MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP047544 Location: 2511196..2523281 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Replicon: chromosome
Accession: NZ_CP047544 Location: 2511196..2523281 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN29_RS12335 (2507117) | 2507117..2508319 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| DXN29_RS12340 (2508332) | 2508332..2509783 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| DXN29_RS12345 (2509927) | 2509927..2510934 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| DXN29_RS12350 (2511193) | 2511193..2512659 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| DXN29_RS12355 (2513467) | 2513467..2514181 | + | 715 | Protein_2425 | helix-turn-helix domain-containing protein | - |
| DXN29_RS12360 (2514237) | 2514237..2515145 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| DXN29_RS12365 (2515288) | 2515288..2515620 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| DXN29_RS12370 (2515610) | 2515610..2515825 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| DXN29_RS12375 (2515977) | 2515977..2516225 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN29_RS12380 (2516215) | 2516215..2516499 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DXN29_RS12385 (2516670) | 2516670..2517059 | + | 390 | WP_000194089.1 | RidA family protein | - |
| DXN29_RS12390 (2517111) | 2517111..2518190 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| DXN29_RS12395 (2518383) | 2518383..2518871 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| DXN29_RS12400 (2518916) | 2518916..2520424 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| DXN29_RS12405 (2520414) | 2520414..2521655 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| DXN29_RS12410 (2521725) | 2521725..2523281 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| DXN29_RS12415 (2523458) | 2523458..2524744 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| DXN29_RS12420 (2524719) | 2524719..2525744 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| DXN29_RS12425 (2525803) | 2525803..2526594 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| DXN29_RS12430 (2526640) | 2526640..2527731 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |