MGE detailed information
MGE type: Mobilizable plasmid MGE length: 51704 bp
Accession: NZ_CP047610 Location: 1..51704 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: plasmid pNMBU_W06E18_Str1_1
Accession: NZ_CP047610 Location: 1..51704 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: plasmid pNMBU_W06E18_Str1_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GU332_RS25295 () | 46..1077 | + | 1032 | WP_106490007.1 | replication initiation protein | - |
| GU332_RS25300 () | 1774..1914 | + | 141 | WP_012512742.1 | hypothetical protein | - |
| GU332_RS25305 () | 1987..2256 | + | 270 | WP_000079931.1 | hypothetical protein | Antitoxin Detail |
| GU332_RS25310 () | 2253..2534 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GU332_RS25315 () | 2729..3070 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| GU332_RS25320 () | 3370..3957 | + | 588 | WP_106490006.1 | serine acetyltransferase | - |
| GU332_RS25325 () | 4239..4832 | - | 594 | WP_032274973.1 | proQ/FINO family protein | - |
| GU332_RS25330 () | 5433..6023 | - | 591 | WP_106490005.1 | hypothetical protein | - |
| GU332_RS25335 () | 6023..6280 | - | 258 | WP_000343099.1 | hypothetical protein | - |
| GU332_RS25340 () | 6850..7263 | + | 414 | WP_106490004.1 | hypothetical protein | - |
| GU332_RS25345 () | 7265..8044 | + | 780 | WP_047649952.1 | site-specific integrase | - |
| GU332_RS25350 () | 8223..8867 | + | 645 | WP_001144036.1 | ParA family protein | - |
| GU332_RS25355 () | 8954..9262 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| GU332_RS25360 () | 9676..10656 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| GU332_RS25365 () | 10649..11065 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| GU332_RS25370 () | 11067..12341 | - | 1275 | WP_047649951.1 | Y-family DNA polymerase | - |
| GU332_RS25375 () | 12341..12778 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GU332_RS25380 () | 12775..13023 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| GU332_RS25385 () | 13441..14343 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| GU332_RS25390 () | 14340..14651 | + | 312 | WP_032260789.1 | hypothetical protein | - |
| GU332_RS25395 () | 14727..15410 | + | 684 | WP_000086148.1 | DNA methylase | - |
| GU332_RS25400 () | 15411..15632 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| GU332_RS25405 () | 15646..16080 | + | 435 | WP_000274412.1 | DUF1380 family protein | - |
| GU332_RS25410 () | 16126..16351 | + | 226 | Protein_23 | hypothetical protein | - |
| GU332_RS25415 () | 16775..17340 | + | 566 | Protein_24 | DUF1472 domain-containing protein | - |
| GU332_RS25420 () | 17436..17738 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| GU332_RS25425 () | 17785..18207 | + | 423 | WP_044706628.1 | DUF1380 family protein | - |
| GU332_RS25430 () | 18204..18395 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| GU332_RS25435 () | 18466..18780 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| GU332_RS25440 () | 19164..19691 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| GU332_RS25445 () | 19748..19981 | + | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| GU332_RS25450 () | 20043..22001 | + | 1959 | WP_106490000.1 | ParB/RepB/Spo0J family partition protein | - |
| GU332_RS25455 () | 22056..22490 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| GU332_RS25460 () | 22487..23206 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| GU332_RS25465 () | 23203..23799 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| GU332_RS25470 () | 23871..24341 | + | 471 | WP_001671344.1 | YubH family protein | - |
| GU332_RS25475 () | 24262..24762 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| GU332_RS25480 () | 25491..25925 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| GU332_RS25485 () | 26018..26284 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| GU332_RS25490 () | 26349..27251 | + | 903 | WP_044704906.1 | Recombination-promoting nuclease RpnA | VF |
| GU332_RS25495 () | 27313..27519 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| GU332_RS25500 () | 27550..27801 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| GU332_RS25505 () | 27835..28032 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| GU332_RS25510 () | 28381..28680 | + | 300 | Protein_43 | DUF4942 domain-containing protein | - |
| GU332_RS25515 () | 28873..30414 | + | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| GU332_RS25520 () | 30429..31175 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| GU332_RS25525 () | 31273..31815 | + | 543 | WP_077793839.1 | DUF4942 domain-containing protein | - |
| GU332_RS25530 () | 31902..32237 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| GU332_RS25535 () | 32471..32803 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| GU332_RS25540 () | 32814..35513 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| GU332_RS25545 () | 35551..37842 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| GU332_RS25550 () | 37835..38905 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| GU332_RS25555 () | 38924..40132 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 40312..40369 | - | 58 | NuclAT_1 | - | - |
| - () | 40312..40369 | - | 58 | NuclAT_1 | - | - |
| - () | 40312..40369 | - | 58 | NuclAT_1 | - | - |
| - () | 40312..40369 | - | 58 | NuclAT_1 | - | - |
| GU332_RS25560 () | 40439..41188 | - | 750 | Protein_53 | protein finQ | - |
| GU332_RS25565 () | 41417..41734 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| GU332_RS25570 () | 41731..42264 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| GU332_RS25575 () | 42358..43503 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| GU332_RS25580 () | 43956..44653 | - | 698 | Protein_57 | IS1 family transposase | - |
| GU332_RS25585 () | 44878..45087 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| GU332_RS25590 () | 45479..45655 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| GU332_RS25595 () | 45720..46016 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| GU332_RS25600 () | 46316..46567 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| GU332_RS25605 () | 46639..46791 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 46843..46903 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 46843..46903 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 46843..46903 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 46843..46903 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| GU332_RS25610 () | 47106..47453 | + | 348 | Protein_63 | protein finQ | - |
| GU332_RS25615 () | 47639..48796 | + | 1158 | Protein_64 | IS1380 family transposase ISEcp1 | Transposase |
| GU332_RS25620 () | 48852..49549 | + | 698 | Protein_65 | IS1 family transposase | - |
| GU332_RS25625 () | 49563..49868 | - | 306 | Protein_66 | transcription termination factor NusG | - |
| GU332_RS25630 () | 50310..50597 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| GU332_RS25635 () | 50515..50778 | - | 264 | WP_032180564.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|