NZ_CP0476171..82612

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 82612 bp
Accession: NZ_CP047617        Location: 1..82612         Organism: Lactococcus raffinolactis strain Lr_19_5       Replicon: plasmid pLraf_19_5_1


Gene structure

The 5 kb flanking regions of this MGE are displayed.

GU336_RS12610GU336_RS12640GU336_RS12645GU336_RS12655GU336_RS12660GU336_RS12665GU336_RS12670GU336_RS12675GU336_RS12680GU336_RS12685GU336_RS12690GU336_RS12695GU336_RS12700GU336_RS12705GU336_RS12710GU336_RS12715GU336_RS12720GU336_RS12725GU336_RS12730GU336_RS12735GU336_RS12740GU336_RS12745GU336_RS12750GU336_RS12755GU336_RS12760GU336_RS12765GU336_RS12770GU336_RS12775GU336_RS12780GU336_RS12790GU336_RS12795GU336_RS12800GU336_RS12805GU336_RS13045GU336_RS12810GU336_RS12815GU336_RS12820GU336_RS12825GU336_RS12830GU336_RS12865GU336_RS12870GU336_RS12875GU336_RS12885GU336_RS12910GU336_RS12915GU336_RS12920GU336_RS12925GU336_RS12930GU336_RS12935GU336_RS12980GU336_RS12990GU336_RS12615GU336_RS12620GU336_RS12625GU336_RS12630GU336_RS12635GU336_RS12785GU336_RS12835GU336_RS12840GU336_RS12845GU336_RS12850GU336_RS12855GU336_RS12860GU336_RS12880GU336_RS12890GU336_RS12895GU336_RS12900GU336_RS12905GU336_RS12940GU336_RS12945GU336_RS12950GU336_RS12955GU336_RS12960GU336_RS12965GU336_RS12970GU336_RS12975GU336_RS12985
Location: 41..622 (582 bp)
Type: Transposase
Protein ID: WP_167839304.1
Location: 5079..5411 (333 bp)
Type: Others
Protein ID: WP_167839253.1
Location: 5945..6268 (324 bp)
Type: Others
Protein ID: WP_167839254.1
Location: 6412..6594 (183 bp)
Type: Others
Protein ID: WP_167839255.1
Location: 6651..6887 (237 bp)
Type: Others
Protein ID: WP_167839256.1
Location: 6891..7718 (828 bp)
Type: Others
Protein ID: WP_167839257.1
Location: 7725..10238 (2514 bp)
Type: Others
Protein ID: WP_167839258.1
Location: 10324..12240 (1917 bp)
Type: Others
Protein ID: WP_167839259.1
Location: 12317..12580 (264 bp)
Type: Antitoxin
Protein ID: WP_167839260.1
Location: 12580..12846 (267 bp)
Type: Toxin
Protein ID: WP_167839261.1
Location: 12869..13501 (633 bp)
Type: Others
Protein ID: WP_167839262.1
Location: 13577..16963 (3387 bp)
Type: VF
Protein ID: WP_167839263.1
Location: 17071..17367 (297 bp)
Type: Others
Protein ID: WP_167839264.1
Location: 17371..19881 (2511 bp)
Type: Others
Protein ID: WP_167839265.1
Location: 19883..20458 (576 bp)
Type: Others
Protein ID: WP_167839266.1
Location: 20433..21515 (1083 bp)
Type: Others
Protein ID: WP_167839267.1
Location: 21528..22178 (651 bp)
Type: Others
Protein ID: WP_167839268.1
Location: 22184..23005 (822 bp)
Type: Others
Protein ID: WP_167839269.1
Location: 23371..23616 (246 bp)
Type: Others
Protein ID: WP_167839270.1
Location: 23850..24323 (474 bp)
Type: Others
Protein ID: WP_167839271.1
Location: 24357..25580 (1224 bp)
Type: Relaxase
Protein ID: WP_167839272.1
Location: 25595..26419 (825 bp)
Type: VF
Protein ID: WP_167839273.1
Location: 26431..27633 (1203 bp)
Type: Others
Protein ID: WP_167839274.1
Location: 27779..28177 (399 bp)
Type: Others
Protein ID: WP_167839275.1
Location: 28212..35438 (7227 bp)
Type: Others
Protein ID: WP_167839276.1
Location: 35573..35998 (426 bp)
Type: Others
Protein ID: WP_167839277.1
Location: 36022..36231 (210 bp)
Type: Others
Protein ID: WP_167839278.1
Location: 36224..36475 (252 bp)
Type: Others
Protein ID: WP_167839279.1
Location: 36490..37158 (669 bp)
Type: Others
Protein ID: WP_167839280.1
Location: 38169..38846 (678 bp)
Type: VF
Protein ID: WP_167839281.1
Location: 38812..39477 (666 bp)
Type: Others
Protein ID: WP_167839282.1
Location: 39479..48649 (9171 bp)
Type: Others
Protein ID: WP_167839283.1
Location: 48652..49134 (483 bp)
Type: Others
Protein ID: WP_167839284.1
Location: 49131..49367 (237 bp)
Type: Others
Protein ID: WP_209451965.1
Location: 49515..49769 (255 bp)
Type: Others
Protein ID: WP_167839285.1
Location: 50153..50341 (189 bp)
Type: Others
Protein ID: WP_003130770.1
Location: 50341..50850 (510 bp)
Type: Others
Protein ID: WP_003130771.1
Location: 50847..51413 (567 bp)
Type: Transposase
Protein ID: WP_167839286.1
Location: 51458..54376 (2919 bp)
Type: Transposase
Protein ID: WP_068872863.1
Location: 62969..63136 (168 bp)
Type: Others
Protein ID: Protein_51
Location: 63136..63369 (234 bp)
Type: Transposase
Protein ID: Protein_52
Location: 63437..63580 (144 bp)
Type: Transposase
Protein ID: Protein_53
Location: 64706..64948 (243 bp)
Type: Others
Protein ID: WP_167839292.1
Location: 66575..67255 (681 bp)
Type: Transposase
Protein ID: WP_167839295.1
Location: 67322..67693 (372 bp)
Type: Others
Protein ID: WP_167839303.1
Location: 67847..68605 (759 bp)
Type: Others
Protein ID: WP_167839296.1
Location: 69277..69582 (306 bp)
Type: Others
Protein ID: WP_031367166.1
Location: 69585..70172 (588 bp)
Type: Transposase
Protein ID: WP_167839029.1
Location: 70296..71294 (999 bp)
Type: Transposase
Protein ID: WP_071519405.1
Location: 80809..81489 (681 bp)
Type: Transposase
Protein ID: WP_167838971.1
Location: 82283..82558 (276 bp)
Type: Transposase
Protein ID: Protein_76
Location: 643..882 (240 bp)
Type: Others
Protein ID: WP_167839248.1
Location: 900..1697 (798 bp)
Type: VF
Protein ID: WP_167839249.1
Location: 1772..3097 (1326 bp)
Type: Others
Protein ID: WP_167839250.1
Location: 3825..4133 (309 bp)
Type: VF
Protein ID: WP_167839251.1
Location: 4503..4793 (291 bp)
Type: Others
Protein ID: WP_167839252.1
Location: 37741..37908 (168 bp)
Type: Others
Protein ID: WP_167838966.1
Location: 54687..54884 (198 bp)
Type: Others
Protein ID: WP_167839287.1
Location: 55045..55725 (681 bp)
Type: Transposase
Protein ID: WP_047916692.1
Location: 56629..57855 (1227 bp)
Type: Others
Protein ID: WP_167839288.1
Location: 57845..59440 (1596 bp)
Type: Others
Protein ID: WP_167839289.1
Location: 59440..62517 (3078 bp)
Type: Others
Protein ID: WP_167839290.1
Location: 62534..62902 (369 bp)
Type: Others
Protein ID: Protein_50
Location: 63599..64534 (936 bp)
Type: Transposase
Protein ID: WP_167839291.1
Location: 65063..65599 (537 bp)
Type: Others
Protein ID: WP_167839293.1
Location: 65592..65909 (318 bp)
Type: Others
Protein ID: WP_129930603.1
Location: 65884..66102 (219 bp)
Type: Others
Protein ID: WP_167839294.1
Location: 66240..66563 (324 bp)
Type: Others
Protein ID: WP_167839302.1
Location: 71919..72368 (450 bp)
Type: Others
Protein ID: Protein_66
Location: 72404..72937 (534 bp)
Type: Others
Protein ID: WP_008665086.1
Location: 73055..74518 (1464 bp)
Type: ARG
Protein ID: WP_167839297.1
Location: 74638..75855 (1218 bp)
Type: ARG
Protein ID: WP_024410015.1
Location: 76391..77025 (635 bp)
Type: Others
Protein ID: Protein_70
Location: 77461..78957 (1497 bp)
Type: Others
Protein ID: WP_167839298.1
Location: 78950..79810 (861 bp)
Type: Others
Protein ID: WP_167839299.1
Location: 79894..80586 (693 bp)
Type: Others
Protein ID: WP_167839300.1
Location: 81631..81969 (339 bp)
Type: Others
Protein ID: WP_167839301.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
GU336_RS12610 ()41..622+582WP_167839304.1Tn3 family transposase TnpR_ISPa40Transposase
GU336_RS12615 ()643..882-240WP_167839248.1hypothetical protein-
GU336_RS12620 ()900..1697-798WP_167839249.1hypothetical proteinVF
GU336_RS12625 ()1772..3097-1326WP_167839250.1RepB family plasmid replication initiator protein-
GU336_RS12630 ()3825..4133-309WP_167839251.1hypothetical proteinVF
GU336_RS12635 ()4503..4793-291WP_167839252.1helix-turn-helix domain-containing protein-
GU336_RS12640 ()5079..5411+333WP_167839253.1hypothetical protein-
GU336_RS12645 ()5945..6268+324WP_167839254.1hypothetical protein-
GU336_RS12655 ()6412..6594+183WP_167839255.1hypothetical protein-
GU336_RS12660 ()6651..6887+237WP_167839256.1pilin-
GU336_RS12665 ()6891..7718+828WP_167839257.1hypothetical protein-
GU336_RS12670 ()7725..10238+2514WP_167839258.1type IV secretory system conjugative DNA transfer family protein-
GU336_RS12675 ()10324..12240+1917WP_167839259.1hypothetical protein-
GU336_RS12680 ()12317..12580+264WP_167839260.1type II toxin-antitoxin system Phd/YefM family antitoxinAntitoxin Detail
GU336_RS12685 ()12580..12846+267WP_167839261.1Txe/YoeB family addiction module toxinToxin Detail
GU336_RS12690 ()12869..13501+633WP_167839262.1hypothetical protein-
GU336_RS12695 ()13577..16963+3387WP_167839263.1hypothetical proteinVF
GU336_RS12700 ()17071..17367+297WP_167839264.1hypothetical protein-
GU336_RS12705 ()17371..19881+2511WP_167839265.1hypothetical protein-
GU336_RS12710 ()19883..20458+576WP_167839266.1hypothetical protein-
Showing 1 to 20 of 77 rows
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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
No matching records found