MGE detailed information
MGE type: Genomic_island MGE length: 18469 bp
Accession: NZ_CP047378 Location: 4907000..4925468 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Accession: NZ_CP047378 Location: 4907000..4925468 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS25075 () | 4903325..4904533 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| GTP13_RS25080 () | 4904559..4905890 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| GTP13_RS25085 () | 4905912..4906901 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| GTP13_RS25090 () | 4907000..4907938 | - | 939 | WP_000104212.1 | transcriptional regulator TdcA | - |
| GTP13_RS25095 () | 4908127..4908471 | + | 345 | WP_000145820.1 | transcriptional activator TdcR | - |
| GTP13_RS25100 () | 4908727..4909266 | + | 540 | WP_000675745.1 | hypothetical protein | - |
| GTP13_RS25105 () | 4909288..4910475 | + | 1188 | WP_096317453.1 | YhaC family protein | - |
| GTP13_RS25115 () | 4911279..4912424 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| GTP13_RS25120 () | 4912521..4913411 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| GTP13_RS25125 () | 4913441..4914211 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| GTP13_RS25130 () | 4914227..4915561 | - | 1335 | WP_096245719.1 | galactarate/glucarate/glycerate transporter GarP | - |
| GTP13_RS25135 () | 4915936..4917507 | + | 1572 | WP_096245720.1 | galactarate dehydratase | - |
| GTP13_RS25140 () | 4917656..4917991 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| GTP13_RS25145 () | 4917991..4918455 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| GTP13_RS25150 () | 4918510..4919319 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| GTP13_RS25155 () | 4919568..4920848 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| GTP13_RS25160 () | 4920871..4921344 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| GTP13_RS25165 () | 4921355..4922134 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| GTP13_RS25170 () | 4922124..4922321 | + | 198 | Protein_4907 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| GTP13_RS25175 () | 4922379..4923073 | + | 695 | WP_085949012.1 | IS1 family transposase IS1N | Transposase |
| GTP13_RS25180 () | 4923089..4923709 | + | 621 | Protein_4909 | galactosamine-6-phosphate isomerase | - |
| GTP13_RS25185 () | 4924109..4924693 | + | 585 | WP_001045442.1 | hypothetical protein | VF |
| GTP13_RS25190 () | 4924773..4925468 | + | 696 | WP_167582946.1 | hypothetical protein | VF |
| GTP13_RS25195 () | 4925498..4928014 | + | 2517 | WP_001136476.1 | fimbrial biogenesis outer membrane usher protein | - |
| GTP13_RS25200 () | 4928025..4929116 | + | 1092 | WP_000817005.1 | fimbrial protein | - |
| GTP13_RS25205 () | 4929159..4930019 | - | 861 | WP_000809253.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|