MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP047665 Location: 3618656..3628007 Organism: Escherichia coli strain LD26-1 Replicon: chromosome
Accession: NZ_CP047665 Location: 3618656..3628007 Organism: Escherichia coli strain LD26-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU86_RS17265 () | 3615387..3616106 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| GUU86_RS17270 () | 3616103..3617734 | - | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| GUU86_RS17275 () | 3617915..3618145 | + | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| GUU86_RS17280 () | 3618157..3618429 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| GUU86_RS17285 () | 3618656..3618952 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| GUU86_RS17290 () | 3618980..3619153 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| GUU86_RS17295 () | 3619272..3620789 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| GUU86_RS17300 () | 3621026..3622483 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| GUU86_RS17305 () | 3622542..3624689 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| GUU86_RS17310 () | 3624769..3626103 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| GUU86_RS17315 () | 3626469..3628007 | - | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| GUU86_RS17325 () | 3628806..3629381 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| GUU86_RS17330 () | 3629418..3631115 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| GUU86_RS17335 () | 3631091..3631429 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| GUU86_RS17340 () | 3631545..3632846 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |