MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33309 bp
Accession: NZ_CP047664 Location: 1..33309 Organism: Escherichia coli strain LD93-1 Replicon: plasmid pLD93-1-MCR1
Accession: NZ_CP047664 Location: 1..33309 Organism: Escherichia coli strain LD93-1 Replicon: plasmid pLD93-1-MCR1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU84_RS23245 () | 459..962 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| GUU84_RS23250 () | 1323..1670 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GUU84_RS23255 () | 1667..1915 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GUU84_RS23260 () | 2220..2570 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| GUU84_RS23265 () | 2661..2960 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| GUU84_RS23270 () | 3414..3641 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| GUU84_RS23275 () | 3628..3879 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| GUU84_RS23280 () | 3876..4418 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| GUU84_RS23285 () | 4523..5038 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| GUU84_RS23290 () | 6453..7319 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| GUU84_RS23295 () | 7332..7736 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| GUU84_RS23300 () | 7871..8398 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| GUU84_RS23305 () | 8789..9511 | - | 723 | WP_039003037.1 | PAP2 family protein | - |
| GUU84_RS23310 () | 9583..11208 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| GUU84_RS23315 () | 11388..12011 | - | 624 | Protein_15 | DUF2806 domain-containing protein | - |
| GUU84_RS23320 () | 12172..12441 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| GUU84_RS23325 () | 12516..13163 | - | 648 | WP_000587671.1 | P-loop NTPase | - |
| GUU84_RS23330 () | 14704..15408 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GUU84_RS23335 () | 15495..15959 | - | 465 | WP_001293134.1 | H-NS histone family protein | - |
| GUU84_RS23340 () | 15977..16183 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| GUU84_RS23345 () | 16180..18333 | - | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| GUU84_RS23350 () | 18338..18910 | - | 573 | WP_001198960.1 | hypothetical protein | - |
| GUU84_RS23575 () | 18914..19060 | - | 147 | WP_000382583.1 | hypothetical protein | - |
| GUU84_RS23355 () | 19221..19526 | - | 306 | WP_001350475.1 | putative conjugal transfer protein | - |
| GUU84_RS23360 () | 19510..19929 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| GUU84_RS23365 () | 19941..21803 | - | 1863 | WP_170324155.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GUU84_RS23370 () | 21790..22818 | - | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| GUU84_RS23375 () | 22820..23938 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| GUU84_RS23380 () | 23931..24839 | - | 909 | WP_160188299.1 | Type IV secretion system protein virB9 | VF |
| GUU84_RS23385 () | 24836..25522 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| GUU84_RS23390 () | 26037..27131 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| GUU84_RS23395 () | 27143..27859 | - | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| GUU84_RS23400 () | 27871..30618 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| GUU84_RS23405 () | 30637..30909 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| GUU84_RS23410 () | 30977..31597 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| GUU84_RS23415 () | 31953..32168 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| GUU84_RS23420 () | 32165..32458 | - | 294 | WP_060598542.1 | LuxR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|