MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP047531 Location: 1027592..1038018 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Replicon: chromosome
Accession: NZ_CP047531 Location: 1027592..1038018 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN09_RS04915 (1022705) | 1022705..1023085 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| DXN09_RS04920 (1023141) | 1023141..1025708 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| DXN09_RS04925 (1025867) | 1025867..1026388 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| DXN09_RS04930 (1026560) | 1026560..1027216 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| DXN09_RS04935 (1027563) | 1027563..1027768 | + | 206 | Protein_971 | IS5 family transposase ISEcl3 | Transposase |
| DXN09_RS04940 (1027841) | 1027841..1028368 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DXN09_RS04945 (1028365) | 1028365..1028655 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DXN09_RS04950 (1028925) | 1028925..1029103 | - | 179 | Protein_974 | IS3 family transposase | - |
| DXN09_RS04955 (1029344) | 1029344..1029670 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| DXN09_RS04960 (1029943) | 1029943..1030290 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| DXN09_RS04965 (1030275) | 1030275..1030724 | - | 450 | WP_000381610.1 | membrane protein | - |
| DXN09_RS04970 (1031155) | 1031155..1031598 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| DXN09_RS04975 (1032055) | 1032055..1032705 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| DXN09_RS04980 (1032702) | 1032702..1034390 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| DXN09_RS04985 (1034387) | 1034387..1035505 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| DXN09_RS04990 (1035530) | 1035530..1037587 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| DXN09_RS04995 (1037611) | 1037611..1038018 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| DXN09_RS05000 (1038015) | 1038015..1039310 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| DXN09_RS05005 (1039288) | 1039288..1039731 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| DXN09_RS05010 (1039731) | 1039731..1040741 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| DXN09_RS05015 (1040741) | 1040741..1041652 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| DXN09_RS05020 (1041642) | 1041642..1042316 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| DXN09_RS05025 (1042342) | 1042342..1042602 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |