MGE detailed information
MGE type: Conjugative plasmid MGE length: 149553 bp
Accession: NZ_CP047421 Location: 1..149553 Organism: Shewanella algae strain 18064-CSB-B-B Replicon: plasmid p18064-65-CSB-B-B
Accession: NZ_CP047421 Location: 1..149553 Organism: Shewanella algae strain 18064-CSB-B-B Replicon: plasmid p18064-65-CSB-B-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GM320_RS00005 () | 1..2973 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| GM320_RS00010 () | 2970..4835 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| GM320_RS00015 () | 4846..5430 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| GM320_RS00020 () | 5387..6016 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| GM320_RS00025 () | 6026..6472 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| GM320_RS00030 () | 6482..6859 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| GM320_RS00035 () | 6859..7521 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| GM320_RS00040 () | 7845..8222 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| GM320_RS00045 () | 8367..8648 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| GM320_RS00050 () | 8645..9271 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| GM320_RS00055 () | 9255..10172 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| GM320_RS00060 () | 10172..11485 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| GM320_RS00065 () | 11482..12060 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GM320_RS00070 () | 12064..12456 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| GM320_RS00075 () | 12657..18143 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| GM320_RS00080 () | 18292..18999 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| GM320_RS00085 () | 18996..21443 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| GM320_RS00090 () | 21458..21775 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| GM320_RS00095 () | 21772..22302 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| GM320_RS00100 () | 22265..23530 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| GM320_RS00105 () | 23527..24198 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| GM320_RS00110 () | 24195..25202 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| GM320_RS00115 () | 25306..28113 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| GM320_RS00120 () | 28152..29012 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| GM320_RS00125 () | 29135..29776 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| GM320_RS00130 () | 30071..30391 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| GM320_RS00135 () | 30695..30880 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| GM320_RS00140 () | 31100..32068 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| GM320_RS00145 () | 32079..32987 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| GM320_RS00150 () | 33048..33578 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| GM320_RS00155 () | 33673..34662 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| GM320_RS00160 () | 34725..35735 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| GM320_RS00165 () | 35935..37212 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| GM320_RS00170 () | 37297..39093 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| GM320_RS00175 () | 39155..39490 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| GM320_RS00180 () | 39755..40294 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| GM320_RS00185 () | 40385..40885 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| GM320_RS00190 () | 40959..41843 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| GM320_RS00195 () | 41909..42133 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| GM320_RS00200 () | 42195..42584 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| GM320_RS00205 () | 42574..43026 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| GM320_RS00210 () | 43364..43555 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| GM320_RS00215 () | 43600..43977 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| GM320_RS00220 () | 44169..44513 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| GM320_RS00225 () | 44591..44893 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| GM320_RS00230 () | 44971..46596 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| GM320_RS00235 () | 46657..47088 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| GM320_RS00240 () | 47162..47716 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| GM320_RS00245 () | 47949..48335 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| GM320_RS00250 () | 48423..50876 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| GM320_RS00255 () | 51078..51281 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| GM320_RS00260 () | 51353..51958 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| GM320_RS00265 () | 51951..52220 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| GM320_RS00270 () | 52234..52452 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| GM320_RS00275 () | 52526..53083 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| GM320_RS00280 () | 53158..54009 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| GM320_RS00285 () | 54468..54854 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| GM320_RS00290 () | 55032..56759 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| GM320_RS22160 () | 56746..57024 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| GM320_RS00295 () | 57097..57318 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| GM320_RS00300 () | 57500..58504 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| GM320_RS00305 () | 58583..61555 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| GM320_RS00310 () | 61558..62115 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GM320_RS00315 () | 62421..63434 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GM320_RS00320 () | 63579..64076 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| GM320_RS00325 () | 64188..64478 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| GM320_RS00330 () | 64583..64930 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GM320_RS00335 () | 64924..65763 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GM320_RS00340 () | 66168..67709 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| GM320_RS00345 () | 67943..68782 | + | 840 | Protein_69 | IS5 family transposase ISEc35 | Transposase |
| GM320_RS00350 () | 69108..69881 | + | 774 | WP_000359986.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| GM320_RS00355 () | 69862..70143 | - | 282 | WP_077252464.1 | hypothetical protein | - |
| GM320_RS00360 () | 70363..70548 | - | 186 | WP_002026779.1 | hypothetical protein | - |
| GM320_RS00365 () | 70597..70878 | + | 282 | Protein_73 | IS4 family transposase ISEc29 | Transposase |
| GM320_RS00370 () | 70942..71646 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GM320_RS00375 () | 71699..73906 | + | 2208 | Protein_75 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GM320_RS00380 () | 73940..74029 | - | 90 | Protein_76 | mercuric transport protein | - |
| GM320_RS00385 () | 74101..74535 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| GM320_RS00390 () | 74614..75618 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| GM320_RS22165 () | 75895..76014 | + | 120 | Protein_79 | permease | - |
| GM320_RS22170 () | 76024..76140 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| GM320_RS00395 () | 76261..76635 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| GM320_RS00400 () | 76749..77474 | + | 726 | WP_159352265.1 | hypothetical protein | - |
| GM320_RS00405 () | 77607..81860 | + | 4254 | WP_001257735.1 | RHS repeat protein | - |
| GM320_RS00410 () | 81832..82272 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| GM320_RS00415 () | 82443..82895 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| GM320_RS00420 () | 82911..83513 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| GM320_RS00425 () | 83783..84064 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| GM320_RS00430 () | 84363..84899 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| GM320_RS00435 () | 84902..85912 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| GM320_RS00440 () | 85917..86786 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| GM320_RS00445 () | 86783..87274 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| GM320_RS00450 () | 87591..88466 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| GM320_RS00455 () | 88628..89668 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| GM320_RS00460 () | 89955..91466 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| GM320_RS00465 () | 91577..92617 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| GM320_RS00470 () | 92619..94052 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| GM320_RS00475 () | 94065..97679 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GM320_RS00480 () | 97717..98079 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| GM320_RS00485 () | 98795..99067 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| GM320_RS00490 () | 99067..99600 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| GM320_RS00495 () | 99611..100219 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| GM320_RS00500 () | 100216..100767 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| GM320_RS00505 () | 100827..101246 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| GM320_RS00510 () | 101248..101541 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| GM320_RS00515 () | 101558..102541 | - | 984 | WP_000077457.1 | ParM/StbA family protein | - |
| GM320_RS00520 () | 103040..103579 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| GM320_RS22175 () | 103584..103871 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| GM320_RS00525 () | 103856..104956 | + | 1101 | WP_001348532.1 | hypothetical protein | - |
| GM320_RS00530 () | 105993..106427 | - | 435 | WP_004201092.1 | hypothetical protein | - |
| GM320_RS00535 () | 106445..107560 | - | 1116 | WP_000946104.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| GM320_RS00540 () | 107828..108436 | + | 609 | WP_000849069.1 | hypothetical protein | - |
| GM320_RS00545 () | 108441..108962 | + | 522 | WP_000393783.1 | hypothetical protein | - |
| GM320_RS00550 () | 108965..109486 | + | 522 | WP_000648873.1 | hypothetical protein | - |
| GM320_RS00555 () | 109583..110056 | + | 474 | WP_000057876.1 | hypothetical protein | - |
| GM320_RS00560 () | 110067..110360 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| GM320_RS00565 () | 110365..111219 | + | 855 | WP_000539391.1 | hypothetical protein | - |
| GM320_RS00570 () | 111219..112178 | + | 960 | WP_000829617.1 | S49 family peptidase | - |
| GM320_RS00575 () | 112194..113054 | + | 861 | WP_000139696.1 | DsbA family protein | - |
| GM320_RS00580 () | 113088..113516 | + | 429 | WP_000591076.1 | hypothetical protein | - |
| GM320_RS00585 () | 113574..113933 | + | 360 | WP_000422769.1 | hypothetical protein | - |
| GM320_RS00590 () | 113933..114379 | + | 447 | WP_000919343.1 | hypothetical protein | - |
| GM320_RS00595 () | 114376..114894 | + | 519 | WP_000210757.1 | nitrite reductase | - |
| GM320_RS00600 () | 114894..115124 | + | 231 | WP_000972665.1 | hypothetical protein | - |
| GM320_RS00605 () | 115111..115968 | + | 858 | WP_001167036.1 | hypothetical protein | - |
| GM320_RS22180 () | 115880..116185 | + | 306 | WP_171820680.1 | hypothetical protein | - |
| GM320_RS00615 () | 116188..116715 | + | 528 | WP_001210659.1 | thermonuclease family protein | - |
| GM320_RS00620 () | 116773..117045 | + | 273 | WP_001043046.1 | HU family DNA-binding protein | - |
| GM320_RS00625 () | 117134..117427 | + | 294 | WP_001239998.1 | hypothetical protein | - |
| GM320_RS00630 () | 117454..117756 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| GM320_RS00635 () | 117761..118111 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GM320_RS00640 () | 118274..118822 | + | 549 | WP_001061573.1 | hypothetical protein | - |
| GM320_RS00645 () | 119163..119357 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| GM320_RS22185 () | 119368..119739 | + | 372 | Protein_133 | hypothetical protein | - |
| GM320_RS00650 () | 119732..120202 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| GM320_RS00655 () | 120217..120552 | - | 336 | WP_000683477.1 | hypothetical protein | - |
| GM320_RS00660 () | 120649..121137 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| GM320_RS00665 () | 121140..121637 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| GM320_RS00670 () | 122199..123131 | + | 933 | WP_000434070.1 | hypothetical protein | - |
| GM320_RS00675 () | 123205..124668 | + | 1464 | WP_001280522.1 | AAA family ATPase | - |
| GM320_RS00680 () | 124730..125122 | + | 393 | WP_000018404.1 | hypothetical protein | - |
| GM320_RS00685 () | 125277..125609 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| GM320_RS00690 () | 125656..126531 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| GM320_RS00695 () | 126787..128049 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| GM320_RS00700 () | 128414..129598 | + | 1185 | WP_000245300.1 | hypothetical protein | - |
| GM320_RS00705 () | 129610..129957 | + | 348 | WP_000039129.1 | hypothetical protein | - |
| GM320_RS00710 () | 129954..130382 | + | 429 | WP_000988988.1 | hypothetical protein | - |
| GM320_RS00715 () | 130375..130938 | + | 564 | WP_000004671.1 | hypothetical protein | - |
| GM320_RS00720 () | 130950..131519 | + | 570 | WP_001256126.1 | hypothetical protein | - |
| GM320_RS00725 () | 131522..132067 | + | 546 | WP_000435225.1 | hypothetical protein | - |
| GM320_RS00730 () | 132184..133122 | + | 939 | WP_000268394.1 | chromosome partitioning protein ParB | - |
| GM320_RS00735 () | 133122..133319 | + | 198 | WP_000532167.1 | hypothetical protein | - |
| GM320_RS00740 () | 133557..133799 | + | 243 | WP_001096360.1 | hypothetical protein | - |
| GM320_RS00745 () | 133802..134164 | + | 363 | WP_001258026.1 | hypothetical protein | - |
| GM320_RS00750 () | 134157..135401 | + | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| GM320_RS00755 () | 135415..135864 | + | 450 | WP_001053910.1 | hypothetical protein | - |
| GM320_RS00760 () | 135846..136157 | + | 312 | WP_000380893.1 | hypothetical protein | - |
| GM320_RS00765 () | 136331..137116 | + | 786 | WP_001151305.1 | Sporulation initiation inhibitor protein Soj | VF |
| GM320_RS00770 () | 137120..138301 | + | 1182 | WP_159352266.1 | ParB/RepB/Spo0J family partition protein | - |
| GM320_RS00775 () | 138350..138622 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| GM320_RS00780 () | 138675..139310 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| GM320_RS00785 () | 139402..139545 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| GM320_RS00790 () | 139872..140249 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| GM320_RS00795 () | 140242..140523 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| GM320_RS00800 () | 140498..141172 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| GM320_RS00805 () | 141240..141671 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| GM320_RS00810 () | 141677..141988 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| GM320_RS00815 () | 141997..142497 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| GM320_RS00820 () | 142501..143928 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| GM320_RS00825 () | 143928..144584 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| GM320_RS00830 () | 144640..145257 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| GM320_RS00835 () | 145469..145768 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| GM320_RS00840 () | 145859..146347 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| GM320_RS00845 () | 146362..148554 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| GM320_RS00850 () | 148554..148787 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| GM320_RS00855 () | 148769..149386 | - | 618 | WP_001249395.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|