MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 42438 bp
Accession: NZ_CP047495 Location: 3364509..3406946 Organism: Pectobacterium brasiliense strain 1692 Replicon: chromosome
Accession: NZ_CP047495 Location: 3364509..3406946 Organism: Pectobacterium brasiliense strain 1692 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT391_RS15005 () | 3361616..3362815 | + | 1200 | WP_010277946.1 | multidrug effflux MFS transporter | - |
| GT391_RS15010 () | 3362965..3364137 | - | 1173 | WP_039320043.1 | prolyl oligopeptidase family serine peptidase | - |
| GT391_RS15015 () | 3365028..3365966 | + | 939 | WP_072014218.1 | DUF4007 family protein | - |
| GT391_RS15020 () | 3365956..3369279 | + | 3324 | WP_039320046.1 | ATP-binding protein | - |
| GT391_RS15025 () | 3369280..3370122 | + | 843 | WP_010277935.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| GT391_RS15030 () | 3370176..3372176 | - | 2001 | WP_010277932.1 | hypothetical protein | - |
| GT391_RS15035 () | 3372173..3374533 | - | 2361 | WP_010277930.1 | sensor histidine kinase | - |
| GT391_RS15040 () | 3375496..3376440 | + | 945 | WP_159398225.1 | DUF1738 domain-containing protein | - |
| GT391_RS15045 () | 3376761..3376997 | + | 237 | WP_010287128.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| GT391_RS15050 () | 3377000..3377314 | + | 315 | WP_010287131.1 | CcdB family protein | Toxin Detail |
| GT391_RS15055 () | 3377671..3378672 | - | 1002 | WP_010287133.1 | hypothetical protein | - |
| GT391_RS15060 () | 3379018..3379557 | - | 540 | WP_010287135.1 | hypothetical protein | - |
| GT391_RS15065 () | 3379797..3380564 | - | 768 | WP_010287139.1 | nucleotidyltransferase domain-containing protein | - |
| GT391_RS15070 () | 3380699..3381445 | - | 747 | WP_010287890.1 | hypothetical protein | - |
| GT391_RS15075 () | 3381454..3383316 | - | 1863 | WP_159398226.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GT391_RS15080 () | 3384042..3384344 | - | 303 | WP_010287717.1 | plasmid conjugation protein | - |
| GT391_RS15085 () | 3384388..3385404 | - | 1017 | WP_159398227.1 | hypothetical protein | VF |
| GT391_RS15090 () | 3385394..3386619 | - | 1226 | Protein_2927 | hypothetical protein | VF |
| GT391_RS15095 () | 3386616..3387506 | - | 891 | WP_010286991.1 | P-type conjugative transfer protein VirB9 | - |
| GT391_RS15100 () | 3387506..3388190 | - | 685 | Protein_2929 | hypothetical protein | VF |
| GT391_RS21605 () | 3388183..3388323 | - | 141 | WP_010286996.1 | hypothetical protein | - |
| GT391_RS15105 () | 3388411..3389452 | - | 1042 | Protein_2931 | type IV secretion system protein | - |
| GT391_RS15110 () | 3389464..3389688 | - | 225 | WP_010286998.1 | EexN family lipoprotein | - |
| GT391_RS15115 () | 3389699..3390418 | - | 720 | Protein_2933 | type IV secretion system protein | - |
| GT391_RS15120 () | 3390442..3393189 | - | 2748 | WP_159398228.1 | hypothetical protein | VF |
| GT391_RS15125 () | 3393199..3393480 | - | 282 | WP_010287596.1 | TrbC/VirB2 family protein | - |
| GT391_RS15130 () | 3393477..3394142 | - | 666 | WP_010287598.1 | hypothetical protein | VF |
| GT391_RS15135 () | 3394222..3394443 | - | 222 | WP_010287603.1 | hypothetical protein | - |
| GT391_RS15140 () | 3394928..3399955 | + | 5028 | WP_010286975.1 | caspase family protein | - |
| GT391_RS15145 () | 3400347..3401432 | + | 1086 | WP_010286976.1 | hypothetical protein | - |
| GT391_RS15150 () | 3401654..3401863 | - | 210 | WP_039320771.1 | TraR/DksA family transcriptional regulator | - |
| GT391_RS15155 () | 3401853..3402437 | - | 585 | WP_094431318.1 | DUF2857 domain-containing protein | - |
| GT391_RS15160 () | 3402454..3402648 | - | 195 | WP_039320955.1 | AlpA family transcriptional regulator | - |
| GT391_RS15165 () | 3402801..3403715 | - | 915 | WP_159398229.1 | hypothetical protein | - |
| GT391_RS15170 () | 3404130..3404402 | - | 273 | WP_010287774.1 | helix-turn-helix domain-containing protein | - |
| GT391_RS15175 () | 3404549..3404863 | + | 315 | WP_039320636.1 | helix-turn-helix domain-containing protein | - |
| GT391_RS15180 () | 3405048..3405362 | + | 315 | WP_025918867.1 | helix-turn-helix domain-containing protein | - |
| GT391_RS15185 () | 3405498..3406769 | - | 1272 | WP_039320638.1 | hypothetical protein ; Integrase | Integrase |
| GT391_RS15195 () | 3407117..3407914 | - | 798 | WP_010280851.1 | DgsA anti-repressor MtfA | - |
| GT391_RS15205 () | 3408154..3408540 | - | 387 | WP_010280853.1 | lysozyme inhibitor LprI family protein | - |
| GT391_RS15210 () | 3408695..3408862 | + | 168 | WP_010280855.1 | YqaE/Pmp3 family membrane protein | - |
| GT391_RS15215 () | 3408949..3410421 | - | 1473 | WP_010280859.1 | sensor domain-containing diguanylate cyclase | - |
| GT391_RS15220 () | 3410697..3411605 | + | 909 | WP_039316060.1 | lipid kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|