MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 39811 bp
Accession: NZ_CP047495 Location: 4641211..4681021 Organism: Pectobacterium brasiliense strain 1692 Replicon: chromosome
Accession: NZ_CP047495 Location: 4641211..4681021 Organism: Pectobacterium brasiliense strain 1692 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT391_RS20725 () | 4636774..4636998 | + | 225 | WP_010279363.1 | DUF2594 family protein | - |
| GT391_RS20730 () | 4637092..4637379 | - | 288 | WP_010279359.1 | hypothetical protein | - |
| GT391_RS20740 () | 4638259..4639671 | + | 1413 | WP_010279356.1 | D-serine/D-alanine/glycine transporter | - |
| GT391_RS20745 () | 4639843..4640109 | - | 267 | WP_010279353.1 | anti-adapter protein IraP | - |
| GT391_RS20750 () | 4640502..4640771 | - | 270 | Protein_4048 | LysR family transcriptional regulator | - |
| GT391_RS20760 () | 4641388..4642659 | + | 1272 | WP_039319747.1 | hypothetical protein ; Integrase | Integrase |
| GT391_RS20765 () | 4642793..4643107 | - | 315 | WP_039319744.1 | helix-turn-helix domain-containing protein | - |
| GT391_RS20770 () | 4643293..4643607 | - | 315 | WP_039319862.1 | helix-turn-helix domain-containing protein | - |
| GT391_RS20775 () | 4643755..4644027 | + | 273 | WP_010287755.1 | helix-turn-helix domain-containing protein | - |
| GT391_RS20780 () | 4644445..4645359 | + | 915 | WP_159398230.1 | hypothetical protein | - |
| GT391_RS20785 () | 4645513..4645707 | + | 195 | WP_025918863.1 | AlpA family transcriptional regulator | - |
| GT391_RS20790 () | 4645724..4646308 | + | 585 | WP_159398231.1 | DUF2857 domain-containing protein | - |
| GT391_RS20795 () | 4646298..4646507 | + | 210 | WP_039320792.1 | TraR/DksA family transcriptional regulator | - |
| GT391_RS20800 () | 4646793..4647581 | + | 789 | WP_010287209.1 | hypothetical protein | - |
| GT391_RS20805 () | 4647967..4650153 | - | 2187 | WP_010287203.1 | AAA family ATPase | - |
| GT391_RS20810 () | 4650651..4650872 | + | 222 | WP_010287613.1 | hypothetical protein | - |
| GT391_RS20815 () | 4650941..4651606 | + | 666 | WP_010287612.1 | hypothetical protein | VF |
| GT391_RS20820 () | 4651603..4651884 | + | 282 | WP_010287611.1 | TrbC/VirB2 family protein | - |
| GT391_RS20825 () | 4651894..4654643 | + | 2750 | Protein_4062 | VirB3 family type IV secretion system protein | - |
| GT391_RS20830 () | 4654667..4655383 | + | 717 | WP_010287000.1 | type IV secretion system protein | - |
| GT391_RS20835 () | 4655394..4655618 | + | 225 | WP_010286998.1 | EexN family lipoprotein | - |
| GT391_RS20840 () | 4655630..4656670 | + | 1041 | WP_010286997.1 | type IV secretion system protein | - |
| GT391_RS21630 () | 4656758..4656898 | + | 141 | WP_010286996.1 | hypothetical protein | - |
| GT391_RS20845 () | 4656891..4657574 | + | 684 | WP_010286993.1 | hypothetical protein | VF |
| GT391_RS20850 () | 4657574..4658464 | + | 891 | WP_010286991.1 | P-type conjugative transfer protein VirB9 | - |
| GT391_RS20855 () | 4658461..4659684 | + | 1224 | WP_159398232.1 | hypothetical protein | VF |
| GT391_RS20860 () | 4659674..4660690 | + | 1017 | WP_159398233.1 | hypothetical protein | VF |
| GT391_RS20865 () | 4660734..4661036 | + | 303 | WP_010287717.1 | plasmid conjugation protein | - |
| GT391_RS20870 () | 4661763..4663625 | + | 1863 | WP_159398234.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GT391_RS20875 () | 4663634..4664380 | + | 747 | WP_039320867.1 | hypothetical protein | - |
| GT391_RS20880 () | 4664786..4665253 | + | 468 | WP_199559768.1 | Lrp/AsnC family transcriptional regulator | - |
| GT391_RS20885 () | 4665250..4666110 | - | 861 | WP_010287540.1 | EamA family transporter | - |
| GT391_RS20890 () | 4666296..4666550 | + | 255 | WP_039320862.1 | hypothetical protein | - |
| GT391_RS20895 () | 4666584..4666898 | - | 315 | WP_010287537.1 | CcdB family protein | Toxin Detail |
| GT391_RS20900 () | 4666901..4667137 | - | 237 | WP_010287535.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| GT391_RS20905 () | 4667457..4668401 | - | 945 | WP_159398235.1 | DUF1738 domain-containing protein | - |
| GT391_RS20910 () | 4668787..4669509 | + | 723 | WP_072014229.1 | MurR/RpiR family transcriptional regulator | - |
| GT391_RS20915 () | 4669687..4671114 | + | 1428 | WP_010284508.1 | glycoside hydrolase family 1 protein | - |
| GT391_RS20920 () | 4671159..4672520 | + | 1362 | WP_010284507.1 | PTS transporter subunit EIIC | - |
| GT391_RS20925 () | 4673144..4673710 | + | 567 | WP_052051620.1 | TetR family transcriptional regulator | - |
| GT391_RS20930 () | 4673791..4674987 | + | 1197 | WP_039320401.1 | MFS transporter | - |
| GT391_RS20935 () | 4675222..4676211 | - | 990 | Protein_4085 | IS630 family transposase IS630 | Transposase |
| GT391_RS21665 () | 4676499..4676630 | + | 132 | Protein_4086 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GT391_RS21670 () | 4676610..4676983 | + | 374 | Protein_4087 | helix-turn-helix transcriptional regulator | - |
| GT391_RS20950 () | 4677017..4677904 | + | 888 | WP_039320398.1 | L,D-transpeptidase family protein | - |
| GT391_RS20955 () | 4678210..4679229 | - | 1020 | WP_010284496.1 | esterase family protein | - |
| GT391_RS20960 () | 4679544..4680694 | + | 1151 | WP_085996947.1 | IS3 family transposase ISEal1 | Transposase |
| GT391_RS20970 () | 4681532..4682491 | - | 960 | WP_010284481.1 | DUF523 and DUF1722 domain-containing protein | - |
| GT391_RS20975 () | 4682505..4683032 | - | 528 | WP_010284469.1 | DUF3833 domain-containing protein | - |
| GT391_RS20980 () | 4683029..4683556 | - | 528 | WP_010284468.1 | hypothetical protein | - |
| GT391_RS20985 () | 4683553..4684038 | - | 486 | WP_010284465.1 | DUF2878 domain-containing protein | - |
| GT391_RS20990 () | 4684035..4685255 | - | 1221 | WP_010284461.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| GT391_RS20995 () | 4685252..4685974 | - | 723 | WP_010284459.1 | DUF1365 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|