MGE detailed information
MGE type: Prophage MGE length: 30381 bp
Accession: NZ_CP047658 Location: 2314061..2344441 Organism: Escherichia coli strain LD39-1 Replicon: chromosome
Accession: NZ_CP047658 Location: 2314061..2344441 Organism: Escherichia coli strain LD39-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU82_RS11125 () | 2311436..2313862 | - | 2427 | WP_000041681.1 | dimethyl sulfoxide reductase subunit A | - |
| GUU82_RS11130 () | 2314061..2314366 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| GUU82_RS11135 () | 2314474..2315184 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| GUU82_RS11140 () | 2315187..2315747 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| GUU82_RS11145 () | 2315782..2316123 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| GUU82_RS11150 () | 2316258..2316584 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| GUU82_RS11155 () | 2316790..2318004 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| GUU82_RS11160 () | 2318016..2319035 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| GUU82_RS11165 () | 2319093..2319203 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| GUU82_RS11170 () | 2319223..2320502 | - | 1280 | Protein_2182 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GUU82_RS11175 () | 2320537..2320788 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| GUU82_RS11180 () | 2320861..2321925 | - | 1065 | Protein_2184 | 3'-5' exoribonuclease | - |
| GUU82_RS11185 () | 2321925..2322167 | + | 243 | Protein_2185 | DUF977 family protein | - |
| GUU82_RS11190 () | 2322164..2322520 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| GUU82_RS24680 () | 2323131..2323418 | + | 288 | Protein_2187 | hypothetical protein | - |
| GUU82_RS11200 () | 2324188..2325501 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| GUU82_RS11205 () | 2325963..2326295 | - | 333 | WP_001301033.1 | protein FlxA | - |
| GUU82_RS11210 () | 2326498..2326803 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| GUU82_RS11215 () | 2326828..2327067 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GUU82_RS11220 () | 2327067..2327354 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GUU82_RS11225 () | 2327426..2327581 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| GUU82_RS11230 () | 2327798..2328049 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| GUU82_RS11235 () | 2328116..2328394 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| GUU82_RS11240 () | 2328396..2329445 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| GUU82_RS11245 () | 2329459..2330211 | + | 753 | WP_001047135.1 | antitermination protein | - |
| GUU82_RS11250 () | 2330489..2330578 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| GUU82_RS11255 () | 2330633..2330845 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| GUU82_RS11260 () | 2331146..2331361 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| GUU82_RS11265 () | 2332115..2332330 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| GUU82_RS11270 () | 2332335..2332646 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| GUU82_RS11275 () | 2332643..2333176 | + | 534 | WP_001092971.1 | lysozyme | - |
| GUU82_RS11280 () | 2333173..2333670 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| GUU82_RS11285 () | 2334033..2334245 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| GUU82_RS11290 () | 2334256..2334444 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| GUU82_RS11295 () | 2334447..2334512 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| GUU82_RS11300 () | 2334592..2334747 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| GUU82_RS11305 () | 2334919..2335092 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| GUU82_RS11310 () | 2335244..2335654 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| GUU82_RS11315 () | 2335712..2335945 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| GUU82_RS24685 () | 2336029..2338623 | + | 2595 | WP_074478589.1 | phage portal protein | - |
| GUU82_RS11325 () | 2338584..2340569 | + | 1986 | WP_054626213.1 | tail fiber protein | - |
| GUU82_RS11330 () | 2340569..2341144 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| GUU82_RS11335 () | 2341242..2341832 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GUU82_RS11340 () | 2342149..2342382 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| GUU82_RS11345 () | 2342451..2342564 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| GUU82_RS11350 () | 2343158..2344441 | + | 1284 | Protein_2218 | MHS family MFS transporter YdfJ | - |
| GUU82_RS11355 () | 2344530..2345990 | + | 1461 | WP_000527806.1 | mannitol dehydrogenase family protein | - |
| GUU82_RS11360 () | 2346026..2346229 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| GUU82_RS11365 () | 2346406..2347092 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| GUU82_RS11370 () | 2347181..2347927 | - | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|