MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP047546 Location: 2474850..2486935 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Accession: NZ_CP047546 Location: 2474850..2486935 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN28_RS12135 (2470771) | 2470771..2471973 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| DXN28_RS12140 (2471986) | 2471986..2473437 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| DXN28_RS12145 (2473581) | 2473581..2474588 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| DXN28_RS12150 (2474847) | 2474847..2476313 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| DXN28_RS12155 (2477121) | 2477121..2477835 | + | 715 | Protein_2385 | helix-turn-helix domain-containing protein | - |
| DXN28_RS12160 (2477891) | 2477891..2478799 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| DXN28_RS12165 (2478942) | 2478942..2479274 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| DXN28_RS12170 (2479264) | 2479264..2479479 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| DXN28_RS12175 (2479631) | 2479631..2479879 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN28_RS12180 (2479869) | 2479869..2480153 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DXN28_RS12185 (2480324) | 2480324..2480713 | + | 390 | WP_000194089.1 | RidA family protein | - |
| DXN28_RS12190 (2480765) | 2480765..2481844 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| DXN28_RS12195 (2482037) | 2482037..2482525 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| DXN28_RS12200 (2482570) | 2482570..2484078 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| DXN28_RS12205 (2484068) | 2484068..2485309 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| DXN28_RS12210 (2485379) | 2485379..2486935 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| DXN28_RS12215 (2487112) | 2487112..2488398 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| DXN28_RS12220 (2488373) | 2488373..2489398 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| DXN28_RS12225 (2489457) | 2489457..2490248 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| DXN28_RS12230 (2490294) | 2490294..2491385 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |