MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 113013 bp
Accession: NZ_CP047573 Location: 1..113013 Organism: Escherichia coli strain 2EC1 Replicon: plasmid p2EC1-2
Accession: NZ_CP047573 Location: 1..113013 Organism: Escherichia coli strain 2EC1 Replicon: plasmid p2EC1-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTQ78_RS22690 () | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| GTQ78_RS22695 () | 1177..1590 | - | 414 | Protein_1 | Tn3 family transposase | - |
| GTQ78_RS22700 () | 1769..2968 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| GTQ78_RS22705 () | 2978..3166 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| GTQ78_RS23760 () | 3396..3500 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| GTQ78_RS22710 () | 3629..3886 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| GTQ78_RS22715 () | 3944..4720 | - | 777 | WP_160177684.1 | site-specific integrase | - |
| GTQ78_RS22720 () | 4732..5418 | - | 687 | WP_020956882.1 | hypothetical protein | - |
| GTQ78_RS22725 () | 5482..5775 | - | 294 | WP_020956883.1 | hypothetical protein | - |
| GTQ78_RS23765 () | 5934..6395 | - | 462 | WP_074193041.1 | hypothetical protein | - |
| GTQ78_RS22730 () | 6352..6582 | + | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GTQ78_RS22735 () | 6579..6995 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GTQ78_RS22740 () | 7069..8631 | + | 1563 | WP_004206609.1 | AAA family ATPase | - |
| GTQ78_RS22745 () | 8616..9638 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| GTQ78_RS22750 () | 10176..11090 | + | 915 | WP_031592169.1 | HNH endonuclease | - |
| GTQ78_RS22755 () | 11276..11626 | - | 351 | WP_004187110.1 | DUF305 domain-containing protein | - |
| GTQ78_RS22760 () | 11774..12205 | - | 432 | WP_004187113.1 | silver-binding protein SilE | - |
| GTQ78_RS22765 () | 12456..13931 | - | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| GTQ78_RS22770 () | 13924..14604 | - | 681 | WP_065801211.1 | Transcriptional regulatory protein CusR | VF |
| GTQ78_RS22775 () | 14794..16179 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| GTQ78_RS22780 () | 16208..16561 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| GTQ78_RS22785 () | 16675..17967 | + | 1293 | WP_032413333.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| GTQ78_RS22790 () | 17978..21124 | + | 3147 | WP_020219104.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| GTQ78_RS22795 () | 21211..21651 | + | 441 | WP_000758229.1 | hypothetical protein | - |
| GTQ78_RS22800 () | 21749..24226 | + | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| GTQ78_RS22805 () | 24267..24464 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| GTQ78_RS22810 () | 24615..25319 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22815 () | 25383..27164 | - | 1782 | Protein_27 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GTQ78_RS22820 () | 27217..27921 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22825 () | 27985..28314 | + | 330 | Protein_29 | IS91 family transposase ISVsa3 | Transposase |
| GTQ78_RS22830 () | 28345..28578 | + | 234 | WP_072042932.1 | hypothetical protein | - |
| GTQ78_RS22835 () | 28779..29621 | + | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| GTQ78_RS22840 () | 29710..30501 | + | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GTQ78_RS22845 () | 30671..31003 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| GTQ78_RS22850 () | 31268..31903 | - | 636 | Protein_34 | IS256 family transposase IS406 | Transposase |
| GTQ78_RS23770 () | 31905..32180 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| GTQ78_RS22855 () | 32183..32974 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| GTQ78_RS22860 () | 33443..33688 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| GTQ78_RS22865 () | 33726..34589 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| GTQ78_RS22870 () | 34735..34974 | - | 240 | WP_011264039.1 | macrolide transporter | - |
| GTQ78_RS22875 () | 35047..35751 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22880 () | 35810..36418 | + | 609 | WP_110918390.1 | Mobilization protein A | Relaxase |
| GTQ78_RS22885 () | 36431..37291 | + | 861 | WP_038988887.1 | hypothetical protein | - |
| GTQ78_RS22890 () | 37370..37519 | + | 150 | WP_160177685.1 | hypothetical protein | - |
| GTQ78_RS22895 () | 37516..37863 | + | 348 | WP_038988888.1 | hypothetical protein | - |
| GTQ78_RS23775 () | 37878..37943 | + | 66 | Protein_45 | EAL domain-containing protein | - |
| GTQ78_RS22900 () | 38083..38256 | - | 174 | Protein_46 | IS6 family transposase | - |
| GTQ78_RS22905 () | 38258..38704 | - | 447 | WP_038988891.1 | DMT family transporter | - |
| GTQ78_RS22910 () | 38821..39618 | - | 798 | Protein_48 | Tn3 family transposase TnpA_IS3000 | Transposase |
| GTQ78_RS22915 () | 39671..40375 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22920 () | 40628..41332 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22925 () | 41393..41545 | - | 153 | Protein_51 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GTQ78_RS22930 () | 41709..42266 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GTQ78_RS22935 () | 42449..43309 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GTQ78_RS22940 () | 44076..44777 | + | 702 | WP_174235733.1 | RepA protein | - |
| GTQ78_RS22945 () | 45724..46059 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| GTQ78_RS22950 () | 46232..46513 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| GTQ78_RS22955 () | 46567..47178 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| GTQ78_RS23780 () | 47175..47336 | - | 162 | WP_001326844.1 | hypothetical protein | VF |
| GTQ78_RS22960 () | 47363..48355 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| GTQ78_RS23785 () | 48404..48559 | - | 156 | WP_000075580.1 | hypothetical protein | - |
| GTQ78_RS22965 () | 48700..49404 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22970 () | 49466..49663 | - | 198 | WP_000844102.1 | hypothetical protein | - |
| GTQ78_RS22975 () | 49668..50309 | - | 642 | WP_001694850.1 | restriction endonuclease | - |
| GTQ78_RS22980 () | 50384..52693 | - | 2310 | Protein_64 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| GTQ78_RS22985 () | 52747..53451 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22990 () | 54557..54808 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| GTQ78_RS22995 () | 54798..55079 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GTQ78_RS23000 () | 55154..55851 | + | 698 | Protein_68 | IS1 family transposase IS1S | Transposase |
| GTQ78_RS23005 () | 55997..56254 | + | 258 | WP_105278499.1 | hypothetical protein | - |
| GTQ78_RS23010 () | 56291..57259 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| GTQ78_RS23015 () | 57294..57539 | + | 246 | Protein_71 | peptidoglycan DD-metalloendopeptidase family protein | - |
| GTQ78_RS23020 () | 57576..58280 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23025 () | 58369..59082 | + | 714 | WP_001452812.1 | DUF3363 domain-containing protein | - |
| GTQ78_RS23030 () | 59299..60513 | + | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| GTQ78_RS23035 () | 60541..60846 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GTQ78_RS23040 () | 60958..61146 | + | 189 | Protein_76 | IS91 family transposase | - |
| GTQ78_RS23045 () | 61113..62285 | - | 1173 | WP_160177693.1 | Tetracycline resistance protein, class C | ARG |
| GTQ78_RS23050 () | 62338..63042 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23055 () | 63054..64058 | - | 1005 | WP_148245962.1 | IS91 family transposase ISAzo26 | Transposase |
| GTQ78_RS23060 () | 64214..64687 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| GTQ78_RS23065 () | 64871..64963 | + | 93 | Protein_81 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| GTQ78_RS23070 () | 65016..65720 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23075 () | 65789..66673 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| GTQ78_RS23080 () | 66705..67904 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| GTQ78_RS23085 () | 68010..68660 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GTQ78_RS23090 () | 68692..68934 | - | 243 | WP_000844627.1 | transposase | - |
| GTQ78_RS23095 () | 69052..69642 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| GTQ78_RS23100 () | 69779..70351 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| GTQ78_RS23105 () | 70388..71779 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| GTQ78_RS23110 () | 71812..72240 | + | 429 | Protein_90 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| GTQ78_RS23115 () | 72559..73215 | - | 657 | WP_064186845.1 | Pentapeptide repeat protein | ARG |
| GTQ78_RS23120 () | 73610..74226 | + | 617 | Protein_92 | transposase | - |
| GTQ78_RS23125 () | 74293..74997 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23130 () | 75190..75597 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| GTQ78_RS23135 () | 75586..76347 | + | 762 | Protein_95 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GTQ78_RS23140 () | 76383..77465 | - | 1083 | Protein_96 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GTQ78_RS23145 () | 77520..78224 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS23150 () | 78286..78879 | - | 594 | Protein_98 | IS4 family transposase IS186B | Transposase |
| GTQ78_RS23155 () | 78968..79957 | - | 990 | WP_052935737.1 | IS91 family transposase ISWz1 | Transposase |
| GTQ78_RS23160 () | 80347..81044 | - | 698 | Protein_100 | IS1 family transposase IS1S | Transposase |
| GTQ78_RS23165 () | 81099..81371 | - | 273 | Protein_101 | RepA protein | - |
| GTQ78_RS23170 () | 81644..83362 | - | 1719 | WP_063116709.1 | hybrid sensor histidine kinase/response regulator | - |
| GTQ78_RS23175 () | 83359..83847 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| GTQ78_RS23180 () | 83840..84823 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| GTQ78_RS23185 () | 84827..85741 | - | 915 | WP_000891983.1 | response regulator | - |
| GTQ78_RS23190 () | 86055..86363 | + | 309 | WP_160177686.1 | hypothetical protein | - |
| GTQ78_RS23195 () | 86356..86571 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| GTQ78_RS23200 () | 86574..87236 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| GTQ78_RS23205 () | 87247..87546 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| GTQ78_RS23210 () | 87556..90306 | + | 2751 | WP_017694776.1 | Type IV secretion system protein virB4 | VF |
| GTQ78_RS23215 () | 90325..91041 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| GTQ78_RS23220 () | 91053..91337 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| GTQ78_RS23225 () | 91355..92362 | + | 1008 | WP_160177687.1 | type IV secretion system protein | - |
| GTQ78_RS23790 () | 92439..92579 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| GTQ78_RS23230 () | 92572..93258 | + | 687 | WP_023281070.1 | type IV secretion system protein | - |
| GTQ78_RS23235 () | 93251..94144 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| GTQ78_RS23240 () | 94141..95337 | + | 1197 | WP_160177688.1 | Type IV secretion system protein virB10 | VF |
| GTQ78_RS23245 () | 95341..96390 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| GTQ78_RS23250 () | 96377..96778 | + | 402 | WP_001776111.1 | hypothetical protein | - |
| GTQ78_RS23255 () | 96869..97186 | + | 318 | WP_023281072.1 | hypothetical protein | - |
| GTQ78_RS23260 () | 97213..97548 | + | 336 | WP_001776113.1 | hypothetical protein | - |
| GTQ78_RS23265 () | 97524..97832 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| GTQ78_RS23270 () | 97829..100030 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| GTQ78_RS23275 () | 100027..100419 | + | 393 | WP_160177689.1 | H-NS histone family protein | - |
| GTQ78_RS23280 () | 101128..103035 | + | 1908 | WP_023281074.1 | TraM recognition domain-containing protein | - |
| GTQ78_RS23285 () | 103050..103796 | + | 747 | WP_160177690.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| GTQ78_RS23290 () | 103789..104316 | + | 528 | WP_001232861.1 | Phospholipase D | VF |
| GTQ78_RS23295 () | 104348..104779 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| GTQ78_RS23300 () | 104911..105084 | - | 174 | WP_160177691.1 | hypothetical protein | - |
| GTQ78_RS23305 () | 105256..106221 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| GTQ78_RS23310 () | 106673..107098 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GTQ78_RS23315 () | 107098..108369 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| GTQ78_RS23320 () | 108448..108699 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| GTQ78_RS23325 () | 108753..109058 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| GTQ78_RS23330 () | 110136..111107 | - | 972 | WP_160177692.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GTQ78_RS23335 () | 111107..112273 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|