MGE detailed information
MGE type: IScluster/Tn MGE length: 55108 bp
Accession: NZ_CP047375 Location: 42477..97584 Organism: Aeromonas salmonicida subsp. salmonicida strain J409 Replicon: plasmid p1AsJ409
Accession: NZ_CP047375 Location: 42477..97584 Organism: Aeromonas salmonicida subsp. salmonicida strain J409 Replicon: plasmid p1AsJ409
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO992_RS22275 () | 38370..39023 | + | 654 | WP_042468169.1 | SctR family type III secretion system export apparatus subunit AscR | - |
| GO992_RS22280 () | 39025..39291 | + | 267 | WP_005320743.1 | SctS family type III secretion system export apparatus subunit AscS | - |
| GO992_RS22285 () | 39288..40076 | + | 789 | WP_005320741.1 | SctT family type III secretion system export apparatus subunit AscT | - |
| GO992_RS22290 () | 40073..41131 | + | 1059 | WP_005320739.1 | SctU family type III secretion system export apparatus subunit AscU | - |
| GO992_RS22295 () | 41269..42065 | + | 797 | Protein_54 | hypothetical protein | - |
| GO992_RS22300 () | 42065..42445 | + | 381 | WP_017411822.1 | hypothetical protein | - |
| GO992_RS22305 () | 42477..42776 | - | 300 | Protein_56 | IS30 family transposase ISAhy3 | Transposase |
| GO992_RS22310 () | 42841..43813 | + | 973 | Protein_57 | IS5 family transposase ISKpn26 | Transposase |
| GO992_RS22315 () | 44769..45629 | + | 861 | WP_011899444.1 | alpha/beta hydrolase | - |
| GO992_RS22320 () | 45925..46842 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22325 () | 47021..47311 | - | 291 | WP_159365008.1 | CopG family transcriptional regulator | - |
| GO992_RS22330 () | 47311..47949 | - | 639 | WP_042469195.1 | AAA family ATPase | - |
| GO992_RS22335 () | 48206..48736 | + | 531 | Protein_62 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GO992_RS22340 () | 48793..49710 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22345 () | 49899..50143 | + | 245 | Protein_64 | hypothetical protein | - |
| GO992_RS22350 () | 50355..50486 | - | 132 | WP_159365010.1 | DUF45 domain-containing protein | - |
| GO992_RS22355 () | 50557..51474 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22360 () | 51564..51968 | - | 405 | Protein_67 | DUF45 domain-containing protein | - |
| GO992_RS22365 () | 52058..52975 | + | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22370 () | 53019..53342 | - | 324 | Protein_69 | WYL domain-containing protein | - |
| GO992_RS22375 () | 53478..53605 | + | 128 | Protein_70 | transposase | - |
| GO992_RS22380 () | 53846..54028 | - | 183 | WP_080697447.1 | hypothetical protein | - |
| GO992_RS22385 () | 54193..54345 | - | 153 | WP_005322083.1 | Hok/Gef family protein | - |
| GO992_RS22390 () | 54853..55353 | - | 501 | WP_159365012.1 | hypothetical protein | - |
| GO992_RS22395 () | 55376..55678 | - | 303 | WP_005321626.1 | hypothetical protein | - |
| GO992_RS22400 () | 56144..56506 | - | 363 | WP_139394881.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GO992_RS22405 () | 56506..56766 | - | 261 | WP_139394880.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GO992_RS22410 () | 56867..57252 | - | 386 | Protein_77 | hypothetical protein | - |
| GO992_RS22415 () | 57449..57544 | + | 96 | Protein_78 | IS630 family transposase ISAhy2 | Transposase |
| GO992_RS22420 () | 57541..58503 | - | 963 | Protein_79 | IS630 family transposase ISAhy2 | Transposase |
| GO992_RS22425 () | 58592..58921 | - | 330 | WP_159365013.1 | YcaO-like family protein | - |
| GO992_RS22430 () | 58918..59124 | - | 207 | WP_159365014.1 | hypothetical protein | - |
| GO992_RS22435 () | 59126..60040 | - | 915 | WP_042468951.1 | TOMM precursor leader peptide-binding protein | - |
| GO992_RS22440 () | 60827..61102 | - | 276 | WP_159365015.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GO992_RS22445 () | 61102..61383 | - | 282 | WP_174416604.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GO992_RS22450 () | 61595..62155 | + | 561 | WP_042468955.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GO992_RS22455 () | 62159..65187 | + | 3029 | Protein_86 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| GO992_RS22460 () | 65222..65896 | + | 675 | Protein_87 | IS21 family transposase ISAs28 | Transposase |
| GO992_RS22465 () | 65922..66641 | + | 720 | WP_042468959.1 | IS21 family transposase ISAs27 | Transposase |
| GO992_RS22470 () | 66860..67777 | - | 918 | WP_159365016.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22475 () | 68273..68458 | - | 186 | WP_159365017.1 | hypothetical protein | - |
| GO992_RS22480 () | 68588..68740 | - | 153 | WP_043145146.1 | type I toxin-antitoxin system Hok family toxin | - |
| GO992_RS22485 () | 69191..69631 | + | 441 | WP_005321180.1 | hypothetical protein | VF |
| GO992_RS22490 () | 69638..71823 | + | 2186 | Protein_93 | Protein kinase YpkA | VF |
| GO992_RS22495 () | 71834..72203 | - | 370 | Protein_94 | IS630 family transposase ISAeme16 | Transposase |
| GO992_RS22500 () | 72262..73179 | - | 918 | WP_088814108.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22505 () | 73456..73854 | + | 399 | WP_159368388.1 | hypothetical protein | - |
| GO992_RS22510 () | 73899..74816 | + | 918 | WP_159364279.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22515 () | 74896..75291 | + | 396 | WP_159368389.1 | ABC transporter permease | - |
| GO992_RS22520 () | 75947..76357 | - | 411 | WP_159365021.1 | H-NS histone family protein | - |
| GO992_RS22525 () | 77079..77912 | - | 834 | WP_043774562.1 | hypothetical protein | - |
| GO992_RS22530 () | 78698..79270 | + | 573 | WP_005321586.1 | AAA family ATPase | - |
| GO992_RS22535 () | 79270..79617 | + | 348 | WP_005321591.1 | hypothetical protein | - |
| GO992_RS22540 () | 79657..80871 | - | 1215 | WP_159364953.1 | IS256 family transposase ISAs3 | Transposase |
| GO992_RS22545 () | 81127..81234 | - | 108 | Protein_104 | IS3 family transposase ISAve4 | Transposase |
| GO992_RS22550 () | 81334..82878 | - | 1545 | WP_159365022.1 | hypothetical protein | VF |
| GO992_RS22555 () | 82922..83371 | - | 450 | WP_159365023.1 | hypothetical protein | VF |
| GO992_RS22560 () | 83571..83663 | + | 93 | Protein_107 | IS5 family transposase | - |
| GO992_RS22565 () | 83716..84633 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22570 () | 84910..85308 | + | 399 | WP_159368388.1 | hypothetical protein | - |
| GO992_RS22575 () | 85353..86270 | + | 918 | WP_159364279.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22580 () | 86350..86745 | + | 396 | WP_159368389.1 | ABC transporter permease | - |
| GO992_RS22585 () | 87401..87811 | - | 411 | WP_159365021.1 | H-NS histone family protein | - |
| GO992_RS22590 () | 88532..89365 | - | 834 | WP_043774562.1 | hypothetical protein | - |
| GO992_RS22595 () | 90151..90723 | + | 573 | WP_005321586.1 | AAA family ATPase | - |
| GO992_RS22600 () | 90723..91070 | + | 348 | WP_005321591.1 | hypothetical protein | - |
| GO992_RS22605 () | 91110..92324 | - | 1215 | WP_159364953.1 | IS256 family transposase ISAs3 | Transposase |
| GO992_RS22610 () | 92580..92687 | - | 108 | Protein_117 | IS3 family transposase ISAve4 | Transposase |
| GO992_RS22615 () | 92787..94330 | - | 1544 | Protein_118 | hypothetical protein | VF |
| GO992_RS22620 () | 94374..94823 | - | 450 | WP_159365023.1 | hypothetical protein | VF |
| GO992_RS22625 () | 95023..95115 | + | 93 | Protein_120 | IS5 family transposase | - |
| GO992_RS22630 () | 95168..96085 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| GO992_RS22635 () | 96190..96372 | + | 183 | Protein_122 | IS5 family transposase ISAs15 | Transposase |
| GO992_RS22640 () | 96668..97690 | - | 1023 | Protein_123 | IS110 family transposase | - |
| GO992_RS22645 () | 97937..98221 | + | 285 | Protein_124 | crossover junction endodeoxyribonuclease RuvC | - |
| GO992_RS22650 () | 98319..98982 | - | 664 | Protein_125 | SctL family type III secretion system stator protein AscL | - |
| GO992_RS22655 () | 98966..99586 | - | 621 | WP_159368390.1 | SctK family type III secretion system sorting platform protein AscK | - |
| GO992_RS22660 () | 99583..99879 | - | 297 | Protein_127 | SctJ family type III secretion inner membrane ring lipoprotein AscJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|