MGE detailed information
MGE type: Prophage MGE length: 56567 bp
Accession: NZ_CP047378 Location: 4687827..4744393 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Accession: NZ_CP047378 Location: 4687827..4744393 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS24040 () | 4683076..4684122 | - | 1047 | WP_000394117.1 | L-asparaginase 2 | - |
| GTP13_RS24045 () | 4684298..4685017 | - | 720 | WP_000984796.1 | DUF2884 domain-containing protein | - |
| GTP13_RS24050 () | 4685201..4685527 | - | 327 | WP_001107564.1 | YggL family protein | - |
| GTP13_RS24055 () | 4685527..4686246 | - | 720 | WP_000786911.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| GTP13_RS24060 () | 4686407..4687459 | + | 1053 | WP_001321419.1 | A/G-specific adenine glycosylase | - |
| GTP13_RS24065 () | 4687487..4687762 | + | 276 | WP_000091700.1 | oxidative damage protection protein | - |
| GTP13_RS24070 () | 4687827..4688906 | + | 1080 | WP_000760323.1 | membrane-bound lytic murein transglycosylase MltC | - |
| GTP13_RS24075 () | 4689108..4690364 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| GTP13_RS24080 () | 4690414..4692549 | - | 2136 | WP_000839764.1 | ornithine decarboxylase | - |
| GTP13_RS24085 () | 4692947..4693654 | + | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| GTP13_RS24095 () | 4694033..4695295 | + | 1263 | WP_167582929.1 | hypothetical protein ; Integrase | Integrase |
| GTP13_RS24100 () | 4695708..4696405 | + | 698 | Protein_4695 | IS1 family transposase IS1R | Transposase |
| GTP13_RS31175 () | 4696546..4696809 | + | 264 | WP_001406640.1 | hypothetical protein | - |
| GTP13_RS24110 () | 4697277..4697980 | - | 704 | Protein_4697 | DUF2931 family protein | - |
| GTP13_RS24115 () | 4698281..4701130 | + | 2850 | WP_000286652.1 | DEAD/DEAH box helicase | - |
| GTP13_RS24120 () | 4701156..4702136 | + | 981 | WP_001273465.1 | ATP-binding protein | - |
| GTP13_RS24125 () | 4702146..4704533 | + | 2388 | WP_000126413.1 | S8 family peptidase | - |
| GTP13_RS24130 () | 4704543..4706171 | + | 1629 | WP_000105162.1 | site-specific DNA-methyltransferase | - |
| GTP13_RS24135 () | 4706174..4709044 | + | 2871 | WP_000081335.1 | DEAD/DEAH box helicase family protein | - |
| GTP13_RS24140 () | 4709133..4709426 | + | 294 | WP_024237546.1 | hypothetical protein | - |
| GTP13_RS24145 () | 4709496..4709753 | + | 258 | Protein_4704 | IS3 family transposase IS911 | Transposase |
| GTP13_RS24150 () | 4709766..4710077 | - | 312 | Protein_4705 | IS30 family transposase IS30D | Transposase |
| GTP13_RS24155 () | 4710121..4711333 | - | 1213 | Protein_4706 | IS3 family transposase IS629 | Transposase |
| GTP13_RS24160 () | 4711472..4712758 | - | 1287 | WP_000005572.1 | McrC family protein | - |
| GTP13_RS24165 () | 4712751..4714808 | - | 2058 | WP_000366615.1 | AAA family ATPase | - |
| GTP13_RS24170 () | 4715581..4716006 | - | 426 | WP_001013334.1 | hypothetical protein | - |
| GTP13_RS24175 () | 4716003..4716386 | - | 384 | WP_176479844.1 | hypothetical protein | - |
| GTP13_RS24180 () | 4716646..4717215 | - | 570 | WP_001545062.1 | inovirus Gp2 family protein | - |
| GTP13_RS24185 () | 4717684..4717823 | - | 140 | Protein_4712 | hypothetical protein | - |
| GTP13_RS24195 () | 4719856..4720062 | + | 207 | WP_001095911.1 | AlpA family transcriptional regulator | - |
| GTP13_RS24200 () | 4720150..4720632 | + | 483 | Protein_4715 | hypothetical protein | - |
| GTP13_RS24205 () | 4720662..4722200 | - | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| GTP13_RS24210 () | 4722249..4722596 | - | 348 | WP_106485702.1 | IS66 family transposase ISKpn24 | Transposase |
| GTP13_RS24215 () | 4722593..4722997 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| GTP13_RS24220 () | 4722996..4723220 | + | 225 | WP_106485667.1 | hypothetical protein | - |
| GTP13_RS24225 () | 4724717..4725169 | + | 453 | Protein_4720 | hypothetical protein | - |
| GTP13_RS24230 () | 4725170..4725682 | + | 513 | WP_024210936.1 | hypothetical protein | - |
| GTP13_RS24235 () | 4725766..4726638 | + | 873 | WP_167582932.1 | GTPase family protein | - |
| GTP13_RS24240 () | 4727011..4729857 | + | 2847 | WP_167582935.1 | Ag43/Cah family autotransporter adhesin | - |
| GTP13_RS24245 () | 4730185..4731003 | + | 819 | WP_001234702.1 | DUF945 domain-containing protein | - |
| GTP13_RS24250 () | 4731094..4731579 | + | 486 | WP_064559960.1 | antirestriction protein | - |
| GTP13_RS24255 () | 4731595..4732071 | + | 477 | WP_162008690.1 | RadC family protein | - |
| GTP13_RS24260 () | 4732158..4732379 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| GTP13_RS24265 () | 4732459..4732827 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GTP13_RS24270 () | 4732917..4733294 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| GTP13_RS24275 () | 4733291..4733488 | + | 198 | Protein_4730 | hypothetical protein | - |
| GTP13_RS24280 () | 4733516..4733713 | + | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| GTP13_RS24285 () | 4733798..4734640 | + | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| GTP13_RS24290 () | 4734921..4735457 | - | 537 | WP_000942795.1 | hypothetical protein | VF |
| GTP13_RS24295 () | 4735459..4736637 | - | 1179 | WP_000097220.1 | hypothetical protein | VF |
| GTP13_RS24300 () | 4736634..4737611 | - | 978 | WP_000633210.1 | hypothetical protein | VF |
| GTP13_RS24305 () | 4737608..4738213 | - | 606 | WP_001255030.1 | hypothetical protein | VF |
| GTP13_RS24310 () | 4738210..4738581 | - | 372 | WP_000820123.1 | hypothetical protein | VF |
| GTP13_RS24315 () | 4738578..4739141 | - | 564 | WP_001115141.1 | hypothetical protein | VF |
| GTP13_RS24320 () | 4739145..4739600 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| GTP13_RS24325 () | 4739617..4740840 | - | 1224 | WP_001173448.1 | hypothetical protein | VF |
| GTP13_RS24330 () | 4740840..4742333 | - | 1494 | Protein_4741 | hypothetical protein | VF |
| GTP13_RS24335 () | 4742333..4744393 | - | 2061 | WP_000498824.1 | hypothetical protein | VF |
| GTP13_RS24340 () | 4744423..4745382 | - | 960 | WP_000135062.1 | type II secretion system protein GspC | - |
| GTP13_RS24345 () | 4745400..4745810 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| GTP13_RS24350 () | 4745876..4746685 | - | 810 | WP_001297673.1 | prepilin peptidase PppA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|