MGE detailed information
MGE type: Conjugative plasmid MGE length: 135123 bp
Accession: NZ_CP047667 Location: 1..135123 Organism: Escherichia coli strain LD26-1 Replicon: plasmid pLD26-1-135kb
Accession: NZ_CP047667 Location: 1..135123 Organism: Escherichia coli strain LD26-1 Replicon: plasmid pLD26-1-135kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU86_RS24200 () | 1..225 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| GUU86_RS24205 () | 222..959 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GUU86_RS24210 () | 1445..1585 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| GUU86_RS24215 () | 1591..2295 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GUU86_RS24220 () | 2418..2819 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GUU86_RS24225 () | 2752..3009 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GUU86_RS24230 () | 3102..3755 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| GUU86_RS24235 () | 4695..5552 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| GUU86_RS24240 () | 5545..5619 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| GUU86_RS24245 () | 5845..6105 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| GUU86_RS24250 () | 6344..6917 | - | 574 | Protein_10 | DUF2726 domain-containing protein | - |
| GUU86_RS24255 () | 6955..7164 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| GUU86_RS24260 () | 7210..7671 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| GUU86_RS24265 () | 7914..8126 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| GUU86_RS24270 () | 8264..8824 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| GUU86_RS24275 () | 8879..9625 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| GUU86_RS24280 () | 9645..14915 | - | 5271 | WP_072769080.1 | Multifunctional conjugation protein TraI | Relaxase |
| GUU86_RS24285 () | 14915..17158 | - | 2244 | WP_104211547.1 | type IV conjugative transfer system coupling protein TraD | - |
| GUU86_RS24290 () | 17411..18142 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| GUU86_RS24295 () | 18174..18677 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| GUU86_RS24300 () | 18692..21514 | - | 2823 | WP_001007026.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GUU86_RS24305 () | 21511..22884 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| GUU86_RS24310 () | 22884..23246 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| GUU86_RS24315 () | 23176..23721 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GUU86_RS24320 () | 23708..23992 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GUU86_RS24325 () | 24111..24458 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| GUU86_RS24330 () | 24474..25217 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GUU86_RS24335 () | 25210..25467 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| GUU86_RS24340 () | 25494..27302 | - | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GUU86_RS24345 () | 27299..27937 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GUU86_RS24350 () | 27965..28291 | - | 327 | Protein_30 | hypothetical protein | - |
| GUU86_RS24360 () | 29575..29730 | - | 156 | WP_160183924.1 | hypothetical protein | - |
| GUU86_RS24365 () | 29760..30221 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| GUU86_RS24370 () | 30247..31239 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| GUU86_RS24375 () | 31236..31868 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| GUU86_RS24380 () | 31865..32251 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| GUU86_RS24385 () | 32248..34875 | - | 2628 | WP_001064268.1 | type IV secretion system protein TraC | - |
| GUU86_RS24390 () | 35035..35256 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| GUU86_RS24395 () | 35391..35906 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GUU86_RS24400 () | 35903..36154 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| GUU86_RS24405 () | 36151..36468 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| GUU86_RS24410 () | 36465..37037 | - | 573 | WP_000002780.1 | conjugal transfer protein TraP | - |
| GUU86_RS24415 () | 37027..38454 | - | 1428 | Protein_43 | conjugal transfer protein TraB | - |
| GUU86_RS24420 () | 38454..39158 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| GUU86_RS24425 () | 39169..39735 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| GUU86_RS24430 () | 39757..40068 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GUU86_RS24435 () | 40083..40442 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| GUU86_RS24440 () | 40476..40703 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| GUU86_RS24445 () | 40797..41483 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| GUU86_RS24450 () | 41674..42057 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| GUU86_RS24455 () | 42334..42981 | + | 648 | WP_000614936.1 | hypothetical protein | VF |
| GUU86_RS24460 () | 43278..44099 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| GUU86_RS24465 () | 44221..44508 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| GUU86_RS25110 () | 44533..44739 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| GUU86_RS24475 () | 45430..45588 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 45632..45856 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45632..45856 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45632..45856 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45632..45856 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| GUU86_RS24480 () | 45668..45856 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| GUU86_RS24485 () | 45868..46587 | - | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| GUU86_RS24490 () | 46584..47018 | - | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| GUU86_RS24495 () | 47073..49031 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| GUU86_RS24500 () | 49090..49323 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| GUU86_RS24505 () | 49379..49906 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| GUU86_RS24515 () | 50379..50651 | - | 273 | WP_072133095.1 | hypothetical protein | - |
| GUU86_RS24520 () | 50803..51366 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| GUU86_RS24525 () | 51412..52773 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| GUU86_RS24530 () | 52825..53055 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| GUU86_RS25115 () | 53733..54061 | + | 329 | Protein_66 | pilus assembly protein | - |
| GUU86_RS24540 () | 54049..54231 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| GUU86_RS24545 () | 54231..54692 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| GUU86_RS24550 () | 54692..54994 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| GUU86_RS24560 () | 55519..56490 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| GUU86_RS24565 () | 56543..57240 | - | 698 | Protein_71 | IS1 family transposase | - |
| GUU86_RS24570 () | 57294..57626 | - | 333 | Protein_72 | hypothetical protein | - |
| GUU86_RS25120 () | 57695..58033 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| GUU86_RS24585 () | 58845..59816 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GUU86_RS24590 () | 59816..60982 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| GUU86_RS24595 () | 61282..61979 | - | 698 | Protein_76 | IS1 family transposase | - |
| GUU86_RS24600 () | 62035..62274 | - | 240 | Protein_77 | IS21 family transposase IS21 | Transposase |
| GUU86_RS24605 () | 62523..63736 | + | 1214 | WP_085947772.1 | IS3 family transposase ISCfr6 | Transposase |
| GUU86_RS24610 () | 64281..65258 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| GUU86_RS24615 () | 65543..66283 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| GUU86_RS24620 () | 66404..66592 | - | 189 | WP_065203495.1 | serine/threonine protein kinase | - |
| GUU86_RS24625 () | 66966..67868 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| GUU86_RS24630 () | 67937..69046 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| GUU86_RS24635 () | 69479..70432 | - | 954 | WP_000280980.1 | hypothetical protein | VF |
| GUU86_RS24640 () | 71706..71864 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| GUU86_RS24645 () | 72048..73247 | + | 1200 | Protein_86 | IS3 family transposase IS629 | Transposase |
| GUU86_RS24655 () | 73395..73720 | - | 326 | Protein_87 | IS3 family transposase ISLad1 | Transposase |
| GUU86_RS24660 () | 74701..75888 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| GUU86_RS24665 () | 75885..77825 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| GUU86_RS24670 () | 77829..79199 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| GUU86_RS24675 () | 79673..79867 | + | 195 | Protein_91 | IS200-IS605 family transposase IS200C | Transposase |
| GUU86_RS24680 () | 79996..80937 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| GUU86_RS24685 () | 81172..82561 | - | 1390 | Protein_93 | ISNCY family transposase ISKpn21 | Transposase |
| GUU86_RS24690 () | 82871..83020 | - | 150 | Protein_94 | IS3 family transposase IS2 | Transposase |
| GUU86_RS24695 () | 83198..84391 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| GUU86_RS24700 () | 85614..86850 | - | 1237 | Protein_96 | IS3 family transposase IS2 | Transposase |
| GUU86_RS24705 () | 87477..87770 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| GUU86_RS24710 () | 87828..88027 | - | 200 | Protein_98 | lysis protein | - |
| GUU86_RS24715 () | 88581..89681 | + | 1101 | Protein_99 | IS481 family transposase ISKpn28 | Transposase |
| GUU86_RS24720 () | 90917..92032 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| GUU86_RS24725 () | 92172..95831 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| GUU86_RS24730 () | 95935..97164 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| GUU86_RS24735 () | 97249..98205 | + | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
| GUU86_RS24740 () | 98250..100427 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| GUU86_RS24745 () | 100662..101359 | + | 698 | Protein_105 | IS1 family transposase | - |
| GUU86_RS24750 () | 101370..101573 | - | 204 | WP_001259759.1 | colicin V family bacteriocin | - |
| GUU86_RS24755 () | 101551..101787 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| GUU86_RS24760 () | 102251..102532 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| GUU86_RS24765 () | 102705..102872 | + | 168 | Protein_109 | colicin-B | - |
| GUU86_RS24770 () | 102890..103417 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| GUU86_RS24775 () | 103661..104476 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| GUU86_RS24780 () | 104526..104879 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| GUU86_RS24785 () | 105057..105848 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| GUU86_RS24790 () | 105845..106534 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| GUU86_RS24795 () | 106578..106928 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| GUU86_RS24800 () | 107460..111281 | - | 3822 | WP_064055658.1 | hypothetical protein | - |
| GUU86_RS25125 () | 111525..111686 | + | 162 | WP_000251882.1 | hypothetical protein | - |
| GUU86_RS24805 () | 111704..112051 | - | 348 | WP_000142450.1 | hypothetical protein | - |
| GUU86_RS24810 () | 112353..112835 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| GUU86_RS24815 () | 112952..113800 | - | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| GUU86_RS24820 () | 113846..114127 | - | 282 | WP_000969990.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GUU86_RS24825 () | 114124..114201 | - | 78 | Protein_122 | toxin-antitoxin system protein | - |
| GUU86_RS24830 () | 114234..114950 | - | 717 | Protein_123 | Tn3 family transposase | - |
| GUU86_RS24835 () | 114984..117989 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GUU86_RS24840 () | 118153..118710 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GUU86_RS24845 () | 118893..119753 | + | 861 | WP_015058868.1 | Beta-lactamase TEM | ARG |
| GUU86_RS24850 () | 119901..120248 | - | 348 | Protein_127 | IS6 family transposase IS15DII | Transposase |
| GUU86_RS24855 () | 120495..120968 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| GUU86_RS24860 () | 121124..122128 | + | 1005 | Protein_129 | IS91 family transposase ISAzo26 | Transposase |
| GUU86_RS24865 () | 122182..122886 | - | 705 | WP_086525284.1 | IS6 family transposase IS26 | Transposase |
| GUU86_RS24870 () | 122953..123569 | - | 617 | Protein_131 | transposase | - |
| GUU86_RS24875 () | 123964..124620 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| GUU86_RS24880 () | 124939..125367 | - | 429 | Protein_133 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| GUU86_RS24885 () | 125400..126791 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| GUU86_RS24890 () | 126828..127400 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| GUU86_RS24895 () | 127537..128127 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| GUU86_RS24900 () | 128245..128487 | + | 243 | WP_000844627.1 | transposase | - |
| GUU86_RS24905 () | 128519..129169 | - | 651 | WP_159186494.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GUU86_RS24910 () | 129275..130474 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| GUU86_RS24915 () | 130441..130629 | - | 189 | Protein_140 | IS91 family transposase | - |
| GUU86_RS24920 () | 130741..131046 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GUU86_RS24925 () | 131074..132288 | - | 1215 | WP_000214121.1 | Multidrug resistance protein MdtL | ARG |
| GUU86_RS25130 () | 132505..132951 | - | 447 | Protein_143 | DUF3363 domain-containing protein | - |
| GUU86_RS24935 () | 133420..134913 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|