MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52671 bp
Accession: NZ_CP047609 Location: 3079267..3131937 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: chromosome
Accession: NZ_CP047609 Location: 3079267..3131937 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GU332_RS14875 () | 3075505..3075933 | - | 429 | WP_001287457.1 | DedA family protein | - |
| GU332_RS14880 () | 3075930..3076496 | - | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| GU332_RS14910 () | 3077954..3078139 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| GU332_RS14915 () | 3078374..3081004 | - | 2631 | WP_075826804.1 | alanine--tRNA ligase | - |
| GU332_RS14920 () | 3081133..3081633 | - | 501 | WP_000140506.1 | recombination regulator RecX | - |
| GU332_RS14925 () | 3081876..3082937 | - | 1062 | WP_000963143.1 | recombinase RecA | - |
| GU332_RS14930 () | 3083017..3083514 | - | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| GU332_RS14935 () | 3083659..3084744 | - | 1086 | WP_020234022.1 | lytic murein transglycosylase B | - |
| GU332_RS14940 () | 3085000..3085563 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| GU332_RS14945 () | 3085560..3086519 | + | 960 | WP_000196934.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| GU332_RS14950 () | 3086530..3086901 | + | 372 | WP_000216215.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| GU332_RS14955 () | 3086905..3087684 | + | 780 | WP_001077342.1 | sorbitol-6-phosphate dehydrogenase | - |
| GU332_RS14960 () | 3087790..3088149 | + | 360 | WP_075826803.1 | transcriptional regulator GutM | - |
| GU332_RS14965 () | 3088216..3088989 | + | 774 | WP_000804552.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| GU332_RS14970 () | 3088982..3089947 | + | 966 | WP_001287415.1 | hypothetical protein | VF |
| GU332_RS14975 () | 3089944..3091458 | - | 1515 | WP_001521129.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| GU332_RS14980 () | 3091645..3093084 | + | 1440 | WP_000029623.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| GU332_RS14985 () | 3093081..3094214 | + | 1134 | WP_001521130.1 | NADH:flavorubredoxin reductase NorW | - |
| GU332_RS14990 () | 3094292..3096532 | - | 2241 | WP_001521131.1 | carbamoyltransferase HypF | - |
| GU332_RS14995 () | 3096685..3097212 | - | 528 | WP_001078777.1 | electron transport protein HydN | - |
| GU332_RS15000 () | 3097361..3098371 | - | 1011 | WP_015912547.1 | DNA-binding transcriptional regulator AscG | - |
| GU332_RS15005 () | 3098631..3100088 | + | 1458 | WP_020234027.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| GU332_RS15010 () | 3100097..3101521 | + | 1425 | WP_020234028.1 | 6-phospho-beta-glucosidase AscB | - |
| GU332_RS15015 () | 3101600..3102019 | - | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| GU332_RS15020 () | 3102016..3102327 | - | 312 | WP_001521139.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| GU332_RS15025 () | 3102494..3102964 | - | 471 | WP_000132961.1 | hydrogenase maturation peptidase HycI | - |
| GU332_RS15030 () | 3102957..3103367 | - | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| GU332_RS15035 () | 3103364..3104131 | - | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| GU332_RS15040 () | 3104131..3104673 | - | 543 | WP_000493785.1 | formate hydrogenlyase subunit HycF | - |
| GU332_RS15045 () | 3104683..3106392 | - | 1710 | WP_001521140.1 | formate hydrogenlyase subunit HycE | - |
| GU332_RS15050 () | 3106410..3107333 | - | 924 | WP_000115226.1 | formate hydrogenlyase subunit HycD | - |
| GU332_RS15055 () | 3107336..3109162 | - | 1827 | WP_001521141.1 | formate hydrogenlyase subunit 3 | - |
| GU332_RS15060 () | 3109159..3109770 | - | 612 | WP_001079186.1 | formate hydrogenlyase subunit HycB | - |
| GU332_RS15065 () | 3109895..3110356 | - | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| GU332_RS15070 () | 3110568..3110918 | + | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| GU332_RS15075 () | 3110922..3111794 | + | 873 | WP_000337682.1 | hydrogenase nickel incorporation protein HypB | - |
| GU332_RS15080 () | 3111785..3112057 | + | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| GU332_RS15085 () | 3112057..3113178 | + | 1122 | WP_001212997.1 | hydrogenase formation protein HypD | - |
| GU332_RS15090 () | 3113175..3114185 | + | 1011 | WP_001521142.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| GU332_RS15095 () | 3114259..3116337 | + | 2079 | WP_021523231.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| GU332_RS15100 () | 3116382..3116810 | + | 429 | WP_001521144.1 | TOBE domain-containing protein | - |
| GU332_RS15105 () | 3116849..3117193 | - | 345 | WP_000015479.1 | nitrous oxide-stimulated promoter family protein | - |
| GU332_RS15110 () | 3117270..3117404 | - | 135 | WP_000611937.1 | hypothetical protein | - |
| GU332_RS15115 () | 3118065..3119219 | + | 1155 | WP_029701610.1 | hypothetical protein | - |
| GU332_RS15120 () | 3119212..3121086 | + | 1875 | WP_029701609.1 | ThiF family adenylyltransferase | - |
| GU332_RS15125 () | 3121079..3121567 | + | 489 | WP_029701608.1 | Mov34/MPN/PAD-1 family protein | - |
| GU332_RS15130 () | 3121595..3122500 | + | 906 | WP_029701605.1 | hypothetical protein | - |
| GU332_RS15135 () | 3122589..3123218 | - | 630 | WP_001513936.1 | hypothetical protein | - |
| GU332_RS15140 () | 3123445..3123807 | - | 363 | WP_029701603.1 | hypothetical protein | - |
| GU332_RS15145 () | 3123963..3124388 | + | 426 | WP_029701602.1 | hypothetical protein | - |
| GU332_RS15150 () | 3124366..3125592 | + | 1227 | WP_029701600.1 | relaxase/mobilization nuclease domain-containing protein | - |
| GU332_RS15155 () | 3125906..3126550 | + | 645 | WP_029701599.1 | hypothetical protein | - |
| GU332_RS15160 () | 3126739..3127152 | - | 414 | WP_001513941.1 | hypothetical protein | - |
| GU332_RS15165 () | 3127310..3127564 | - | 255 | WP_001513942.1 | hypothetical protein | - |
| GU332_RS15170 () | 3127561..3128421 | - | 861 | WP_029701597.1 | replication initiation protein | - |
| GU332_RS15175 () | 3128870..3129460 | - | 591 | WP_029701595.1 | hypothetical protein | - |
| GU332_RS15180 () | 3129457..3130920 | - | 1464 | WP_029701594.1 | hypothetical protein ; Integrase | Integrase |
| GU332_RS15185 () | 3131080..3133647 | + | 2568 | WP_108433725.1 | DNA mismatch repair protein MutS | - |
| GU332_RS15190 () | 3133753..3134409 | + | 657 | WP_001141345.1 | protein-serine/threonine phosphatase | - |
| GU332_RS15195 () | 3134460..3135227 | - | 768 | WP_001295181.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GU332_RS15200 () | 3135423..3136331 | + | 909 | WP_000847993.1 | NAD(P)-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|