MGE detailed information
MGE type: IScluster/Tn MGE length: 27576 bp
Accession: NZ_CP047380 Location: 67310..94885 Organism: Escherichia coli strain CAU16175 Replicon: plasmid pCAU16175_2
Accession: NZ_CP047380 Location: 67310..94885 Organism: Escherichia coli strain CAU16175 Replicon: plasmid pCAU16175_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS29855 () | 62373..63251 | + | 879 | Protein_60 | secretion protein EspG | - |
| GTP13_RS29860 () | 63844..65151 | + | 1308 | WP_161954550.1 | ferric reductase-like transmembrane domain-containing protein | - |
| GTP13_RS29865 () | 65640..66221 | + | 582 | WP_096317730.1 | secretion protein EspT | - |
| GTP13_RS29870 () | 66413..66736 | + | 324 | WP_096317729.1 | hypothetical protein | - |
| GTP13_RS29875 () | 66872..67201 | - | 330 | WP_106485644.1 | hypothetical protein | - |
| GTP13_RS29880 () | 67310..68290 | + | 981 | WP_032216024.1 | IS5 family transposase ISKpn26 | Transposase |
| GTP13_RS29895 () | 69886..70410 | - | 525 | Protein_67 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| GTP13_RS31200 () | 70581..70772 | + | 192 | Protein_68 | IS91 family transposase | - |
| GTP13_RS31205 () | 70740..70955 | - | 216 | Protein_69 | helix-turn-helix transcriptional regulator | - |
| GTP13_RS29905 () | 71051..71308 | + | 258 | Protein_70 | IS3 family transposase IS911 | Transposase |
| GTP13_RS29910 () | 71376..72143 | + | 768 | Protein_71 | IS30 family transposase IS30D | Transposase |
| GTP13_RS29915 () | 72202..72896 | + | 695 | WP_085949012.1 | IS1 family transposase | - |
| GTP13_RS29920 () | 72915..73406 | - | 492 | Protein_73 | hypothetical protein | - |
| GTP13_RS29925 () | 73653..73811 | + | 159 | WP_001632354.1 | hypothetical protein | - |
| GTP13_RS29930 () | 73829..74176 | - | 348 | WP_064560668.1 | hypothetical protein | - |
| GTP13_RS29935 () | 74472..74954 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| GTP13_RS29940 () | 75071..75274 | - | 204 | WP_096245924.1 | hypothetical protein | - |
| GTP13_RS29945 () | 75280..75762 | - | 483 | Protein_78 | 3'-5' exonuclease | - |
| GTP13_RS29950 () | 75923..76147 | - | 225 | WP_050439874.1 | hypothetical protein | - |
| GTP13_RS29955 () | 76399..76728 | + | 330 | WP_001541974.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTP13_RS29960 () | 76709..76990 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| GTP13_RS29965 () | 77005..77331 | + | 327 | Protein_82 | DNA-binding protein | - |
| GTP13_RS29970 () | 77412..77486 | + | 75 | Protein_83 | CPBP family intramembrane metalloprotease | - |
| GTP13_RS29975 () | 77621..77815 | + | 195 | Protein_84 | IS66 family transposase ISEc23 | Transposase |
| GTP13_RS29985 () | 79220..79609 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| GTP13_RS29990 () | 79653..81860 | - | 2208 | WP_167583029.1 | Catalase-peroxidase | VF |
| GTP13_RS30000 () | 83366..87457 | + | 4092 | WP_064560619.1 | Serine protease SepA autotransporter | VF |
| GTP13_RS30005 () | 87660..88354 | + | 695 | WP_085949012.1 | IS1 family transposase | - |
| GTP13_RS30010 () | 88489..88770 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GTP13_RS30015 () | 88767..89036 | - | 270 | WP_044720349.1 | hypothetical protein | Antitoxin Detail |
| GTP13_RS30020 () | 89539..90162 | + | 624 | WP_077150956.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| GTP13_RS30025 () | 90143..93109 | + | 2967 | WP_072024409.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| GTP13_RS30030 () | 93135..93359 | + | 225 | Protein_95 | transposase | - |
| GTP13_RS30035 () | 93573..93761 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| GTP13_RS30040 () | 93771..94885 | + | 1115 | Protein_97 | IS91 family transposase ISSbo1 | Transposase |
| GTP13_RS30045 () | 95000..95203 | - | 204 | WP_096317774.1 | hypothetical protein | - |
| GTP13_RS30050 () | 95261..95416 | - | 156 | WP_161954553.1 | hypothetical protein | - |
| GTP13_RS30055 () | 96117..96945 | - | 829 | Protein_100 | incFII family plasmid replication initiator RepA | - |
| GTP13_RS30060 () | 96938..97012 | - | 75 | WP_096246030.1 | RepA leader peptide Tap | - |
| GTP13_RS30065 () | 97249..97503 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| GTP13_RS30070 () | 97743..98333 | - | 591 | WP_000766812.1 | DUF2726 domain-containing protein | - |
| GTP13_RS30075 () | 98371..98580 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| GTP13_RS30080 () | 98626..99087 | - | 462 | WP_064559535.1 | thermonuclease family protein | - |
| GTP13_RS30085 () | 99332..99544 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|