MGE detailed information
MGE type: Genomic_island MGE length: 30654 bp
Accession: NZ_CP047594 Location: 2172331..2202984 Organism: Escherichia coli strain LD27-1 Replicon: chromosome
Accession: NZ_CP047594 Location: 2172331..2202984 Organism: Escherichia coli strain LD27-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU88_RS10535 () | 2168503..2170038 | - | 1536 | WP_000246019.1 | acid resistance gamma-aminobutyrate antiporter GadC | - |
| GUU88_RS10540 () | 2170194..2171594 | - | 1401 | WP_000358930.1 | glutamate decarboxylase | - |
| GUU88_RS10545 () | 2171956..2172279 | - | 324 | WP_201744553.1 | hypothetical protein | - |
| GUU88_RS10550 () | 2172331..2173539 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| GUU88_RS10555 () | 2173552..2176077 | - | 2526 | Protein_2059 | insulinase family protein | - |
| GUU88_RS10560 () | 2176134..2178506 | - | 2373 | WP_029393291.1 | TonB-dependent receptor plug domain-containing protein | - |
| GUU88_RS10565 () | 2178544..2179488 | - | 945 | Protein_2061 | ABC transporter ATP-binding protein/permease | - |
| GUU88_RS10570 () | 2179594..2180802 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| GUU88_RS10575 () | 2180815..2181567 | - | 753 | Protein_2063 | ABC transporter ATP-binding protein/permease | - |
| GUU88_RS10580 () | 2181770..2181892 | + | 123 | WP_120795387.1 | protein YneP | - |
| GUU88_RS10585 () | 2181858..2183015 | - | 1158 | WP_029393287.1 | anaerobic sulfatase maturase | - |
| GUU88_RS10590 () | 2183067..2184749 | - | 1683 | WP_001295684.1 | sulfatase | - |
| GUU88_RS10595 () | 2185151..2185912 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| GUU88_RS10600 () | 2185987..2186184 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| GUU88_RS10605 () | 2186432..2188711 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| GUU88_RS10610 () | 2189045..2189959 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| GUU88_RS10615 () | 2190018..2190521 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| GUU88_RS10620 () | 2190534..2191064 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| GUU88_RS10625 () | 2191078..2192304 | - | 1227 | Protein_2073 | Outer membrane usher protein FimD | VF |
| GUU88_RS10630 () | 2192559..2192767 | - | 209 | Protein_2074 | helix-turn-helix transcriptional regulator | - |
| GUU88_RS10640 () | 2194199..2197875 | + | 3677 | Protein_2076 | hypothetical protein | VF |
| GUU88_RS10645 () | 2198098..2198364 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| GUU88_RS10650 () | 2198364..2199686 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| GUU88_RS10655 () | 2199996..2201224 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| GUU88_RS10660 () | 2201236..2202984 | - | 1749 | Protein_2080 | transporter | - |
| GUU88_RS10665 () | 2203515..2205107 | - | 1593 | WP_000113108.1 | autoinducer-2 kinase | - |
| GUU88_RS10670 () | 2205186..2206139 | - | 954 | WP_000154342.1 | transcriptional regulator LsrR | - |
| GUU88_RS10675 () | 2206388..2207923 | + | 1536 | WP_001194860.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|