MGE detailed information
MGE type: Prophage MGE length: 47598 bp
Accession: NZ_CP047600 Location: 448258..495855 Organism: Escherichia coli O84:H7 strain Trh52 Replicon: chromosome
Accession: NZ_CP047600 Location: 448258..495855 Organism: Escherichia coli O84:H7 strain Trh52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUK18_RS02235 () | 444308..445291 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| GUK18_RS02240 () | 445769..447142 | + | 1374 | WP_000123770.1 | ATP-dependent RNA helicase DbpA | - |
| GUK18_RS02245 () | 447271..448206 | - | 936 | WP_001157378.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| GUK18_RS02250 () | 448258..449493 | - | 1236 | WP_023568506.1 | Putative defective protein IntQ ; Integrase | Integrase |
| GUK18_RS02255 () | 449495..449710 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| GUK18_RS02260 () | 449810..449998 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 449814..449992 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 449814..449992 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 449814..449992 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 449814..449992 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| GUK18_RS02265 () | 449991..450185 | - | 195 | WP_097769663.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| GUK18_RS02270 () | 450242..451051 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| GUK18_RS02275 () | 451044..453695 | - | 2652 | WP_097769662.1 | exodeoxyribonuclease VIII | - |
| GUK18_RS02280 () | 453794..454069 | - | 276 | WP_021555295.1 | phage protein | - |
| GUK18_RS02285 () | 454143..454319 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| GUK18_RS02290 () | 454313..454534 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| GUK18_RS02295 () | 454975..455463 | + | 489 | WP_016233015.1 | superinfection exclusion B family protein | - |
| GUK18_RS02300 () | 455460..455615 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| GUK18_RS02305 () | 456068..456544 | - | 477 | WP_001531660.1 | DNA-binding transcriptional repressor RacR | - |
| GUK18_RS02310 () | 456668..456964 | + | 297 | WP_016233016.1 | toxin YdaS | - |
| GUK18_RS02315 () | 456987..457409 | + | 423 | WP_000693797.1 | phage protein | - |
| GUK18_RS02320 () | 457422..458279 | + | 858 | WP_016233018.1 | DUF1376 domain-containing protein | - |
| GUK18_RS02325 () | 458286..459032 | + | 747 | WP_203164400.1 | ATP-binding protein | - |
| GUK18_RS02330 () | 459055..459816 | + | 762 | WP_203164401.1 | DUF1627 domain-containing protein | - |
| GUK18_RS02335 () | 459832..460263 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| GUK18_RS02340 () | 460457..461611 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| GUK18_RS02345 () | 461586..463850 | + | 2265 | WP_053883961.1 | S8 family peptidase | - |
| GUK18_RS02350 () | 464267..464866 | + | 600 | WP_000940322.1 | DUF1367 family protein | - |
| GUK18_RS02355 () | 464866..465156 | + | 291 | WP_016233021.1 | DUF1364 domain-containing protein | - |
| GUK18_RS02360 () | 465153..465689 | + | 537 | WP_086611546.1 | DUF1133 family protein | - |
| GUK18_RS02375 () | 466979..467194 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| GUK18_RS02380 () | 467194..467691 | + | 498 | WP_001135280.1 | lysozyme RrrD | - |
| GUK18_RS02385 () | 467908..468093 | + | 186 | WP_077637407.1 | Rz1 family lipoprotein | - |
| GUK18_RS02390 () | 468290..469747 | + | 1458 | WP_105455790.1 | Trk system potassium transporter TrkG | - |
| GUK18_RS02395 () | 469885..470676 | + | 792 | WP_016233024.1 | ParB/Srx family N-terminal domain-containing protein | - |
| GUK18_RS02400 () | 470669..471601 | + | 933 | WP_203164402.1 | hypothetical protein | - |
| GUK18_RS02405 () | 471537..471788 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| GUK18_RS02410 () | 471792..472886 | + | 1095 | WP_016233025.1 | terminase small subunit | - |
| GUK18_RS02415 () | 472867..474168 | + | 1302 | WP_016233026.1 | terminase family protein | - |
| GUK18_RS02420 () | 474171..475577 | + | 1407 | WP_024043994.1 | DUF4055 domain-containing protein | - |
| GUK18_RS02425 () | 475561..476673 | + | 1113 | WP_203164485.1 | hypothetical protein | - |
| GUK18_RS02430 () | 476778..477542 | + | 765 | WP_000770040.1 | hypothetical protein | - |
| GUK18_RS02435 () | 477641..478780 | + | 1140 | WP_001526967.1 | hypothetical protein | - |
| GUK18_RS02440 () | 478823..479047 | + | 225 | WP_000908083.1 | hypothetical protein | - |
| GUK18_RS02445 () | 479051..479446 | + | 396 | WP_016233029.1 | hypothetical protein | - |
| GUK18_RS02450 () | 479446..479829 | + | 384 | WP_000524263.1 | hypothetical protein | - |
| GUK18_RS02455 () | 479830..480210 | + | 381 | WP_001029818.1 | hypothetical protein | - |
| GUK18_RS02460 () | 480207..480599 | + | 393 | WP_000144682.1 | hypothetical protein | - |
| GUK18_RS02465 () | 480626..481588 | + | 963 | WP_024216582.1 | hypothetical protein | - |
| GUK18_RS02470 () | 481739..482098 | + | 360 | WP_122988443.1 | hypothetical protein | - |
| GUK18_RS02475 () | 482570..485803 | + | 3234 | WP_016233032.1 | phage tail tape measure protein | - |
| GUK18_RS02480 () | 485796..486134 | + | 339 | WP_000024053.1 | phage tail protein | - |
| GUK18_RS02485 () | 486134..486832 | + | 699 | WP_021540947.1 | phage minor tail protein L | - |
| GUK18_RS02490 () | 486838..487581 | + | 744 | WP_203164403.1 | C40 family peptidase | - |
| GUK18_RS02495 () | 487479..488126 | + | 648 | WP_203164404.1 | tail assembly protein | - |
| GUK18_RS02500 () | 488187..491600 | + | 3414 | WP_203164405.1 | host specificity protein J | - |
| GUK18_RS02505 () | 491671..492270 | + | 600 | WP_001233073.1 | Outer membrane protein X | VF |
| GUK18_RS02510 () | 492335..495274 | + | 2940 | WP_203164406.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GUK18_RS02515 () | 495274..495855 | + | 582 | WP_203164407.1 | tail fiber assembly protein | - |
| GUK18_RS02520 () | 496422..497135 | + | 714 | WP_000358618.1 | cytolethal distending toxin type I subunit CdtA | - |
| GUK18_RS02525 () | 497132..497953 | + | 822 | WP_000734594.1 | cytolethal distending toxin type IV nuclease subunit CdtB | - |
| GUK18_RS02530 () | 497950..498522 | + | 573 | WP_001516442.1 | cytolethal distending toxin type IV subunit CdtC | - |
| GUK18_RS02535 () | 498592..500076 | - | 1485 | WP_098712827.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|