MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 144462 bp
Accession: NZ_CP047461 Location: 2125533..2269994 Organism: Escherichia coli strain ZF34 Replicon: chromosome
Accession: NZ_CP047461 Location: 2125533..2269994 Organism: Escherichia coli strain ZF34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTK64_RS10245 () | 2122497..2123204 | + | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| GTK64_RS10255 () | 2123563..2124780 | + | 1218 | WP_137565924.1 | tyrosine-type recombinase/integrase | - |
| GTK64_RS10260 () | 2124900..2125184 | + | 285 | WP_008913927.1 | hypothetical protein | - |
| GTK64_RS10265 () | 2125510..2125707 | + | 198 | Protein_1999 | antirestriction protein ArdA | - |
| GTK64_RS10270 () | 2125709..2126470 | - | 762 | Protein_2000 | DUF4153 domain-containing protein | - |
| GTK64_RS10275 () | 2126460..2126990 | - | 531 | WP_164538491.1 | 4-alpha-glucanotransferase | - |
| GTK64_RS10280 () | 2127000..2129393 | - | 2394 | WP_000081909.1 | maltodextrin phosphorylase | - |
| GTK64_RS10285 () | 2129471..2130487 | + | 1017 | WP_001407551.1 | IS5 family transposase IS5D | Transposase |
| GTK64_RS10290 () | 2130645..2131820 | - | 1176 | Protein_2004 | TraI domain-containing protein | - |
| GTK64_RS10295 () | 2131911..2135954 | - | 4044 | WP_152931452.1 | DUF2357 domain-containing protein | - |
| GTK64_RS10300 () | 2135958..2138663 | - | 2706 | WP_152931451.1 | chromosome partitioning protein ParA | - |
| GTK64_RS10305 () | 2138663..2140834 | - | 2172 | WP_161997713.1 | hypothetical protein | - |
| GTK64_RS10310 () | 2140831..2144268 | - | 3438 | WP_152931450.1 | AAA family ATPase | - |
| GTK64_RS10315 () | 2144265..2145758 | - | 1494 | WP_152931449.1 | lipopolysaccharide kinase | - |
| GTK64_RS10320 () | 2145755..2146483 | - | 729 | WP_152931448.1 | protein phosphatase 2C domain-containing protein | - |
| GTK64_RS10325 () | 2146476..2147057 | - | 582 | WP_152931447.1 | VWA domain-containing protein | - |
| GTK64_RS10330 () | 2147059..2148789 | - | 1731 | WP_152931446.1 | DUF1887 family protein | - |
| GTK64_RS10335 () | 2148786..2150933 | - | 2148 | WP_152931445.1 | AAA family ATPase | - |
| GTK64_RS10340 () | 2150936..2152507 | - | 1572 | WP_152931444.1 | hypothetical protein | - |
| GTK64_RS10350 () | 2153874..2154560 | - | 687 | WP_152931510.1 | VWA domain-containing protein | - |
| GTK64_RS23230 () | 2154706..2154888 | - | 183 | WP_196606233.1 | hypothetical protein | - |
| GTK64_RS10360 () | 2155091..2156107 | - | 1017 | WP_164538492.1 | IS5 family transposase IS5D | Transposase |
| GTK64_RS10365 () | 2156117..2156296 | - | 180 | WP_152931417.1 | hypothetical protein | - |
| GTK64_RS10370 () | 2156340..2158394 | - | 2055 | WP_196606227.1 | protease Lon-related BREX system protein BrxL | - |
| GTK64_RS10375 () | 2158593..2161262 | - | 2670 | WP_136516627.1 | BREX-1 system phosphatase PglZ type A | - |
| GTK64_RS10380 () | 2161262..2164963 | - | 3702 | WP_136516626.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| GTK64_RS10385 () | 2164979..2166742 | - | 1764 | WP_111805007.1 | DUF262 domain-containing protein | - |
| GTK64_RS10390 () | 2166819..2170496 | - | 3678 | WP_136516625.1 | BREX system P-loop protein BrxC | - |
| GTK64_RS10395 () | 2170515..2171099 | - | 585 | WP_004249341.1 | DUF1788 domain-containing protein | - |
| GTK64_RS10400 () | 2171096..2171695 | - | 600 | WP_049194747.1 | DUF1819 family protein | - |
| GTK64_RS10405 () | 2171705..2172631 | - | 927 | WP_152931420.1 | WYL domain-containing protein | - |
| GTK64_RS10410 () | 2172896..2173321 | - | 426 | WP_152931421.1 | hypothetical protein | - |
| GTK64_RS10415 () | 2173572..2173811 | - | 240 | WP_152931422.1 | AlpA family transcriptional regulator | - |
| GTK64_RS10420 () | 2173908..2174441 | - | 534 | WP_152931423.1 | hypothetical protein | - |
| GTK64_RS10425 () | 2174463..2174678 | + | 216 | WP_080025647.1 | hypothetical protein | - |
| GTK64_RS10430 () | 2175070..2175767 | - | 698 | Protein_2032 | IS1 family transposase IS1G | Transposase |
| GTK64_RS10435 () | 2175823..2176074 | + | 252 | Protein_2033 | IS200/IS605 family transposase | - |
| GTK64_RS10440 () | 2176266..2176460 | - | 195 | WP_053273080.1 | hypothetical protein | - |
| GTK64_RS10445 () | 2176762..2177459 | - | 698 | Protein_2035 | IS1 family transposase IS1G | Transposase |
| GTK64_RS10450 () | 2177515..2179266 | + | 1752 | Protein_2036 | hypothetical protein | VF |
| GTK64_RS10455 () | 2179288..2180037 | + | 750 | WP_001352149.1 | hypothetical protein | VF |
| GTK64_RS10460 () | 2180039..2181103 | + | 1065 | WP_001269817.1 | fimbrial protein | - |
| GTK64_RS10465 () | 2181146..2181346 | - | 201 | WP_046788569.1 | cell surface composition regulator GlgS | - |
| GTK64_RS10470 () | 2181615..2182208 | + | 594 | WP_000599943.1 | DUF1449 family protein | - |
| GTK64_RS10475 () | 2182242..2182939 | + | 698 | Protein_2041 | IS1 family transposase IS1G | Transposase |
| GTK64_RS10480 () | 2182949..2183743 | + | 795 | Protein_2042 | Lipid A biosynthesis myristoyltransferase | VF |
| GTK64_RS10485 () | 2183799..2184496 | + | 698 | Protein_2043 | IS1 family transposase | - |
| GTK64_RS10495 () | 2184773..2184904 | - | 132 | Protein_2044 | IS3 family transposase | - |
| GTK64_RS10500 () | 2185185..2186543 | + | 1359 | WP_164538493.1 | esterase-like activity of phytase family protein | - |
| GTK64_RS10505 () | 2186782..2187918 | - | 1137 | Protein_2046 | IS66 family transposase ISEc8 | Transposase |
| GTK64_RS10510 () | 2187923..2188669 | + | 747 | Protein_2047 | AIDA repeat-containing protein | - |
| GTK64_RS10515 () | 2188669..2189841 | - | 1173 | Protein_2048 | hypothetical protein | VF |
| GTK64_RS10520 () | 2190326..2192008 | - | 1683 | WP_000259302.1 | glycolate permease GlcA | - |
| GTK64_RS10525 () | 2192363..2194534 | - | 2172 | WP_000084131.1 | malate synthase G | - |
| GTK64_RS10530 () | 2194556..2194960 | - | 405 | WP_000853256.1 | protein GlcG | - |
| GTK64_RS10535 () | 2194965..2196188 | - | 1224 | WP_001194661.1 | glycolate oxidase subunit GlcF | - |
| GTK64_RS10540 () | 2196199..2197251 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| GTK64_RS10545 () | 2197251..2198750 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| GTK64_RS10550 () | 2199001..2199765 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| GTK64_RS10555 () | 2199772..2200914 | - | 1143 | WP_001300526.1 | DNA-binding protein | - |
| GTK64_RS10560 () | 2201291..2203012 | + | 1722 | WP_001373528.1 | 2-succinylbenzoate--CoA ligase | VF |
| GTK64_RS10565 () | 2203009..2203923 | + | 915 | WP_001077167.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GTK64_RS10570 () | 2203955..2204203 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| GTK64_RS10575 () | 2204203..2205375 | + | 1173 | WP_000524970.1 | 8-amino-7-oxononanoate synthase | VF |
| GTK64_RS10580 () | 2205410..2206489 | - | 1080 | WP_001318997.1 | LPS export ABC transporter permease LptG | - |
| GTK64_RS10585 () | 2206486..2207556 | - | 1071 | WP_000779636.1 | LPS export ABC transporter permease LptF | - |
| GTK64_RS10590 () | 2207587..2208147 | - | 561 | WP_164538494.1 | YtfJ family protein | - |
| GTK64_RS10595 () | 2208159..2208983 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| GTK64_RS10600 () | 2208983..2210332 | - | 1350 | WP_000896885.1 | lipopolysaccharide biosynthesis protein | - |
| GTK64_RS10605 () | 2210378..2211136 | - | 759 | WP_000339531.1 | ATP-binding protein | - |
| GTK64_RS10610 () | 2211168..2211881 | - | 714 | WP_001076243.1 | thymidylate kinase | - |
| GTK64_RS10615 () | 2212055..2212747 | + | 693 | WP_001190781.1 | thymidylate kinase | - |
| GTK64_RS10620 () | 2212796..2213855 | - | 1060 | Protein_2069 | anion permease | - |
| GTK64_RS10625 () | 2214147..2216006 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| GTK64_RS10630 () | 2216211..2217077 | + | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| GTK64_RS10635 () | 2217200..2217448 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| GTK64_RS10640 () | 2217461..2217802 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| GTK64_RS10645 () | 2217795..2218283 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| GTK64_RS10650 () | 2218276..2218770 | - | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| GTK64_RS10655 () | 2218770..2220473 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| GTK64_RS10660 () | 2220470..2221648 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| GTK64_RS10665 () | 2221638..2222624 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| GTK64_RS10670 () | 2222627..2223745 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| GTK64_RS10675 () | 2223934..2224221 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| GTK64_RS10680 () | 2224340..2225225 | - | 886 | Protein_2081 | dienelactone hydrolase family protein | - |
| GTK64_RS10685 () | 2225382..2226422 | + | 1041 | WP_000262172.1 | L-glyceraldehyde 3-phosphate reductase | - |
| GTK64_RS10690 () | 2226462..2226956 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| GTK64_RS10695 () | 2227147..2228031 | + | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| GTK64_RS10700 () | 2228303..2228728 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| GTK64_RS10705 () | 2228735..2229469 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| GTK64_RS10710 () | 2229721..2230908 | + | 1188 | WP_000763931.1 | cystathionine beta-lyase | - |
| GTK64_RS10715 () | 2231048..2231707 | + | 660 | WP_000268419.1 | DedA family protein | - |
| GTK64_RS10720 () | 2231747..2232646 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| GTK64_RS10725 () | 2232840..2234003 | + | 1164 | WP_001058802.1 | alcohol dehydrogenase | - |
| GTK64_RS10730 () | 2234108..2234935 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| GTK64_RS10735 () | 2235135..2236061 | + | 927 | WP_000691619.1 | YbjP/YqhG family protein | - |
| GTK64_RS10740 () | 2236112..2236369 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| GTK64_RS10745 () | 2236412..2238631 | - | 2220 | WP_164538495.1 | YgiQ family radical SAM protein | - |
| GTK64_RS10750 () | 2238742..2240154 | - | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| GTK64_RS10755 () | 2240229..2240966 | - | 738 | WP_000965722.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| GTK64_RS10760 () | 2241200..2243458 | - | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| GTK64_RS10765 () | 2243596..2245172 | - | 1577 | Protein_2098 | ABC transporter substrate-binding protein | - |
| GTK64_RS10770 () | 2245305..2245700 | - | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| GTK64_RS10775 () | 2245702..2245998 | - | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| GTK64_RS10780 () | 2246203..2246685 | - | 483 | WP_000183505.1 | transcriptional regulator | - |
| GTK64_RS10785 () | 2246738..2247130 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| GTK64_RS10790 () | 2247282..2247941 | + | 660 | WP_001221493.1 | Regulator of RpoS | VF |
| GTK64_RS10795 () | 2247938..2249287 | + | 1350 | WP_000673402.1 | two-component system sensor histidine kinase QseC | - |
| GTK64_RS10800 () | 2249333..2249665 | - | 333 | WP_000917684.1 | DUF2645 family protein | - |
| GTK64_RS10805 () | 2249984..2250565 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| GTK64_RS10810 () | 2250596..2250910 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| GTK64_RS10815 () | 2250958..2252850 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| GTK64_RS10820 () | 2252879..2253460 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| GTK64_RS10825 () | 2253460..2254287 | - | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| GTK64_RS10830 () | 2254312..2254734 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| GTK64_RS10835 () | 2254735..2255364 | - | 630 | WP_164538496.1 | ADP-ribose diphosphatase | - |
| GTK64_RS10840 () | 2255569..2257050 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| GTK64_RS10845 () | 2257198..2257869 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| GTK64_RS10850 () | 2257875..2259035 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| GTK64_RS10855 () | 2259073..2259861 | - | 789 | WP_001320780.1 | 4,5-DOPA dioxygenase extradiol | - |
| GTK64_RS10860 () | 2260004..2260777 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| GTK64_RS10865 () | 2260835..2261005 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| GTK64_RS10870 () | 2261267..2261920 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| GTK64_RS10875 () | 2262294..2262584 | + | 291 | WP_001295626.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| GTK64_RS10880 () | 2262868..2263419 | + | 552 | WP_001272145.1 | hypothetical protein | VF |
| GTK64_RS10885 () | 2263573..2264270 | - | 698 | Protein_2122 | IS1 family transposase | - |
| GTK64_RS10890 () | 2264326..2264481 | + | 156 | Protein_2123 | DUF1449 family protein | - |
| GTK64_RS10895 () | 2264508..2265248 | + | 741 | WP_021570949.1 | flotillin family protein | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_0 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_0 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_0 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_0 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_6 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_6 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_6 | - | - |
| - () | 2265543..2265685 | - | 143 | NuclAT_6 | - | - |
| GTK64_RS10900 () | 2265586..2265645 | + | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 2265919..2266060 | - | 142 | NuclAT_5 | - | - |
| - () | 2265919..2266060 | - | 142 | NuclAT_5 | - | - |
| - () | 2265919..2266060 | - | 142 | NuclAT_5 | - | - |
| - () | 2265919..2266060 | - | 142 | NuclAT_5 | - | - |
| GTK64_RS10905 () | 2265961..2266020 | + | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| GTK64_RS10910 () | 2266140..2267573 | - | 1434 | WP_000869178.1 | Bifunctional protein HldE | VF |
| GTK64_RS10915 () | 2267621..2270461 | - | 2841 | WP_001301081.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| GTK64_RS10920 () | 2270484..2271785 | - | 1302 | WP_021570950.1 | inorganic triphosphatase | - |
| GTK64_RS10925 () | 2272027..2272647 | + | 621 | WP_001125331.1 | SH3 domain-containing protein | - |
| GTK64_RS10930 () | 2272711..2273949 | + | 1239 | WP_000708487.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| GTK64_RS10935 () | 2274130..2274951 | - | 822 | WP_001405697.1 | undecaprenyl-diphosphate phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|