MGE detailed information
MGE type: IScluster/Tn MGE length: 12577 bp
Accession: NZ_CP047312 Location: 276725..289301 Organism: Pseudomonas putida strain YC-AE1 Replicon: plasmid unnamed1
Accession: NZ_CP047312 Location: 276725..289301 Organism: Pseudomonas putida strain YC-AE1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GR140_RS29270 (GR140_29180) | 272410..273807 | + | 1398 | WP_212628575.1 | aldehyde dehydrogenase | - |
| GR140_RS29275 (GR140_29185) | 273847..274530 | + | 684 | WP_022684419.1 | nuclear transport factor 2 family protein | - |
| GR140_RS29280 (GR140_29190) | 274761..275078 | + | 318 | WP_119594020.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| GR140_RS29285 (GR140_29195) | 275153..276424 | + | 1272 | WP_212628576.1 | cytochrome P450 | - |
| GR140_RS29290 (GR140_29200) | 276526..276750 | - | 225 | Protein_356 | IS6 family transposase | - |
| GR140_RS29295 (GR140_29205) | 276743..278308 | + | 1566 | WP_212628620.1 | IS91 family transposase ISPps1 | Transposase |
| GR140_RS29300 (GR140_29210) | 278979..282008 | - | 3030 | WP_024015041.1 | Tn3 family transposase ISPsy42 | Transposase |
| GR140_RS29305 (GR140_29215) | 281992..282594 | - | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| GR140_RS29310 (GR140_29220) | 282786..283163 | + | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GR140_RS29315 (GR140_29225) | 283144..283479 | + | 336 | WP_001172026.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GR140_RS29320 (GR140_29230) | 283494..283828 | + | 335 | Protein_362 | transposase | - |
| GR140_RS29325 (GR140_29235) | 283852..284178 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| GR140_RS29330 (GR140_29240) | 284175..284600 | + | 426 | WP_249183623.1 | hypothetical protein | - |
| GR140_RS29335 (GR140_29245) | 284524..285453 | - | 930 | WP_003150544.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| GR140_RS29340 (GR140_29250) | 285655..285894 | + | 240 | WP_003089107.1 | ribbon-helix-helix domain-containing protein | - |
| GR140_RS29345 (GR140_29255) | 285894..286304 | + | 411 | WP_003150546.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| GR140_RS29350 (GR140_29260) | 286308..289301 | + | 2994 | WP_003299771.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| GR140_RS29355 (GR140_29265) | 289314..289526 | - | 213 | WP_003089113.1 | GDCCVxC domain-containing (seleno)protein | - |
| GR140_RS29360 (GR140_29270) | 289534..289809 | - | 276 | WP_003150552.1 | mercury resistance system periplasmic binding protein MerP | - |
| GR140_RS29365 (GR140_29275) | 289822..290172 | - | 351 | WP_003089115.1 | mercuric transporter MerT family protein | - |
| GR140_RS29370 (GR140_29280) | 290247..290645 | + | 399 | WP_003089120.1 | Hg(II)-responsive transcriptional regulator | - |
| GR140_RS29375 (GR140_29285) | 290635..290925 | - | 291 | WP_212628577.1 | hypothetical protein | - |
| GR140_RS29380 (GR140_29290) | 290918..291928 | - | 1011 | WP_212628578.1 | CBASS cGAMP-activated phospholipase | - |
| GR140_RS29385 (GR140_29295) | 293233..293592 | - | 360 | WP_034000447.1 | DUF805 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|