MGE detailed information
MGE type: Prophage MGE length: 34973 bp
Accession: NZ_CP047594 Location: 1995263..2030235 Organism: Escherichia coli strain LD27-1 Replicon: chromosome
Accession: NZ_CP047594 Location: 1995263..2030235 Organism: Escherichia coli strain LD27-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU88_RS09735 () | 1990769..1992295 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| GUU88_RS09740 () | 1992332..1993777 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| GUU88_RS09745 () | 1993777..1995087 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| GUU88_RS09750 () | 1995263..1996171 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| GUU88_RS09755 () | 1996501..1997064 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| GUU88_RS09760 () | 1997085..1998317 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| GUU88_RS09765 () | 1998572..1999555 | + | 984 | WP_072656967.1 | zinc transporter ZntB | - |
| GUU88_RS09770 () | 2000033..2001406 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| GUU88_RS09775 () | 2001499..2002434 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| GUU88_RS09780 () | 2002486..2003721 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| GUU88_RS09785 () | 2003723..2003938 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| GUU88_RS09790 () | 2004017..2004226 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2004042..2004220 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2004042..2004220 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2004042..2004220 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2004042..2004220 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| GUU88_RS09795 () | 2004219..2004413 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| GUU88_RS09800 () | 2004470..2005279 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| GUU88_RS09805 () | 2005272..2007296 | - | 2025 | Protein_1908 | exodeoxyribonuclease VIII | - |
| GUU88_RS09810 () | 2007259..2008083 | + | 825 | WP_071788686.1 | DUF1376 domain-containing protein | - |
| GUU88_RS09815 () | 2008090..2008836 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| GUU88_RS09820 () | 2008859..2009620 | + | 762 | WP_000450662.1 | DUF1627 domain-containing protein | - |
| GUU88_RS09825 () | 2009636..2010013 | + | 378 | WP_001141106.1 | DUF977 family protein | - |
| GUU88_RS09830 () | 2010287..2010820 | - | 534 | WP_001741601.1 | TetR/AcrR family transcriptional regulator | - |
| GUU88_RS09835 () | 2011035..2012015 | + | 981 | WP_072656966.1 | adenosine deaminase | - |
| GUU88_RS09840 () | 2012012..2012566 | + | 555 | WP_001026099.1 | hypothetical protein | - |
| GUU88_RS09845 () | 2012566..2013360 | + | 795 | WP_000436711.1 | SIR2 family protein | - |
| GUU88_RS09850 () | 2014123..2014461 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| GUU88_RS09855 () | 2015275..2015874 | + | 600 | WP_001702268.1 | DUF1367 family protein | - |
| GUU88_RS09860 () | 2015874..2016164 | + | 291 | WP_001741607.1 | DUF1364 domain-containing protein | - |
| GUU88_RS09865 () | 2016161..2016703 | + | 543 | WP_000640144.1 | DUF1133 family protein | - |
| GUU88_RS09870 () | 2016925..2017494 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| GUU88_RS09875 () | 2017463..2017765 | - | 303 | WP_052921396.1 | hypothetical protein | - |
| GUU88_RS09885 () | 2019289..2019630 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| GUU88_RS09890 () | 2019634..2020110 | + | 477 | WP_001194112.1 | glycoside hydrolase family protein | - |
| GUU88_RS09895 () | 2020327..2020512 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| GUU88_RS09900 () | 2020709..2022166 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| GUU88_RS09905 () | 2022304..2022567 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| GUU88_RS09910 () | 2022548..2022907 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| GUU88_RS09915 () | 2023381..2024313 | + | 933 | Protein_1930 | phage tail length tape measure family protein | - |
| GUU88_RS09920 () | 2024316..2024417 | + | 102 | Protein_1931 | IS5 family transposase ISKpn26 | Transposase |
| GUU88_RS09925 () | 2024409..2025287 | - | 879 | Protein_1932 | IS5 family transposase ISKpn26 | Transposase |
| GUU88_RS09930 () | 2025357..2025545 | + | 189 | Protein_1933 | Ail/Lom family outer membrane beta-barrel protein | - |
| GUU88_RS09935 () | 2025610..2028972 | + | 3363 | WP_160194479.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GUU88_RS09940 () | 2028972..2029547 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| GUU88_RS09945 () | 2029645..2030235 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GUU88_RS09950 () | 2030552..2030785 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| GUU88_RS09955 () | 2030854..2030967 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| GUU88_RS09960 () | 2031746..2032180 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| GUU88_RS09965 () | 2032321..2033454 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|