MGE detailed information
MGE type: IScluster/Tn MGE length: 32163 bp
Accession: NZ_CP047573 Location: 48688..80850 Organism: Escherichia coli strain 2EC1 Replicon: plasmid p2EC1-2
Accession: NZ_CP047573 Location: 48688..80850 Organism: Escherichia coli strain 2EC1 Replicon: plasmid p2EC1-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTQ78_RS22940 () | 44076..44777 | + | 702 | WP_174235733.1 | RepA protein | - |
| GTQ78_RS22945 () | 45724..46059 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| GTQ78_RS22950 () | 46232..46513 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| GTQ78_RS22955 () | 46567..47178 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| GTQ78_RS23780 () | 47175..47336 | - | 162 | WP_001326844.1 | hypothetical protein | - |
| GTQ78_RS22960 () | 47363..48355 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| GTQ78_RS23785 () | 48404..48559 | - | 156 | WP_000075580.1 | hypothetical protein | - |
| GTQ78_RS22965 () | 48700..49404 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22970 () | 49466..49663 | - | 198 | WP_000844102.1 | hypothetical protein | - |
| GTQ78_RS22975 () | 49668..50309 | - | 642 | WP_001694850.1 | restriction endonuclease | - |
| GTQ78_RS22980 () | 50384..52693 | - | 2310 | Protein_64 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| GTQ78_RS22985 () | 52747..53451 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22990 () | 54557..54808 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| GTQ78_RS22995 () | 54798..55079 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GTQ78_RS23000 () | 55154..55851 | + | 698 | Protein_68 | IS1 family transposase IS1S | Transposase |
| GTQ78_RS23005 () | 55997..56254 | + | 258 | WP_105278499.1 | hypothetical protein | - |
| GTQ78_RS23010 () | 56291..57259 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| GTQ78_RS23015 () | 57294..57539 | + | 246 | Protein_71 | peptidoglycan DD-metalloendopeptidase family protein | - |
| GTQ78_RS23020 () | 57576..58280 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23025 () | 58369..59082 | + | 714 | WP_001452812.1 | DUF3363 domain-containing protein | - |
| GTQ78_RS23030 () | 59299..60513 | + | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| GTQ78_RS23035 () | 60541..60846 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GTQ78_RS23040 () | 60958..61146 | + | 189 | Protein_76 | IS91 family transposase | - |
| GTQ78_RS23045 () | 61113..62285 | - | 1173 | WP_160177693.1 | Tetracycline resistance protein, class C | ARG |
| GTQ78_RS23050 () | 62338..63042 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23055 () | 63054..64058 | - | 1005 | WP_148245962.1 | IS91 family transposase ISAzo26 | Transposase |
| GTQ78_RS23060 () | 64214..64687 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| GTQ78_RS23065 () | 64871..64963 | + | 93 | Protein_81 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| GTQ78_RS23070 () | 65016..65720 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23075 () | 65789..66673 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| GTQ78_RS23080 () | 66705..67904 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| GTQ78_RS23085 () | 68010..68660 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GTQ78_RS23090 () | 68692..68934 | - | 243 | WP_000844627.1 | transposase | - |
| GTQ78_RS23095 () | 69052..69642 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| GTQ78_RS23100 () | 69779..70351 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| GTQ78_RS23105 () | 70388..71779 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| GTQ78_RS23110 () | 71812..72240 | + | 429 | Protein_90 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| GTQ78_RS23115 () | 72559..73215 | - | 657 | WP_064186845.1 | Pentapeptide repeat protein | ARG |
| GTQ78_RS23120 () | 73610..74226 | + | 617 | Protein_92 | transposase | - |
| GTQ78_RS23125 () | 74293..74997 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23130 () | 75190..75597 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| GTQ78_RS23135 () | 75586..76347 | + | 762 | Protein_95 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GTQ78_RS23140 () | 76383..77465 | - | 1083 | Protein_96 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GTQ78_RS23145 () | 77520..78224 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23150 () | 78286..78879 | - | 594 | Protein_98 | IS4 family transposase IS186B | Transposase |
| GTQ78_RS23155 () | 78968..79957 | - | 990 | WP_052935737.1 | IS91 family transposase ISWz1 | Transposase |
| GTQ78_RS23160 () | 80347..81044 | - | 698 | Protein_100 | IS1 family transposase IS1S | Transposase |
| GTQ78_RS23165 () | 81099..81371 | - | 273 | Protein_101 | RepA protein | - |
| GTQ78_RS23170 () | 81644..83362 | - | 1719 | WP_063116709.1 | hybrid sensor histidine kinase/response regulator | - |
| GTQ78_RS23175 () | 83359..83847 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| GTQ78_RS23180 () | 83840..84823 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| GTQ78_RS23185 () | 84827..85741 | - | 915 | WP_000891983.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|