MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86371 bp
Accession: NZ_CP047672 Location: 1..86371 Organism: Edwardsiella piscicida strain CK41 Replicon: plasmid pCK41
Accession: NZ_CP047672 Location: 1..86371 Organism: Edwardsiella piscicida strain CK41 Replicon: plasmid pCK41
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT752_RS17390 | 490..948 | + | 459 | Protein_0 | hypothetical protein | - |
| GT752_RS17395 | 1129..1629 | + | 501 | WP_252977053.1 | hypothetical protein | - |
| GT752_RS17400 | 1708..2142 | + | 435 | WP_252977054.1 | Type IV secretion system protein virB4 | VF |
| GT752_RS17405 (GT752_17230) | 2280..2997 | + | 718 | Protein_3 | type IV secretion system protein | - |
| GT752_RS17410 (GT752_17235) | 3009..3242 | + | 234 | WP_252977055.1 | EexN family lipoprotein | - |
| GT752_RS17415 (GT752_17240) | 3399..4313 | + | 915 | WP_252977056.1 | type IV secretion system protein | - |
| GT752_RS17420 | 4389..4529 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| GT752_RS17425 (GT752_17245) | 4522..5198 | + | 677 | Protein_7 | type IV secretion system protein | - |
| GT752_RS17430 (GT752_17250) | 5199..6090 | + | 892 | Protein_8 | P-type conjugative transfer protein VirB9 | - |
| GT752_RS17435 (GT752_17255) | 6087..7282 | + | 1196 | Protein_9 | Type IV secretion system protein virB10 | VF |
| GT752_RS17440 (GT752_17260) | 7286..8335 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| GT752_RS17445 (GT752_17265) | 8322..8723 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| GT752_RS17450 (GT752_17270) | 8814..9131 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| GT752_RS17455 (GT752_17275) | 9158..9493 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| GT752_RS17460 (GT752_17280) | 9469..9777 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| GT752_RS17465 (GT752_17285) | 9774..11974 | + | 2201 | Protein_15 | DNA topoisomerase | - |
| GT752_RS17470 (GT752_17290) | 11971..12363 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| GT752_RS17475 (GT752_17295) | 13072..14979 | + | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| GT752_RS17480 (GT752_17300) | 14994..15740 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| GT752_RS17485 (GT752_17305) | 15733..16260 | + | 528 | WP_001232861.1 | Phospholipase D | VF |
| GT752_RS17490 (GT752_17310) | 16292..16723 | - | 432 | WP_001531161.1 | hypothetical protein | - |
| GT752_RS17495 (GT752_17315) | 17203..18168 | - | 966 | WP_000178515.1 | zincin-like metallopeptidase domain-containing protein | - |
| GT752_RS17500 (GT752_17320) | 18622..19842 | - | 1221 | Protein_22 | ISL3 family transposase ISKox3 | Transposase |
| GT752_RS17505 (GT752_17325) | 19943..20368 | + | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GT752_RS17510 (GT752_17330) | 20368..21639 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| GT752_RS17515 (GT752_17335) | 21718..21969 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| GT752_RS17520 | 22023..22706 | + | 684 | WP_238828251.1 | hypothetical protein | - |
| GT752_RS17525 (GT752_17350) | 23404..24375 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GT752_RS17530 (GT752_17355) | 24375..25541 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| GT752_RS17535 (GT752_17360) | 26282..27292 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| GT752_RS17540 (GT752_17365) | 28104..28427 | - | 324 | Protein_30 | lipocalin family protein | - |
| GT752_RS17545 (GT752_17370) | 28545..29270 | + | 726 | WP_000331736.1 | IS607 family transposase ISAfe11 | Transposase |
| GT752_RS17550 (GT752_17375) | 29370..29780 | + | 411 | WP_000750474.1 | hydroxyisourate hydrolase | - |
| GT752_RS17555 (GT752_17380) | 29883..30842 | + | 960 | WP_000208727.1 | DUF523 and DUF1722 domain-containing protein | - |
| GT752_RS17560 (GT752_17385) | 30988..32076 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| GT752_RS17565 (GT752_17390) | 32139..32843 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| GT752_RS17570 (GT752_17395) | 33107..34180 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| GT752_RS17575 | 34224..34373 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| GT752_RS17580 (GT752_17400) | 34580..34690 | - | 111 | Protein_38 | hypothetical protein | - |
| GT752_RS17585 (GT752_17405) | 34715..34954 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GT752_RS17590 (GT752_17410) | 34954..35241 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GT752_RS17595 (GT752_17415) | 35545..36327 | - | 783 | WP_001531258.1 | IS21 family transposase ISSen3 | Transposase |
| GT752_RS17600 (GT752_17420) | 36324..37346 | - | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| GT752_RS17605 (GT752_17425) | 37485..37709 | + | 225 | Protein_43 | hypothetical protein | - |
| GT752_RS17610 (GT752_17430) | 38146..40353 | + | 2208 | WP_001162839.1 | AAA family ATPase | - |
| GT752_RS17615 (GT752_17435) | 40356..42938 | + | 2583 | WP_000449742.1 | nuclease domain-containing protein | - |
| GT752_RS17620 (GT752_17440) | 42984..43241 | - | 258 | Protein_46 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GT752_RS17630 (GT752_17450) | 44908..45885 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| GT752_RS17635 (GT752_17455) | 46077..46434 | + | 358 | Protein_49 | IS1 family transposase | - |
| GT752_RS17640 (GT752_17460) | 46957..48708 | - | 1752 | Protein_50 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GT752_RS17645 (GT752_17465) | 48712..49104 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| GT752_RS17650 (GT752_17470) | 49242..50126 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| GT752_RS17655 (GT752_17475) | 50158..51357 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| GT752_RS17660 (GT752_17480) | 51463..52113 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GT752_RS17665 (GT752_17485) | 52145..52387 | - | 243 | WP_000844627.1 | transposase | - |
| GT752_RS17670 (GT752_17490) | 52445..53215 | - | 771 | Protein_56 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GT752_RS17675 | 53322..53423 | - | 102 | Protein_57 | hypothetical protein | - |
| GT752_RS17680 (GT752_17495) | 53458..56430 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| GT752_RS17685 (GT752_17500) | 56433..56990 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GT752_RS17690 (GT752_17505) | 57296..58309 | - | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| GT752_RS17695 (GT752_17510) | 58454..58951 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| GT752_RS17700 (GT752_17515) | 59063..59353 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| GT752_RS17705 (GT752_17520) | 59359..60197 | + | 839 | Protein_63 | Streptomycin 3''-adenylyltransferase | ARG |
| GT752_RS17710 (GT752_17525) | 60314..60661 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GT752_RS17715 (GT752_17530) | 60655..61494 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GT752_RS17720 (GT752_17535) | 61622..62122 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| GT752_RS17725 (GT752_17540) | 62091..63083 | - | 993 | WP_001381192.1 | TniB family NTP-binding protein | - |
| GT752_RS17730 (GT752_17545) | 63086..63520 | - | 435 | Protein_68 | Mu transposase C-terminal domain-containing protein | - |
| GT752_RS17735 (GT752_17550) | 63574..64278 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GT752_RS17740 (GT752_17555) | 64429..65244 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GT752_RS17745 (GT752_17560) | 65434..66138 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GT752_RS17750 (GT752_17565) | 66355..68073 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| GT752_RS17755 (GT752_17570) | 68070..68558 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| GT752_RS17760 (GT752_17575) | 68551..69534 | - | 984 | WP_001245143.1 | hypothetical protein | - |
| GT752_RS17765 (GT752_17580) | 69538..70452 | - | 915 | WP_013438818.1 | helix-turn-helix domain-containing protein | - |
| GT752_RS17770 (GT752_17585) | 70766..71074 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| GT752_RS17775 (GT752_17590) | 71067..71282 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| GT752_RS17780 (GT752_17595) | 71285..71947 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| GT752_RS17785 (GT752_17600) | 71958..72257 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| GT752_RS17790 (GT752_17605) | 72267..75017 | + | 2751 | WP_000153996.1 | Type IV secretion system protein virB4 | VF |
| GT752_RS17795 (GT752_17610) | 75036..75752 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| GT752_RS17800 (GT752_17615) | 75764..76048 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| GT752_RS17805 (GT752_17620) | 76155..77072 | + | 918 | WP_225280912.1 | type IV secretion system protein | - |
| GT752_RS17810 | 77149..77289 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| GT752_RS17815 (GT752_17625) | 77282..77968 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| GT752_RS17820 (GT752_17630) | 77961..78854 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| GT752_RS17825 (GT752_17635) | 78851..80045 | + | 1195 | Protein_87 | hypothetical protein | - |
| GT752_RS17830 (GT752_17640) | 80049..81097 | + | 1049 | Protein_88 | Type IV secretion system protein VirB11 | VF |
| GT752_RS17835 (GT752_17645) | 81084..81485 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| GT752_RS17840 (GT752_17650) | 81576..81893 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| GT752_RS17845 (GT752_17655) | 81920..82255 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| GT752_RS17850 (GT752_17660) | 82231..82539 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| GT752_RS17855 (GT752_17665) | 82536..84726 | + | 2191 | Protein_93 | DNA topoisomerase | - |
| GT752_RS17860 | 84731..84922 | + | 192 | WP_252977052.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|