MGE detailed information
MGE type: Genomic_island MGE length: 30986 bp
Accession: NZ_CP047662 Location: 2259678..2290663 Organism: Escherichia coli strain LD93-1 Replicon: chromosome
Accession: NZ_CP047662 Location: 2259678..2290663 Organism: Escherichia coli strain LD93-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU84_RS10655 () | 2256493..2258178 | - | 1686 | WP_094318753.1 | ABC transporter ATP-binding protein/permease | - |
| GUU84_RS10660 () | 2258381..2258503 | + | 123 | WP_122985823.1 | hypothetical protein | - |
| GUU84_RS10665 () | 2258469..2259626 | - | 1158 | WP_001295683.1 | anaerobic sulfatase maturase | - |
| GUU84_RS10670 () | 2259678..2261360 | - | 1683 | WP_001295684.1 | sulfatase | - |
| GUU84_RS10675 () | 2261762..2262523 | - | 762 | WP_000060500.1 | acid stress response transcriptional regulator YdeO | - |
| GUU84_RS10680 () | 2262597..2262794 | - | 198 | WP_000543394.1 | two-component system connector SafA | - |
| GUU84_RS10685 () | 2263042..2265321 | - | 2280 | WP_160188217.1 | acid resistance putative oxidoreductase YdeP | - |
| GUU84_RS10690 () | 2265655..2266569 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| GUU84_RS10695 () | 2266628..2267131 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| GUU84_RS23515 () | 2267144..2267590 | - | 447 | Protein_2089 | type 1 fimbrial protein | - |
| GUU84_RS10700 () | 2267593..2268194 | - | 602 | Protein_2090 | fimbria/pilus outer membrane usher protein | - |
| GUU84_RS10705 () | 2268449..2268657 | - | 209 | Protein_2091 | helix-turn-helix transcriptional regulator | - |
| GUU84_RS10710 () | 2268824..2269972 | - | 1149 | Protein_2092 | IS3 family transposase | - |
| GUU84_RS10715 () | 2270648..2272171 | + | 1524 | WP_001459729.1 | type I restriction-modification system subunit M | - |
| GUU84_RS10720 () | 2272161..2273399 | + | 1239 | WP_039026445.1 | restriction endonuclease subunit S | - |
| GUU84_RS10725 () | 2273396..2274076 | + | 681 | Protein_2095 | YecA family protein | - |
| GUU84_RS10730 () | 2274129..2277413 | + | 3285 | WP_094337711.1 | type I restriction endonuclease subunit R | - |
| GUU84_RS10735 () | 2277410..2278165 | + | 756 | WP_039026446.1 | M48 family metallopeptidase | - |
| GUU84_RS10740 () | 2278411..2278569 | - | 159 | Protein_2098 | helix-turn-helix transcriptional regulator | - |
| GUU84_RS10745 () | 2278877..2279438 | - | 562 | Protein_2099 | hypothetical protein | - |
| GUU84_RS10750 () | 2279536..2279868 | + | 333 | WP_039026448.1 | helix-turn-helix domain-containing protein | - |
| GUU84_RS10755 () | 2280073..2280507 | - | 435 | WP_001214175.1 | hypothetical protein | - |
| GUU84_RS10760 () | 2280507..2282873 | - | 2367 | WP_039026449.1 | hypothetical protein ; Integrase | Integrase |
| GUU84_RS10765 () | 2282870..2284420 | - | 1551 | WP_000086931.1 | hypothetical protein ; Integrase | Integrase |
| GUU84_RS23520 () | 2284404..2285804 | - | 1401 | WP_001409388.1 | hypothetical protein ; Integrase | Integrase |
| GUU84_RS10775 () | 2286097..2287494 | + | 1398 | WP_025368664.1 | ISNCY family transposase ISKpn21 | Transposase |
| GUU84_RS10780 () | 2287726..2287995 | + | 270 | WP_001610304.1 | hypothetical protein | - |
| GUU84_RS10785 () | 2287995..2288462 | + | 468 | WP_025368663.1 | hypothetical protein | - |
| GUU84_RS10790 () | 2288505..2288876 | + | 372 | WP_001610302.1 | hypothetical protein | - |
| GUU84_RS10795 () | 2289075..2290397 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| GUU84_RS10800 () | 2290397..2290663 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| GUU84_RS10805 () | 2290886..2292286 | - | 1401 | WP_001083595.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|