MGE detailed information
MGE type: Conjugative plasmid MGE length: 127645 bp
Accession: NZ_CP047572 Location: 1..127645 Organism: Escherichia coli strain 2EC1 Replicon: plasmid p2EC1-1
Accession: NZ_CP047572 Location: 1..127645 Organism: Escherichia coli strain 2EC1 Replicon: plasmid p2EC1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTQ78_RS21980 () | 46..1077 | + | 1032 | WP_000907868.1 | replication initiation protein | - |
| GTQ78_RS23730 () | 1774..1932 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| GTQ78_RS21985 () | 1987..2256 | + | 270 | WP_021559054.1 | hypothetical protein | Antitoxin Detail |
| GTQ78_RS21990 () | 2253..2534 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GTQ78_RS21995 () | 2720..3004 | + | 285 | WP_001407321.1 | ribbon-helix-helix domain-containing protein | - |
| GTQ78_RS22000 () | 3004..3281 | + | 278 | Protein_5 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTQ78_RS22005 () | 3377..3634 | + | 258 | WP_001685860.1 | hypothetical protein | - |
| GTQ78_RS22010 () | 3636..4343 | + | 708 | WP_058100829.1 | hypothetical protein | - |
| GTQ78_RS22015 () | 4347..4808 | + | 462 | WP_024172415.1 | hypothetical protein | - |
| GTQ78_RS22020 () | 5114..5587 | - | 474 | WP_058100828.1 | hypothetical protein | - |
| GTQ78_RS22025 () | 5764..6624 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GTQ78_RS22030 () | 6867..7571 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GTQ78_RS22035 () | 7685..8461 | + | 777 | WP_001199192.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| GTQ78_RS22040 () | 8690..9715 | + | 1026 | WP_000742814.1 | Hygromycin-B 4-O-kinase | ARG |
| GTQ78_RS22045 () | 9721..10086 | + | 366 | Protein_14 | AAC(3) family N-acetyltransferase | - |
| GTQ78_RS22050 () | 10137..10889 | - | 753 | WP_000602738.1 | IS6 family transposase | - |
| GTQ78_RS22055 () | 10975..12474 | + | 1500 | Protein_16 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| GTQ78_RS22060 () | 12471..13745 | - | 1275 | WP_075322286.1 | IS91 family transposase ISVsa3 | Transposase |
| GTQ78_RS22065 () | 13820..14593 | - | 774 | WP_001053381.1 | IS21 family transposase ISEc57 | Transposase |
| GTQ78_RS22070 () | 14593..15618 | - | 1026 | WP_021545039.1 | IS21 family transposase ISEc57 | Transposase |
| GTQ78_RS22075 () | 15707..15868 | - | 162 | Protein_20 | IS91 family transposase | - |
| GTQ78_RS22080 () | 16207..17364 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| GTQ78_RS22085 () | 17354..18199 | - | 846 | WP_164538741.1 | alpha/beta fold hydrolase | - |
| GTQ78_RS23735 () | 18617..18754 | + | 138 | WP_164538590.1 | hypothetical protein | - |
| GTQ78_RS22090 () | 18748..18951 | - | 204 | Protein_24 | hypothetical protein | - |
| GTQ78_RS22095 () | 18982..20475 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GTQ78_RS22100 () | 20587..20892 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GTQ78_RS22105 () | 20920..22134 | - | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| GTQ78_RS22110 () | 22351..23235 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| GTQ78_RS22115 () | 23266..24189 | - | 924 | WP_000898043.1 | IS91 family transposase ISVsa3 | Transposase |
| GTQ78_RS22120 () | 24277..24981 | + | 705 | WP_001067858.1 | IS91 family transposase ISVsa3 | Transposase |
| GTQ78_RS22125 () | 25061..25510 | + | 450 | Protein_31 | PAS domain-containing protein | - |
| GTQ78_RS22130 () | 25578..26675 | - | 1098 | Protein_32 | TonB-dependent receptor | - |
| GTQ78_RS22135 () | 26732..27700 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| GTQ78_RS22140 () | 27735..28610 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| GTQ78_RS22145 () | 28860..29051 | - | 192 | Protein_35 | transposase | - |
| GTQ78_RS22150 () | 29115..29741 | - | 627 | WP_000434930.1 | hypothetical protein | - |
| GTQ78_RS22155 () | 29838..30542 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| GTQ78_RS22160 () | 30600..31124 | + | 525 | Protein_38 | sulfite exporter TauE/SafE family protein | - |
| GTQ78_RS22165 () | 31187..31555 | + | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| GTQ78_RS22170 () | 31629..33380 | - | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| GTQ78_RS22175 () | 33407..33769 | - | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| GTQ78_RS22180 () | 33845..34390 | - | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| GTQ78_RS22185 () | 34399..35109 | - | 711 | WP_024159726.1 | arsenical resistance protein ArsH | - |
| GTQ78_RS22190 () | 35210..35533 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| GTQ78_RS22195 () | 35638..36675 | + | 1038 | WP_044502555.1 | permease | - |
| GTQ78_RS22200 () | 36968..37585 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| GTQ78_RS22205 () | 37776..39332 | - | 1557 | WP_058649952.1 | AAA family ATPase | - |
| GTQ78_RS22210 () | 39595..40185 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| GTQ78_RS22215 () | 40185..40442 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| GTQ78_RS22220 () | 40796..42934 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| GTQ78_RS22225 () | 43096..43512 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GTQ78_RS22230 () | 43509..43739 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GTQ78_RS22235 () | 44047..45612 | + | 1566 | WP_000741348.1 | ATP-binding protein | - |
| GTQ78_RS22240 () | 45669..46538 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| GTQ78_RS22245 () | 46540..47628 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| GTQ78_RS22250 () | 47926..48858 | - | 933 | WP_000991830.1 | hypothetical protein | - |
| GTQ78_RS22255 () | 48862..49857 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| GTQ78_RS22260 () | 50538..50852 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| GTQ78_RS22265 () | 50905..51684 | + | 780 | WP_000535297.1 | hypothetical protein | - |
| GTQ78_RS22270 () | 51735..52514 | + | 780 | WP_001302707.1 | site-specific integrase | - |
| GTQ78_RS22275 () | 52652..52927 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| GTQ78_RS22280 () | 52921..53565 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| GTQ78_RS22285 () | 53794..54765 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| GTQ78_RS22290 () | 54770..55162 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| GTQ78_RS22295 () | 55167..56438 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| GTQ78_RS22300 () | 56438..56875 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GTQ78_RS22305 () | 56872..57120 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| GTQ78_RS22310 () | 57538..58440 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| GTQ78_RS22315 () | 58437..58749 | + | 313 | Protein_69 | hypothetical protein | - |
| GTQ78_RS22320 () | 58825..59508 | + | 684 | WP_000086137.1 | DNA methylase | - |
| GTQ78_RS22325 () | 59509..59730 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| GTQ78_RS22330 () | 59744..60178 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| GTQ78_RS23740 () | 60223..60981 | + | 759 | Protein_73 | hypothetical protein | - |
| GTQ78_RS22340 () | 60866..61438 | + | 573 | WP_072686770.1 | DUF1472 domain-containing protein | - |
| GTQ78_RS22345 () | 61534..61836 | + | 303 | WP_001436678.1 | antirestriction protein | - |
| GTQ78_RS22350 () | 61883..62305 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| GTQ78_RS22355 () | 62302..62493 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| GTQ78_RS22360 () | 63264..63791 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| GTQ78_RS22365 () | 63849..64082 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| GTQ78_RS22370 () | 64141..66099 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| GTQ78_RS22375 () | 66154..66588 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| GTQ78_RS22380 () | 66585..67304 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| GTQ78_RS22385 () | 67301..67897 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| GTQ78_RS22390 () | 67969..68439 | + | 471 | WP_001671344.1 | YubH family protein | - |
| GTQ78_RS22395 () | 68360..68860 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| GTQ78_RS22400 () | 69589..70023 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| GTQ78_RS22405 () | 70116..70382 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| GTQ78_RS22410 () | 70447..71361 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| GTQ78_RS22415 () | 71361..71606 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| GTQ78_RS22420 () | 71637..71888 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| GTQ78_RS23745 () | 71922..72119 | - | 198 | WP_001161112.1 | hypothetical protein | - |
| GTQ78_RS22425 () | 72468..73316 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| GTQ78_RS22430 () | 73402..73737 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| GTQ78_RS22435 () | 73971..74303 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| GTQ78_RS22440 () | 74314..77013 | + | 2700 | WP_160177683.1 | Protein TraI | Relaxase |
| GTQ78_RS22445 () | 77050..79341 | - | 2292 | WP_001289275.1 | hypothetical protein | - |
| GTQ78_RS22450 () | 79334..80404 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| GTQ78_RS22455 () | 80423..81631 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| GTQ78_RS22460 () | 81938..83029 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 83232..83292 | - | 61 | NuclAT_0 | - | - |
| - () | 83232..83292 | - | 61 | NuclAT_0 | - | - |
| - () | 83232..83292 | - | 61 | NuclAT_0 | - | - |
| - () | 83232..83292 | - | 61 | NuclAT_0 | - | - |
| GTQ78_RS22465 () | 83344..83496 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| GTQ78_RS22470 () | 83568..83819 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| GTQ78_RS22475 () | 84119..84415 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| GTQ78_RS23750 () | 84480..84656 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| GTQ78_RS22480 () | 85048..85257 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| GTQ78_RS22485 () | 85329..85991 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| GTQ78_RS22490 () | 86062..88230 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| GTQ78_RS22495 () | 88327..88911 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| GTQ78_RS22500 () | 88940..90142 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| GTQ78_RS22505 () | 90109..90723 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| GTQ78_RS22510 () | 90723..93767 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| GTQ78_RS22515 () | 93857..94657 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| GTQ78_RS22520 () | 94641..94829 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| GTQ78_RS22525 () | 94893..95297 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| GTQ78_RS22530 () | 95348..95875 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| GTQ78_RS22535 () | 95875..96579 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| GTQ78_RS22540 () | 96579..97868 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| GTQ78_RS22545 () | 97871..98854 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| GTQ78_RS22550 () | 98865..99557 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| GTQ78_RS22555 () | 99554..99901 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| GTQ78_RS22560 () | 99919..103686 | - | 3768 | WP_058649948.1 | DNA primase | - |
| GTQ78_RS22565 () | 103776..104327 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| GTQ78_RS22570 () | 104342..104632 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| GTQ78_RS22575 () | 104629..105777 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| GTQ78_RS22580 () | 105774..106592 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| GTQ78_RS22585 () | 106589..107047 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| GTQ78_RS22590 () | 107442..108026 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| GTQ78_RS22595 () | 108086..109288 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| GTQ78_RS22600 () | 109374..110198 | - | 825 | WP_058649947.1 | hypothetical protein | - |
| GTQ78_RS22605 () | 110349..111503 | - | 1155 | WP_001139955.1 | integrase | - |
| GTQ78_RS23755 () | 112112..112309 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| GTQ78_RS22610 () | 112306..113742 | - | 1437 | WP_015058913.1 | hypothetical protein | VF |
| GTQ78_RS22615 () | 113730..114386 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| GTQ78_RS22620 () | 114371..114931 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| GTQ78_RS22625 () | 114941..115555 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| GTQ78_RS22630 () | 115572..116657 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| GTQ78_RS22635 () | 116670..118223 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| GTQ78_RS22640 () | 118234..118686 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| GTQ78_RS22645 () | 118673..119968 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| GTQ78_RS22650 () | 119961..121643 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| GTQ78_RS22655 () | 121657..122094 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| GTQ78_RS22660 () | 122094..123161 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| GTQ78_RS22665 () | 123913..124167 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| GTQ78_RS22670 () | 124339..125022 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| GTQ78_RS22675 () | 125276..125809 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| GTQ78_RS22680 () | 126251..126538 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| GTQ78_RS22685 () | 126456..126719 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|