..4520253 - 666 WP_013663180.1 glutathione S-transferase family protein -
GV055_RS20710 (GV055_20660) 4520250..4521440 - 1191 WP_272641886.1 MFS transporter -
GV055_RS20715 (GV055_20665) 4521443..4522309 - 867 WP_272641887.1 hypothetical protein -
GV055_RS20720 (GV055_20670) 4522328..4523002 - 675 WP_013663183.1 HAD-IB family hydrolase -
GV055_RS20725 (GV055_20675) 4523018..4523725 - 708 WP_013663184.1 AfsA-related hotdog domain-containing protein -
GV055_RS20730 (GV055_20680) 4523788..4529067 - 5280 WP_272641888.1 Phthiocerol synthesis polyketide synthase type I PpsD VF
GV055_RS20735 4529907..4530035 + 129 WP_272641889.1 IS30 family transposase ISSba16 Transposase
GV055_RS20740 (GV055_20685) 4530089..4530916 - 828 WP_263053293.1 IS66 family transposase ISPpu13 Transposase
GV055_RS20745 4530892..4531191 - 300 WP_272641890.1 IS66 family transposase ISAeh1 Transposase
GV055_RS20750 (GV055_20690) 4531188..4531352 - 165 WP_190273412.1 hypothetical protein -
GV055_RS20755 4531572..4531982 + 411 Protein_4034 IS30 family transposase -
GV055_RS20760 (GV055_20695) 4532049..4532660 - 612 WP_272641891.1 Crp/Fnr family transcriptional regulator -
GV055_RS20765 4533859..4534002 + 144 Protein_4036 IS5/IS1182 family transposase -
GV055_RS20770 4534166..4534369 - 204 WP_272641892.1 hypothetical protein -
GV055_RS20775 4534522..4534710 - 189 WP_190273413.1 hypothetical protein -
GV055_RS20780 (GV055_20710) 4534946..4536199 - 1254 WP_013663187.1 FAD-dependent oxidoreductase -
GV055_RS20785 (GV055_20715) 4536211..4536531 - 321 WP_013663188.1 2Fe-2S iron-sulfur cluster-binding protein -
GV055_RS20790 (GV055_20720) 4536554..4537132 - 579 WP_272641893.1 carboxymuconolactone decarboxylase family protein -
GV055_RS20795 (GV055_20725) 4537394..4538524 + 1131 WP_272641894.1 alpha/beta fold hydrolase -
GV055_RS20800 (GV055_20730) 4538521..4539753 + 1233 WP_013663191.1 hypothetical protein VF
GV055_RS20805 (GV055_20735) 4539817..4540695 + 879 WP_272641895.1 sulfite exporter TauE/SafE family protein -
GV055_RS20810 (GV055_20740) 4540710..4541852 + 1143 WP_272641896.1 acyl-CoA dehydrogenase family protein -
GV055_RS20815 (GV055_20745) 4541849..4543378 + 1530 WP_272641897.1 amino acid adenylation domain-containing protein -
GV055_RS20820 (GV055_20750) 4543458..4545008 + 1551 WP_272641898.1 NAD(P)-binding domain-containing protein -
GV055_RS20825 (GV055_20755) 4545062..4545691 + 630 WP_272641899.1 chorismate pyruvate-lyase family protein -
GV055_RS20830 (GV055_20760) 4545678..4547165 + 1488 WP_272641900.1 cytochrome P450 -
GV055_RS20835 (GV055_20765) 4547243..4547896 - 654 WP_049787798.1 HTH-type quorum sensing-dependent transcriptional regulator RpaR VF
GV055_RS20840 (GV055_20770) 4548480..4551626 - 3147 WP_013663199.1 efflux RND transporter permease subunit -
GV055_RS20845 (GV055_20775) 4551623..4552984 - 1362 WP_013663200.1 HlyD family secretion protein -
GV055_RS20850 (GV055_20780) 4552959..4553609 - 651 WP_013663201.1 TetR/AcrR family transcriptional regulator -
GV055_RS20855 (GV055_20785) 4554396..4555982 + 1587 WP_272641901.1 pilus assembly protein -
GV055_RS20860 (GV055_20790) 4556023..4561041 + 5019 WP_272641902.1 beta-propeller fold lactonase family protein -
GV055_RS20865 (GV055_20795) 4561076..4562770 + 1695 WP_272641903.1 TolC family protein -
GV055_RS20870 (GV055_20800) 4562767..4563582 + 816 WP_013663205.1 efflux RND transporter periplasmic adaptor subunit -
GV055_RS20875 (GV055_20805) 4563579..4564928 + 1350 WP_113916221.1 HlyD family efflux transporter periplasmic adaptor subunit -
GV055_RS20880 (GV055_20810) 4564935..4567055 + 2121 WP_013663207.1 HlyD family efflux transporter periplasmic adaptor subunit -
GV055_RS20885 (GV055_20815) 4567052..4568428 - 1377 WP_013663208.1 HAMP domain-containing sensor histidine kinase -
GV055_RS20890 (GV055_20820) 4568432..4569097 - 666 WP_013663209.1 Transcriptional activator protein CzcR VF
GV055_RS20895 (GV055_20825) 4569477..4569674 + 198 WP_013663210.1 hypothetical protein VF
GV055_RS20900 (GV055_20830) 4569691..4570239 + 549 WP_013663211.1 prepilin peptidase -
GV055_RS20905 (GV055_20835) 4570258..4571205 + 948 WP_272641904.1 Flp pilus assembly protein CpaB -
GV055_RS20910 (GV055_20840) 4571253..4572647 + 1395 WP_272641905.1 Type II secretion system protein D VF
GV055_RS20915 (GV055_20845) 4572664..4573338 + 675 WP_013663214.1 CpaD family pilus assembly protein -
GV055_RS20920 (GV055_20850) 4573354..4574598 + 1245 WP_013663215.1 response regulator -
GV055_RS20925 (GV055_20855) 4574595..4575962 + 1368 WP_272641906.1 Putative conjugal transfer protein VF
GV055_RS20930 (GV055_20860) 4575963..4576946 + 984 WP_272641907.1 hypothetical protein VF
GV055_RS20935 (GV055_20865) 4576943..4577893 + 951 WP_272641908.1 hypothetical protein VF
GV055_RS20940 (GV055_20870) 4577896..4578783 + 888 WP_272641909.1 tetratricopeptide repeat protein -
GV055_RS20945 (GV055_20875) 4578783..4579268 + 486 WP_272641910.1 pilus assembly protein -
GV055_RS20950 (GV055_20880) 4579268..4579831 + 564 WP_272641911.1 pilus assembly protein -
GV055_RS20955 (GV055_20885) 4579871..4580218 + 348 WP_223294995.1 YbaN family protein -
GV055_RS20960 (GV055_20890) 4580320..4580910 + 591 WP_013663223.1 biliverdin-producing heme oxygenase -
GV055_RS20965 (GV055_20895) 4581037..4581927 - 891 WP_013663224.1 alpha/beta hydrolase -
GV055_RS20970 (GV055_20900) 4582163..4582663 - 501 WP_272641912.1 hypothetical protein -
GV055_RS20975 (GV055_20905) 4582832..4583701 - 870 WP_272641913.1 AraC family transcriptional regulator -
GV055_RS20980 (GV055_20910) 4584041..4585264 + 1224 WP_272641914.1 MFS transporter -
GV055_RS20985 (GV055_20915) 4585347..4585973 + 627 WP_013663228.1 guanylate kinase -
GV055_RS20990 (GV055_20920) 4586031..4586258 + 228 WP_013663229.1 DNA-directed RNA polymerase subunit omega -
GV055_RS20995 (GV055_20925) 4586325..4588436 + 2112 WP_272641915.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
GV055_RS21000 (GV055_20930) 4588471..4588857 + 387 WP_013663231.1 RidA family protein -
GV055_RS21005 (GV055_20935) 4588966..4589841 - 876 WP_272641916.1 NAD-dependent epimerase/dehydratase family protein -
GV055_RS21010 (GV055_20940) 4589943..4590851 + 909 WP_013663233.1 Hydrogen peroxide-inducible genes activator VF
GV055_RS21015 (GV055_20945) 4590895..4593027 + 2133 WP_272642980.1 ATP-dependent DNA helicase RecG -
GV055_RS21020 (GV055_20950) 4593216..4594022 + 807 WP_272641917.1 helix-hairpin-helix domain-containing protein -
GV055_RS21025 (GV055_20955) 4594161..4594637 - 477 WP_013663236.1 Lrp/AsnC ligand binding domain-containing protein -
GV055_RS21030 (GV055_20960) 4595220..4596242 + 1023 WP_013663237.1 amino acid ABC transporter substrate-binding protein -
GV055_RS21035 (GV055_20965) 4596376..4597548 + 1173 WP_013663238.1 amino acid ABC transporter permease -
GV055_RS21040 (GV055_20970) 4597562..4598662 + 1101 WP_013663239.1 amino acid ABC transporter permease -
GV055_RS21045 (GV055_20975) 4598687..4599466 + 780 WP_013663240.1 Glutamine transport ATP-binding protein GlnQ VF
GV055_RS21050 (GV055_20980) 4599578..4600846 + 1269 WP_013663241.1 HDOD domain-containing protein -
GV055_RS21055 (GV055_20985) 4600843..4601382 + 540 WP_013663242.1 chorismate lyase -
GV055_RS21060 (GV055_20990) 4601482..4602336 + 855 WP_272641918.1 4-hydroxybenzoate octaprenyltransferase -
GV055_RS21065 (GV055_20995) 4602455..4603150 + 696 WP_013663244.1 Phosphate regulon transcriptional regulatory protein PhoB VF
GV055_RS21070 (GV055_21000) 4603187..4604506 + 1320 WP_013663245.1 phosphate regulon sensor histidine kinase PhoR -
GV055_RS21075 (GV055_21005) 4604659..4605525 - 867 WP_013663246.1 Chemotaxis protein CheY VF
GV055_RS21080 (GV055_21010) 4605575..4606348 - 774 WP_013663247.1 sulfate transporter CysZ -
GV055_RS21085 (GV055_21015) 4606341..4606562 + 222 WP_041648052.1 hypothetical protein -
GV055_RS21090 4606658..4607131 + 474 WP_049787799.1 ABC transporter substrate-binding protein -
GV055_RS21095 4607207..4607980 + 774 WP_223295067.1 ABC transporter substrate-binding protein -
GV055_RS21100 (GV055_21025) 4608255..4609877 + 1623 WP_272641919.1 ABC transporter substrate-binding protein -
GV055_RS21105 (GV055_21030) 4610003..4610923 + 921 WP_013663249.1 oligopeptide ABC transporter permease OppB -
GV055_RS21110 (GV055_21035) 4610935..4611861 + 927 WP_272641920.1 oligopeptide ABC transporter permease OppC -
GV055_RS21115 (GV055_21040) 4611871..4612845 + 975 WP_272641921.1 ABC transporter ATP-binding protein -
GV055_RS21120 (GV055_21045) 4612842..4613864 + 1023 WP_013663252.1 murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF -
GV055_RS21125 (GV055_21050) 4614003..4614314 - 312 WP_272641922.1 SemiSWEET transporter -
GV055_RS21130 (GV055_21055) 4614577..4615104 + 528 WP_013663254.1 molybdopterin-dependent oxidoreductase -
GV055_RS21135 (GV055_21060) 4615126..4616967 + 1842 WP_272641923.1 ATP-binding protein -
GV055_RS21140 (GV055_21065) 4616973..4617353 + 381 WP_013663256.1 Hpt domain-containing protein -
GV055_RS21145 (GV055_21070) 4617464..4617964 - 501 WP_013663257.1 GAF domain-containing protein -
GV055_RS21150 (GV055_21075) 4618254..4618970 - 717 WP_013663258.1 phosphate signaling complex protein PhoU -
GV055_RS21155 (GV055_21080) 4618988..4619818 - 831 WP_272641924.1 Phosphate import ATP-binding protein PstB 3 VF
GV055_RS21160 (GV055_21085) 4619840..4621552 - 1713 WP_223294996.1 phosphate ABC transporter permease PstA -
GV055_RS21165 (GV055_21090) 4621552..4623810 - 2259 WP_272641925.1 ABC transporter permease subunit -
GV055_RS21170 (GV055_21095) 4623926..4624894 - 969 WP_013663262.1 phosphate ABC transporter substrate-binding protein PstS family protein -
GV055_RS21175 (GV055_21100) 4625242..4628223 + 2982 WP_013663263.1 putative signaling protein VF
GV055_RS21180 (GV055_21105) 4628468..4628986 + 519 WP_013663264.1 TRAP transporter small permease subunit -
GV055_RS21185 (GV055_21110) 4628990..4630381 + 1392 WP_272641926.1 TRAP transporter large permease subunit -
GV055_RS21190 (GV055_21115) 4630522..4631484 + 963 WP_272641927.1 NADPH:quinone reductase -
GV055_RS21195 (GV055_21120) 4631647..4631949 + 303 WP_013663267.1 antibiotic biosynthesis monooxygenase -
GV055_RS21200 (GV055_21125) 4632081..4632854 + 774 WP_013663268.1 HTH-type transcriptional activator RhaS VF
GV055_RS21205 (GV055_21130) 4633220..4636342 + 3123 WP_013663269.1 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA -
GV055_RS21210 (GV055_21135) 4636368..4637054 + 687 WP_013663270.1 1-pyrroline-5-carboxylate dehydrogenase -
GV055_RS21215 (GV055_21140) 4637123..4638070 - 948 WP_013663271.1 Phytochrome-like protein cph2 VF
GV055_RS21220 (GV055_21145) 4638078..4644803 - 6726 WP_272641928.1 response regulator -
GV055_RS21225 (GV055_21150) 4645046..4647202 + 2157 WP_272641929.1 NAD(P)-binding protein -
GV055_RS21230 (GV055_21155) 4647303..4648415 - 1113 WP_272641930.1 TRAP transporter substrate-binding protein DctP -
GV055_RS21235 (GV055_21160) 4648668..4649798 - 1131 WP_013663275.1 TRAP transporter substrate-binding protein DctP -
GV055_RS21240 (GV055_21165) 4650188..4650868 - 681 WP_013663276.1 NAD(P)-binding domain-containing protein -
GV055_RS21245 (GV055_21170) 4651099..4652649 - 1551 WP_272641931.1 MFS transporter -
GV055_RS21250 (GV055_21175) 4652918..4653778 + 861 WP_013663278.1 LysR family transcriptional regulator -
GV055_RS21255 (GV055_21180) 4653999..4656209 - 2211 WP_272641932.1 DNA helicase II -
GV055_RS21260 (GV055_21185) 4656377..4656565 + 189 WP_013663280.1 hypothetical protein -
GV055_RS21265 (GV055_21190) 4656997..4658193 + 1197 WP_272641933.1 amino acid aminotransferase -
GV055_RS21270 (GV055_21195) 4658343..4658981 + 639 WP_272641934.1 DsbA family protein -
GV055_RS21275 (GV055_21200) 4659151..4659645 + 495 Protein_4138 IS481 family transposase ISSde2 Transposase
GV055_RS21280 (GV055_21205) 4659721..4660491 - 771 WP_272641935.1 hypothetical protein -
GV055_RS21285 4661034..4661201 - 168 WP_272641936.1 hypothetical protein -
GV055_RS21290 (GV055_21215) 4661521..4661691 - 171 WP_272641937.1 hypothetical protein -
GV055_RS21295 (GV055_21220) 4662145..4662297 - 153 Protein_4142 IS110 family transposase -
GV055_RS21300 (GV055_21225) 4662578..4662868 + 291 WP_272641938.1 hypothetical protein -
GV055_RS21305 (GV055_21230) 4663244..4664473 - 1230 WP_272641939.1 aminotransferase class V-fold PLP-dependent enzyme -
GV055_RS21310 (GV055_21235) 4664512..4666524 - 2013 WP_272641940.1 GntR family transcriptional regulator -
GV055_RS21315 (GV055_21240) 4666781..4667995 + 1215 WP_272641941.1 cysteine desulfurase -
GV055_RS21320 (GV055_21245) 4668026..4668430 + 405 WP_272641942.1 SufE family protein -
GV055_RS21325 (GV055_21250) 4668465..4669385 - 921 WP_272641943.1 hypothetical protein -
GV055_RS21330 (GV055_21255) 4669379..4669567 - 189 WP_013663291.1 hypothetical protein -
GV055_RS21335 (GV055_21260) 4669554..4669925 - 372 WP_272641944.1 phage tail protein -
GV055_RS21340 (GV055_21265) 4669925..4671943 - 2019 WP_272641945.1 hypothetical protein -
GV055_RS21345 (GV055_21270) 4672081..4672332 - 252 WP_013663294.1 phage tail assembly protein -
GV055_RS21350 (GV055_21275) 4672545..4673042 - 498 WP_272641946.1 phage major tail tube protein -
GV055_RS21355 (GV055_21280) 4673045..4674139 - 1095 WP_272641947.1 phage tail protein -
GV055_RS21360 (GV055_21285) 4674152..4674613 - 462 WP_013663297.1 hypothetical protein -
GV055_RS21365 (GV055_21290) 4674613..4675413 - 801 WP_013663298.1 hypothetical protein -
GV055_RS21370 (GV055_21295) 4675410..4675919 - 510 WP_013663299.1 hypothetical protein -
GV055_RS21375 (GV055_21300) 4675907..4676479 - 573 WP_272641948.1 phage tail protein I -
GV055_RS21380 (GV055_21305) 4676476..4677288 - 813 WP_272641949.1 baseplate J/gp47 family protein -
GV055_RS21385 (GV055_21310) 4677285..4677596 - 312 WP_272641950.1 GPW/gp25 family protein -
GV055_RS21390 (GV055_21315) 4677593..4678132 - 540 WP_013663303.1 phage baseplate assembly protein V -
GV055_RS21395 (GV055_21320) 4678319..4678780 + 462 WP_013663304.1 hypothetical protein -
GV055_RS21400 (GV055_21325) 4678783..4679025 + 243 WP_013663305.1 hypothetical protein -
GV055_RS21405 (GV055_21330) 4679281..4679484 - 204 WP_013663307.1 hypothetical protein -
GV055_RS21410 (GV055_21335) 4679547..4679975 - 429 WP_272641951.1 lysozyme -
GV055_RS21415 (GV055_21340) 4680170..4680850 + 681 WP_272641952.1 XRE family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance