MGE detailed information
MGE type: Prophage MGE length: 56388 bp
Accession: NZ_CP047609 Location: 1641685..1698072 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: chromosome
Accession: NZ_CP047609 Location: 1641685..1698072 Organism: Escherichia coli strain NMBU_ W06E18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GU332_RS07775 () | 1637001..1637828 | + | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| GU332_RS07780 () | 1637825..1638682 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| GU332_RS07785 () | 1638679..1639536 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| GU332_RS07790 () | 1640009..1640803 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| GU332_RS07795 () | 1640928..1641079 | + | 152 | Protein_1533 | DinI-like family protein | - |
| GU332_RS07800 () | 1641349..1641642 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| GU332_RS07805 () | 1641685..1642725 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| GU332_RS07810 () | 1642735..1643016 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| GU332_RS07815 () | 1643016..1645391 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GU332_RS07820 () | 1645456..1646055 | - | 600 | WP_001542091.1 | hypothetical protein | VF |
| GU332_RS07825 () | 1646123..1649602 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| GU332_RS07830 () | 1649663..1650265 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| GU332_RS07835 () | 1650202..1650945 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| GU332_RS07840 () | 1650951..1651649 | - | 699 | WP_029702161.1 | phage minor tail protein L | - |
| GU332_RS07845 () | 1651649..1651978 | - | 330 | WP_000847345.1 | phage tail protein | - |
| GU332_RS07850 () | 1651975..1654536 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| GU332_RS07855 () | 1654529..1654963 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| GU332_RS07860 () | 1654945..1655367 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| GU332_RS07865 () | 1655383..1656123 | - | 741 | WP_001349920.1 | phage tail protein | - |
| GU332_RS07870 () | 1656131..1656526 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| GU332_RS07875 () | 1656523..1657101 | - | 579 | WP_000975070.1 | phage tail protein | - |
| GU332_RS07880 () | 1657113..1657466 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| GU332_RS07885 () | 1657478..1657876 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| GU332_RS07890 () | 1657918..1658943 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| GU332_RS07895 () | 1658998..1659330 | - | 333 | WP_001708751.1 | head decoration protein | - |
| GU332_RS07900 () | 1659340..1660659 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| GU332_RS07905 () | 1660640..1662241 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| GU332_RS07910 () | 1662238..1662444 | - | 207 | WP_000198149.1 | gpW family protein | - |
| GU332_RS07915 () | 1662441..1664366 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| GU332_RS07920 () | 1664341..1664886 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| GU332_RS07925 () | 1665275..1665508 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| GU332_RS07930 () | 1665566..1665976 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| GU332_RS07935 () | 1666128..1666301 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| GU332_RS07940 () | 1666473..1666628 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| GU332_RS07945 () | 1666708..1666773 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| GU332_RS07950 () | 1666776..1666964 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| GU332_RS07955 () | 1666975..1667187 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| GU332_RS07960 () | 1667550..1668047 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| GU332_RS07965 () | 1668044..1668577 | - | 534 | WP_001092971.1 | lysozyme | - |
| GU332_RS07970 () | 1668574..1668885 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| GU332_RS07975 () | 1668890..1669105 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| GU332_RS07980 () | 1669662..1670120 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| GU332_RS07985 () | 1670571..1670786 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| GU332_RS07990 () | 1671087..1671299 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| GU332_RS07995 () | 1671354..1671443 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| GU332_RS08000 () | 1671721..1672473 | - | 753 | WP_001047135.1 | antitermination protein | - |
| GU332_RS08005 () | 1672487..1673536 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| GU332_RS08010 () | 1673538..1673816 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| GU332_RS08015 () | 1673883..1674134 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| GU332_RS08020 () | 1674351..1674506 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| GU332_RS08025 () | 1674578..1674865 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GU332_RS08030 () | 1674865..1675104 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GU332_RS08035 () | 1675129..1675434 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| GU332_RS08040 () | 1675637..1675969 | + | 333 | WP_001301033.1 | protein FlxA | - |
| GU332_RS08045 () | 1676406..1677719 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| GU332_RS08050 () | 1678203..1679225 | - | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| GU332_RS08055 () | 1679228..1679842 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| GU332_RS08060 () | 1680051..1680716 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| GU332_RS08065 () | 1680919..1681317 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| GU332_RS08070 () | 1681358..1682323 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| GU332_RS08075 () | 1682304..1682825 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| GU332_RS08080 () | 1682809..1683036 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| GU332_RS08085 () | 1683117..1683524 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| GU332_RS08090 () | 1683693..1683848 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| GU332_RS08095 () | 1683850..1684425 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| GU332_RS08100 () | 1684912..1685100 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| GU332_RS08105 () | 1685097..1685288 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| GU332_RS08110 () | 1685382..1687853 | + | 2472 | WP_000048363.1 | exonuclease | - |
| GU332_RS08115 () | 1687926..1688177 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| GU332_RS08120 () | 1688248..1688925 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| GU332_RS08125 () | 1688925..1689272 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| GU332_RS08130 () | 1689292..1690863 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| GU332_RS08135 () | 1690904..1691023 | + | 120 | Protein_1601 | DUF3596 domain-containing protein | - |
| GU332_RS08140 () | 1691133..1691591 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| GU332_RS08145 () | 1691735..1692910 | + | 1176 | Protein_1603 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GU332_RS08150 () | 1692912..1693040 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| GU332_RS08155 () | 1693098..1694117 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| GU332_RS08160 () | 1694129..1695343 | - | 1215 | WP_001721413.1 | starvation-sensing protein RspA | - |
| GU332_RS08165 () | 1695549..1695875 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| GU332_RS08170 () | 1696010..1696351 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| GU332_RS08175 () | 1696386..1696946 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| GU332_RS08180 () | 1696949..1697659 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| GU332_RS08185 () | 1697767..1698072 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| GU332_RS08190 () | 1698271..1700697 | + | 2427 | WP_001551145.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|