NZ_CP0473791..190219

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 190219 bp
Accession: NZ_CP047379        Location: 1..190219         Organism: Escherichia coli strain CAU16175       Replicon: plasmid pCAU16175_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GTP13_RS28515 () 1..876 + 876 WP_000594612.1 RepB family plasmid replication initiator protein -
GTP13_RS28520 () 2025..2378 + 354 WP_000423602.1 hypothetical protein -
GTP13_RS28525 () 2584..3696 - 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
GTP13_RS28530 () 3779..4096 + 318 WP_000043357.1 hypothetical protein -
GTP13_RS28535 () 4108..4896 + 789 WP_000783153.1 pilus assembly protein -
GTP13_RS28540 () 4896..6167 + 1272 WP_000592090.1 type-F conjugative transfer system secretin TraK -
GTP13_RS28545 () 6169..6630 + 462 WP_000521240.1 hypothetical protein -
GTP13_RS28550 () 6620..7975 + 1356 WP_000351841.1 IncHI-type conjugal transfer protein TrhB -
GTP13_RS28555 () 8043..8465 + 423 WP_000251250.1 hypothetical protein -
GTP13_RS28560 () 8584..9336 + 753 WP_183079335.1 protein-disulfide isomerase HtdT -
GTP13_RS28565 () 9346..10296 + 951 WP_001022587.1 IncHI-type conjugal transfer lipoprotein TrhV -
GTP13_RS28570 () 10305..12986 + 2682 WP_000387412.1 TraC family protein -
GTP13_RS28575 () 16823..18076 + 1254 WP_032084678.1 Plasmid partition protein A VF
GTP13_RS28580 () 18073..19077 + 1005 WP_032192066.1 ParB N-terminal domain-containing protein -
GTP13_RS28585 () 19139..19528 - 390 WP_001572421.1 hypothetical protein -
GTP13_RS28590 () 19525..20046 - 522 WP_000598516.1 hypothetical protein -
GTP13_RS28595 () 20039..20875 - 837 WP_042634275.1 hypothetical protein -
GTP13_RS28600 () 20872..21819 - 948 WP_046788422.1 metallophosphoesterase -
GTP13_RS28605 () 22183..23220 + 1038 WP_000818955.1 hypothetical protein -
GTP13_RS28610 () 23232..23870 + 639 WP_001107537.1 hypothetical protein -
GTP13_RS28615 () 24274..24726 + 453 WP_000952689.1 hypothetical protein -
GTP13_RS28620 () 24716..25141 + 426 WP_000836980.1 hypothetical protein -
GTP13_RS28625 () 25150..25704 + 555 WP_000235777.1 hypothetical protein -
GTP13_RS28630 () 25824..30128 + 4305 WP_001232107.1 IncHI-type conjugal transfer protein RSP -
GTP13_RS28635 () 30406..30918 + 513 WP_001286759.1 IncHI-type conjugal transfer protein TrhF -
GTP13_RS28640 () 30905..32416 + 1512 WP_001256133.1 hypothetical protein -
GTP13_RS28645 () 32561..33616 + 1056 WP_181196458.1 IncHI-type conjugal transfer protein TrhU -
GTP13_RS28650 () 33635..36823 + 3189 WP_000776705.1 IncHI-type conjugal transfer protein TrhN -
GTP13_RS28655 () 36852..37724 - 873 WP_000771832.1 hypothetical protein -
GTP13_RS28660 () 37904..39688 + 1785 WP_042634277.1 IncHI-type conjugal transfer helicase TrhI -
GTP13_RS28665 () 40083..40955 + 873 WP_000041927.1 hypothetical protein -
GTP13_RS28670 () 41013..41390 + 378 WP_000120822.1 hypothetical protein -
GTP13_RS28675 () 41451..42428 + 978 WP_042634278.1 hypothetical protein -
GTP13_RS28680 () 42486..43544 + 1059 WP_000063335.1 AAA family ATPase -
GTP13_RS28685 () 43676..43849 + 174 WP_001176647.1 hypothetical protein -
GTP13_RS28690 () 43913..45040 + 1128 WP_000174395.1 DUF3150 domain-containing protein -
GTP13_RS28695 () 45118..47130 + 2013 WP_046788423.1 VWA domain-containing protein -
GTP13_RS28700 () 47202..47423 + 222 WP_042634307.1 hypothetical protein -
GTP13_RS28705 () 47537..48769 + 1233 WP_000220381.1 toprim domain-containing protein -
GTP13_RS28710 () 49040..49561 + 522 WP_001010933.1 hypothetical protein -
GTP13_RS28715 () 49640..50518 + 879 WP_000762004.1 hypothetical protein -
GTP13_RS28720 () 50589..51524 + 936 WP_000691118.1 hypothetical protein -
GTP13_RS28725 () 51593..52513 + 921 WP_000991699.1 hypothetical protein -
GTP13_RS28730 () 52580..53518 + 939 WP_000472043.1 hypothetical protein -
GTP13_RS28735 () 53690..54646 + 957 WP_046788424.1 hypothetical protein -
GTP13_RS28740 () 54910..55185 + 276 WP_001004201.1 hypothetical protein -
GTP13_RS28745 () 55230..55820 + 591 WP_000578892.1 hypothetical protein -
GTP13_RS28750 () 55828..56085 + 258 WP_001371933.1 hypothetical protein -
GTP13_RS28755 () 56159..56695 + 537 WP_000107168.1 hypothetical protein -
GTP13_RS28760 () 56775..57158 + 384 WP_001424628.1 hypothetical protein -
GTP13_RS28765 () 57249..58211 + 963 WP_000119427.1 DNA replication protein -
GTP13_RS28770 () 58221..59126 + 906 WP_001198594.1 hypothetical protein -
GTP13_RS28775 () 59062..59406 + 345 WP_001805195.1 hypothetical protein -
GTP13_RS28780 () 59428..60603 - 1176 WP_000795947.1 tyrosine-type recombinase/integrase -
GTP13_RS28785 () 60774..60986 + 213 WP_001285422.1 hypothetical protein -
GTP13_RS28790 () 61347..62429 + 1083 WP_001232449.1 hypothetical protein -
GTP13_RS28795 () 62596..64095 - 1500 WP_001284313.1 kinase -
GTP13_RS28800 () 64121..65758 - 1638 WP_000081622.1 protein phosphatase 2C domain-containing protein -
GTP13_RS28805 () 65758..66798 - 1041 WP_001253653.1 VWA domain-containing protein -
GTP13_RS28810 () 66884..67522 - 639 WP_001253658.1 VWA domain-containing protein -
GTP13_RS28815 () 67522..68163 - 642 WP_000116681.1 TerD family protein -
GTP13_RS28820 () 68186..68824 - 639 WP_001253657.1 VWA domain-containing protein -
GTP13_RS28825 () 69287..69754 - 468 WP_001176767.1 tellurium resistance protein TerW -
GTP13_RS28830 () 69772..70980 - 1209 WP_000506887.1 DUF4236 domain-containing protein -
GTP13_RS28835 () 70991..71947 - 957 WP_000797366.1 HpcH/HpaI aldolase/citrate lyase family protein -
GTP13_RS28840 () 71947..73026 - 1080 WP_001182411.1 cysteine protease StiP family protein -
GTP13_RS28845 () 73028..73801 - 774 WP_001040056.1 hypothetical protein -
GTP13_RS28850 () 73794..74936 - 1143 WP_001280118.1 phosphoribosyltransferase domain-containing protein -
GTP13_RS28855 () 74946..76004 - 1059 WP_001035166.1 ATP-grasp domain-containing protein -
GTP13_RS28860 () 76327..76908 + 582 WP_000254140.1 tellurium resistance TerZ family protein -
GTP13_RS28865 () 76908..78065 + 1158 WP_001054789.1 TerD family protein -
GTP13_RS28870 () 78088..78543 + 456 WP_000007449.1 tellurite resistance TerB family protein -
GTP13_RS28875 () 78566..79606 + 1041 WP_000255079.1 tellurium resistance membrane protein TerC -
GTP13_RS28880 () 79655..80233 + 579 WP_000116680.1 tellurium resistance membrane protein TerD -
GTP13_RS28885 () 80301..80876 + 576 WP_000301242.1 TerD family protein -
GTP13_RS28890 () 81305..82546 + 1242 WP_001053338.1 VWA domain-containing protein -
GTP13_RS28895 () 83109..83390 - 282 WP_000077926.1 hypothetical protein -
GTP13_RS28900 () 83440..83631 - 192 WP_000398480.1 hypothetical protein -
GTP13_RS28905 () 83723..84064 - 342 WP_001151575.1 hypothetical protein -
GTP13_RS28910 () 84437..84829 + 393 WP_000341066.1 hypothetical protein -
GTP13_RS28915 () 85433..85726 + 294 WP_024136327.1 helix-turn-helix transcriptional regulator Antitoxin Detail
GTP13_RS28920 () 85731..87056 + 1326 WP_000088046.1 type II toxin-antitoxin system HipA family toxin Toxin Detail
GTP13_RS28925 () 87117..87323 + 207 WP_000134171.1 hypothetical protein -
GTP13_RS28930 () 87425..87835 + 411 WP_000985911.1 hypothetical protein -
GTP13_RS28935 () 87848..88663 + 816 WP_001572439.1 HNH endonuclease -
GTP13_RS28940 () 88917..89342 + 426 WP_001043843.1 hypothetical protein -
GTP13_RS28945 () 89796..90033 + 238 Protein_86 hypothetical protein -
GTP13_RS28950 () 90088..90387 + 300 WP_001572440.1 hypothetical protein -
GTP13_RS28955 () 90700..92739 - 2040 WP_032192809.1 ATP-dependent helicase -
GTP13_RS28960 () 92736..93722 - 987 WP_001572342.1 hypothetical protein -
GTP13_RS28965 () 94308..94691 + 384 Protein_90 HNH endonuclease -
GTP13_RS28970 () 94753..94956 + 204 WP_001194555.1 hypothetical protein -
GTP13_RS28975 () 95298..95702 - 405 WP_001287392.1 H-NS histone family protein -
GTP13_RS28980 () 96200..96436 - 237 WP_000175476.1 hypothetical protein -
GTP13_RS28985 () 96478..96933 - 456 WP_001572344.1 hypothetical protein -
GTP13_RS28990 () 96993..97658 - 666 WP_000490638.1 hypothetical protein -
GTP13_RS28995 () 97716..98096 - 381 WP_001426317.1 hypothetical protein -
GTP13_RS29000 () 98739..99557 + 819 WP_000193209.1 DUF4942 domain-containing protein -
GTP13_RS29005 () 99554..100759 + 1206 WP_001572381.1 hypothetical protein -
GTP13_RS29010 () 101039..102358 - 1320 WP_000078514.1 DUF1173 family protein -
GTP13_RS29015 () 102381..102548 - 168 WP_000220758.1 hypothetical protein -
GTP13_RS29020 () 102609..103892 - 1284 Protein_101 DNA cytosine methyltransferase -
GTP13_RS29025 () 103947..104651 - 705 WP_001067855.1 IS6 family transposase IS15 Transposase
GTP13_RS29030 () 104715..105187 + 473 Protein_103 IS6 family transposase IS15 Transposase
GTP13_RS29035 () 105279..105665 + 387 WP_063102497.1 bleomycin binding protein -
GTP13_RS29040 () 105985..106377 - 393 WP_057109146.1 pyridoxamine 5'-phosphate oxidase family protein -
GTP13_RS29045 () 106712..107416 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
GTP13_RS29050 () 107482..108393 - 912 Protein_107 DUF4158 domain-containing protein -
GTP13_RS29055 () 108396..108962 - 567 WP_167583015.1 Tn3 family transposase TnpR_TnAs3 Transposase
GTP13_RS29060 () 108987..109691 + 705 WP_001067858.1 Tn3 family transposase TnpR_TnAs3 Transposase
GTP13_RS29065 () 109731..109997 + 267 Protein_110 tyrosine-type recombinase/integrase -
GTP13_RS29070 () 110200..110550 + 351 WP_000454193.1 DUF3330 domain-containing protein -
GTP13_RS29075 () 110769..111473 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
GTP13_RS29080 () 111684..112445 + 762 WP_001167416.1 methyltransferase -
GTP13_RS29085 () 112539..112802 + 264 WP_000149861.1 hypothetical protein -
GTP13_RS29090 () 112847..113434 + 588 WP_000491822.1 hypothetical protein -
GTP13_RS29095 () 113899..116319 + 2421 WP_000681217.1 DUF4165 domain-containing protein -
GTP13_RS29100 () 118317..119405 - 1089 WP_000159529.1 IncHI-type plasmid replication initiator protein RepHI2 -
GTP13_RS29105 () 120513..121523 - 1011 Protein_118 hypothetical protein -
GTP13_RS29110 () 121584..122288 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
GTP13_RS29115 () 122343..123371 + 1029 Protein_120 Tn3 family transposase -
GTP13_RS29120 () 123380..123781 + 402 WP_046788546.1 hypothetical protein -
GTP13_RS29125 () 123866..124570 - 705 WP_001067784.1 IS6 family transposase IS1006 Transposase
GTP13_RS29130 () 124634..125464 + 831 Protein_123 IS91 family transposase ISVsa3 Transposase
GTP13_RS31180 () 125933..126379 + 447 Protein_124 DUF3363 domain-containing protein -
GTP13_RS29140 () 126596..127810 + 1215 WP_000214122.1 Bicyclomycin resistance protein ARG
GTP13_RS29145 () 127838..128143 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
GTP13_RS29150 () 128255..129748 + 1494 WP_015344975.1 IS91 family transposase ISVsa3 Transposase
GTP13_RS29160 () 129984..130226 - 243 Protein_128 phosphoglucosamine mutase -
GTP13_RS29165 () 130313..131128 - 816 WP_001043260.1 Dihydropteroate synthase ARG
GTP13_RS29170 () 131218..132308 + 1091 WP_085940648.1 IS4 family transposase ISAba1 Transposase
GTP13_RS29180 () 132505..132990 - 486 WP_006581703.1 hypothetical protein -
GTP13_RS29185 () 133028..133180 - 153 Protein_132 phenol hydroxylase -
GTP13_RS29190 () 133216..134715 - 1500 Protein_133 Tn3 family transposase TnpA_ISRsp12 Transposase
GTP13_RS29195 () 134801..135553 + 753 WP_000602738.1 IS6 family transposase -
GTP13_RS29200 () 135604..135969 - 366 Protein_135 AAC(3) family N-acetyltransferase -
GTP13_RS29205 () 135975..137000 - 1026 WP_000742814.1 Hygromycin-B 4-O-kinase ARG
GTP13_RS29210 () 137229..138005 - 777 WP_001199192.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
GTP13_RS29215 () 138119..138823 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29220 () 138967..139521 + 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
GTP13_RS29225 () 139652..140482 + 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
GTP13_RS29230 () 140620..141252 + 633 WP_000186237.1 Chloramphenicol acetyltransferase VF
GTP13_RS29235 () 141337..141789 + 453 WP_001749986.1 hypothetical protein ARG
GTP13_RS29240 () 142012..142359 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
GTP13_RS29245 () 142353..143192 + 840 WP_000259031.1 Dihydropteroate synthase ARG
GTP13_RS29250 () 143320..143523 + 204 WP_000376616.1 hypothetical protein -
GTP13_RS29255 () 143748..144452 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29260 () 144455..145093 - 639 Protein_147 AadA family aminoglycoside 3''-O-nucleotidyltransferase -
GTP13_RS29265 () 145099..145389 - 291 WP_001336345.1 DUF1010 domain-containing protein -
GTP13_RS29270 () 145501..145998 - 498 WP_001083725.1 Dihydrofolate reductase ARG
GTP13_RS29275 () 146143..146340 + 198 Protein_150 IS6 family transposase IS15 Transposase
GTP13_RS29280 () 146403..147107 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29285 () 147297..148112 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
GTP13_RS29290 () 148263..148967 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29295 () 149198..150061 + 864 WP_000612791.1 SDR family oxidoreductase -
GTP13_RS29300 () 150099..150344 + 246 WP_001354008.1 GrpB family protein -
GTP13_RS29305 () 150813..151604 + 792 WP_000034420.1 Dihydropteroate synthase ARG
GTP13_RS29310 () 151607..151882 - 276 WP_109023896.1 hypothetical protein -
GTP13_RS29315 () 151884..152519 + 636 Protein_158 IS256 family transposase IS406 Transposase
GTP13_RS29320 () 152784..153116 - 333 WP_000800531.1 quaternary ammonium compound efflux SMR transporter QacL -
GTP13_RS29325 () 153286..154077 - 792 WP_001206316.1 Streptomycin 3''-adenylyltransferase ARG
GTP13_RS29330 () 154170..155429 - 1260 WP_000095725.1 Bicyclomycin resistance protein ARG
GTP13_RS29335 () 155691..156482 - 792 WP_001261740.1 Streptomycin 3''-adenylyltransferase ARG
GTP13_RS29340 () 156540..157148 - 609 WP_000050382.1 HAD-IB family hydrolase -
GTP13_RS29345 () 157244..158086 - 843 WP_001456218.1 alpha/beta fold putative hydrolase EstX -
GTP13_RS29350 () 158253..159020 + 768 Protein_165 class 1 integron integrase IntI1 -
GTP13_RS29355 () 159084..159788 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
GTP13_RS29360 () 159840..160229 - 390 Protein_167 Tn3 family transposase TnpA_Tn3 Transposase
GTP13_RS29365 () 160297..160536 + 240 Protein_168 IS6 family transposase -
GTP13_RS29370 () 160588..161292 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29375 () 161339..162865 - 1527 Protein_170 Tn3-like element TnAs1 family transposase -
GTP13_RS29380 () 162931..163635 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29385 () 163758..164000 + 243 WP_000844627.1 transposase -
GTP13_RS29390 () 164032..164682 - 651 WP_001493764.1 tetracycline resistance transcriptional repressor TetR(A) -
GTP13_RS29395 () 164788..165987 + 1200 WP_001493765.1 tetracycline efflux MFS transporter Tet(A) -
GTP13_RS29400 () 166019..166903 - 885 WP_000058717.1 EamA family transporter -
GTP13_RS29405 () 167041..167448 - 408 WP_001214976.1 cysteine hydrolase -
GTP13_RS29410 () 167437..169188 + 1752 Protein_177 Tn3-like element TnAs1 family transposase -
GTP13_RS29415 () 169298..169648 + 351 WP_031613424.1 hypothetical protein -
GTP13_RS29420 () 170025..170342 + 318 WP_029698059.1 hypothetical protein -
GTP13_RS29425 () 170393..170800 - 408 WP_000074418.1 hypothetical protein -
GTP13_RS29430 () 170830..171291 - 462 WP_000185304.1 hypothetical protein -
GTP13_RS29435 () 171628..171858 - 231 WP_001572393.1 hypothetical protein -
GTP13_RS29440 () 172520..172753 - 234 WP_015059496.1 hypothetical protein -
GTP13_RS29445 () 172975..173871 - 897 WP_000975182.1 hypothetical protein -
GTP13_RS29450 () 173874..174389 - 516 WP_001572389.1 thermonuclease family protein -
GTP13_RS29455 () 174604..174753 + 150 Protein_186 DNA (cytosine-5-)-methyltransferase -
GTP13_RS29460 () 174817..175521 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
GTP13_RS29465 () 175639..175842 - 204 WP_000376616.1 hypothetical protein -
GTP13_RS29470 () 175970..176809 - 840 WP_000259031.1 Dihydropteroate synthase ARG
GTP13_RS29475 () 176803..177009 - 207 Protein_190 QacE family quaternary ammonium compound efflux SMR transporter -
GTP13_RS29480 () 176990..177154 + 165 WP_072644484.1 cupin domain-containing protein -
GTP13_RS29485 () 177179..178096 - 918 Protein_192 Tn3 family transposase TnpA_Tn3 Transposase
GTP13_RS29490 () 178160..178864 + 705 WP_001067858.1 Tn3 family transposase TnpA_Tn3 Transposase
GTP13_RS29495 () 178898..180373 - 1476 WP_167583021.1 DUF4165 domain-containing protein -
GTP13_RS29500 () 180746..181372 + 627 WP_000966519.1 hypothetical protein -
GTP13_RS29505 () 181430..181711 - 282 WP_000535422.1 hypothetical protein -
GTP13_RS29510 () 181692..182153 - 462 WP_000502497.1 hypothetical protein -
GTP13_RS29515 () 182202..182378 - 177 WP_000070863.1 hypothetical protein -
GTP13_RS29520 () 182375..184066 - 1692 WP_042634269.1 DUF4942 domain-containing protein -
GTP13_RS29525 () 184314..185477 - 1164 WP_000114859.1 hypothetical protein -
GTP13_RS29530 () 185847..186659 + 813 WP_001121575.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
GTP13_RS29535 () 186668..187522 - 855 WP_000970403.1 hypothetical protein -
GTP13_RS29540 () 187757..188473 - 717 WP_046788421.1 zinc finger-like domain-containing protein -
GTP13_RS29545 () 188470..188670 - 201 WP_000594931.1 hypothetical protein -
GTP13_RS29550 () 188688..189743 - 1056 WP_001065779.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance