MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82612 bp
Accession: NZ_CP047617 Location: 1..82612 Organism: Lactococcus raffinolactis strain Lr_19_5 Replicon: plasmid pLraf_19_5_1
Accession: NZ_CP047617 Location: 1..82612 Organism: Lactococcus raffinolactis strain Lr_19_5 Replicon: plasmid pLraf_19_5_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GU336_RS12610 () | 41..622 | + | 582 | WP_167839304.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| GU336_RS12615 () | 643..882 | - | 240 | WP_167839248.1 | hypothetical protein | - |
| GU336_RS12620 () | 900..1697 | - | 798 | WP_167839249.1 | hypothetical protein | VF |
| GU336_RS12625 () | 1772..3097 | - | 1326 | WP_167839250.1 | RepB family plasmid replication initiator protein | - |
| GU336_RS12630 () | 3825..4133 | - | 309 | WP_167839251.1 | hypothetical protein | VF |
| GU336_RS12635 () | 4503..4793 | - | 291 | WP_167839252.1 | helix-turn-helix domain-containing protein | - |
| GU336_RS12640 () | 5079..5411 | + | 333 | WP_167839253.1 | hypothetical protein | - |
| GU336_RS12645 () | 5945..6268 | + | 324 | WP_167839254.1 | hypothetical protein | - |
| GU336_RS12655 () | 6412..6594 | + | 183 | WP_167839255.1 | hypothetical protein | - |
| GU336_RS12660 () | 6651..6887 | + | 237 | WP_167839256.1 | pilin | - |
| GU336_RS12665 () | 6891..7718 | + | 828 | WP_167839257.1 | hypothetical protein | - |
| GU336_RS12670 () | 7725..10238 | + | 2514 | WP_167839258.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GU336_RS12675 () | 10324..12240 | + | 1917 | WP_167839259.1 | hypothetical protein | - |
| GU336_RS12680 () | 12317..12580 | + | 264 | WP_167839260.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GU336_RS12685 () | 12580..12846 | + | 267 | WP_167839261.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| GU336_RS12690 () | 12869..13501 | + | 633 | WP_167839262.1 | hypothetical protein | - |
| GU336_RS12695 () | 13577..16963 | + | 3387 | WP_167839263.1 | hypothetical protein | VF |
| GU336_RS12700 () | 17071..17367 | + | 297 | WP_167839264.1 | hypothetical protein | - |
| GU336_RS12705 () | 17371..19881 | + | 2511 | WP_167839265.1 | hypothetical protein | - |
| GU336_RS12710 () | 19883..20458 | + | 576 | WP_167839266.1 | hypothetical protein | - |
| GU336_RS12715 () | 20433..21515 | + | 1083 | WP_167839267.1 | CHAP domain-containing protein | - |
| GU336_RS12720 () | 21528..22178 | + | 651 | WP_167839268.1 | hypothetical protein | - |
| GU336_RS12725 () | 22184..23005 | + | 822 | WP_167839269.1 | hypothetical protein | - |
| GU336_RS12730 () | 23371..23616 | + | 246 | WP_167839270.1 | hypothetical protein | - |
| GU336_RS12735 () | 23850..24323 | + | 474 | WP_167839271.1 | hypothetical protein | - |
| GU336_RS12740 () | 24357..25580 | + | 1224 | WP_167839272.1 | hypothetical protein | Relaxase |
| GU336_RS12745 () | 25595..26419 | + | 825 | WP_167839273.1 | hypothetical protein | VF |
| GU336_RS12750 () | 26431..27633 | + | 1203 | WP_167839274.1 | toprim domain-containing protein | - |
| GU336_RS12755 () | 27779..28177 | + | 399 | WP_167839275.1 | single-stranded DNA-binding protein | - |
| GU336_RS12760 () | 28212..35438 | + | 7227 | WP_167839276.1 | DEAD/DEAH box helicase family protein | - |
| GU336_RS12765 () | 35573..35998 | + | 426 | WP_167839277.1 | hypothetical protein | - |
| GU336_RS12770 () | 36022..36231 | + | 210 | WP_167839278.1 | hypothetical protein | - |
| GU336_RS12775 () | 36224..36475 | + | 252 | WP_167839279.1 | hypothetical protein | - |
| GU336_RS12780 () | 36490..37158 | + | 669 | WP_167839280.1 | DUF2786 domain-containing protein | - |
| GU336_RS12785 () | 37741..37908 | - | 168 | WP_167838966.1 | hypothetical protein | - |
| GU336_RS12790 () | 38169..38846 | + | 678 | WP_167839281.1 | hypothetical protein | VF |
| GU336_RS12795 () | 38812..39477 | + | 666 | WP_167839282.1 | hypothetical protein | - |
| GU336_RS12800 () | 39479..48649 | + | 9171 | WP_167839283.1 | hypothetical protein | - |
| GU336_RS12805 () | 48652..49134 | + | 483 | WP_167839284.1 | hypothetical protein | - |
| GU336_RS13045 () | 49131..49367 | + | 237 | WP_209451965.1 | hypothetical protein | - |
| GU336_RS12810 () | 49515..49769 | + | 255 | WP_167839285.1 | hydrolase | - |
| GU336_RS12815 () | 50153..50341 | + | 189 | WP_003130770.1 | hypothetical protein | - |
| GU336_RS12820 () | 50341..50850 | + | 510 | WP_003130771.1 | MepB family protein | - |
| GU336_RS12825 () | 50847..51413 | + | 567 | WP_167839286.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| GU336_RS12830 () | 51458..54376 | + | 2919 | WP_068872863.1 | Tn3 family transposase Tn4430 | Transposase |
| GU336_RS12835 () | 54687..54884 | - | 198 | WP_167839287.1 | hypothetical protein | - |
| GU336_RS12840 () | 55045..55725 | - | 681 | WP_047916692.1 | IS6 family transposase IS1297 | Transposase |
| GU336_RS12845 () | 56629..57855 | - | 1227 | WP_167839288.1 | restriction endonuclease subunit S | - |
| GU336_RS12850 () | 57845..59440 | - | 1596 | WP_167839289.1 | type I restriction-modification system subunit M | - |
| GU336_RS12855 () | 59440..62517 | - | 3078 | WP_167839290.1 | HsdR family type I site-specific deoxyribonuclease | - |
| GU336_RS12860 () | 62534..62902 | - | 369 | Protein_50 | hypothetical protein | - |
| GU336_RS12865 () | 62969..63136 | + | 168 | Protein_51 | IS982 family transposase | - |
| GU336_RS12870 () | 63136..63369 | + | 234 | Protein_52 | IS5 family transposase IS1194 | Transposase |
| GU336_RS12875 () | 63437..63580 | + | 144 | Protein_53 | IS5 family transposase IS1194 | Transposase |
| GU336_RS12880 () | 63599..64534 | - | 936 | WP_167839291.1 | IS30 family transposase ISSpn8 | Transposase |
| GU336_RS12885 () | 64706..64948 | + | 243 | WP_167839292.1 | hypothetical protein | - |
| GU336_RS12890 () | 65063..65599 | - | 537 | WP_167839293.1 | DUF2800 domain-containing protein | - |
| GU336_RS12895 () | 65592..65909 | - | 318 | WP_129930603.1 | rRNA biogenesis protein rrp5 | - |
| GU336_RS12900 () | 65884..66102 | - | 219 | WP_167839294.1 | hypothetical protein | - |
| GU336_RS12905 () | 66240..66563 | - | 324 | WP_167839302.1 | hypothetical protein | - |
| GU336_RS12910 () | 66575..67255 | + | 681 | WP_167839295.1 | IS6 family transposase IS1297 | Transposase |
| GU336_RS12915 () | 67322..67693 | + | 372 | WP_167839303.1 | LysM peptidoglycan-binding domain-containing protein | - |
| GU336_RS12920 () | 67847..68605 | + | 759 | WP_167839296.1 | DUF3825 domain-containing protein | - |
| GU336_RS12925 () | 69277..69582 | + | 306 | WP_031367166.1 | bacteriocin immunity protein | - |
| GU336_RS12930 () | 69585..70172 | + | 588 | WP_167839029.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| GU336_RS12935 () | 70296..71294 | + | 999 | WP_071519405.1 | IS5 family transposase IS1194 | Transposase |
| GU336_RS12940 () | 71919..72368 | - | 450 | Protein_66 | CatB-related O-acetyltransferase | - |
| GU336_RS12945 () | 72404..72937 | - | 534 | WP_008665086.1 | GrpB family protein | - |
| GU336_RS12950 () | 73055..74518 | - | 1464 | WP_167839297.1 | putative ABC transporter ATP-binding protein YheS | ARG |
| GU336_RS12955 () | 74638..75855 | - | 1218 | WP_024410015.1 | putative MFS-type transporter | ARG |
| GU336_RS12960 () | 76391..77025 | - | 635 | Protein_70 | WYL domain-containing protein | - |
| GU336_RS12965 () | 77461..78957 | - | 1497 | WP_167839298.1 | hypothetical protein | - |
| GU336_RS12970 () | 78950..79810 | - | 861 | WP_167839299.1 | hypothetical protein | - |
| GU336_RS12975 () | 79894..80586 | - | 693 | WP_167839300.1 | hypothetical protein | - |
| GU336_RS12980 () | 80809..81489 | + | 681 | WP_167838971.1 | IS6 family transposase IS1216E | Transposase |
| GU336_RS12985 () | 81631..81969 | - | 339 | WP_167839301.1 | bacteriocin immunity protein | - |
| GU336_RS12990 () | 82283..82558 | + | 276 | Protein_76 | IS6 family transposase IS1297 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|