MGE detailed information
MGE type: IScluster/Tn MGE length: 19257 bp
Accession: NZ_CP047312 Location: 250947..270203 Organism: Pseudomonas putida strain YC-AE1 Replicon: plasmid unnamed1
Accession: NZ_CP047312 Location: 250947..270203 Organism: Pseudomonas putida strain YC-AE1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GR140_RS29095 (GR140_29005) | 246914..247123 | + | 210 | WP_052261128.1 | MbcA/ParS/Xre antitoxin family protein | - |
| GR140_RS29100 (GR140_29010) | 247149..247577 | + | 429 | WP_039615189.1 | hypothetical protein | - |
| GR140_RS29105 (GR140_29015) | 247593..247809 | - | 217 | Protein_318 | transcriptional regulator | - |
| GR140_RS29110 (GR140_29020) | 248075..248260 | - | 186 | WP_039615188.1 | hypothetical protein | - |
| GR140_RS29115 (GR140_29025) | 248462..249250 | - | 789 | WP_039615187.1 | inositol monophosphatase family protein | - |
| GR140_RS29120 (GR140_29030) | 249350..249610 | - | 261 | WP_039615186.1 | hypothetical protein | - |
| GR140_RS29125 (GR140_29035) | 249717..250172 | - | 456 | WP_052261126.1 | hypothetical protein | - |
| GR140_RS29130 (GR140_29040) | 250259..250546 | + | 288 | WP_039615203.1 | helix-turn-helix transcriptional regulator | - |
| GR140_RS29135 (GR140_29045) | 250680..250847 | + | 168 | WP_212628615.1 | hypothetical protein | - |
| GR140_RS29140 (GR140_29050) | 250947..251972 | + | 1026 | WP_039615184.1 | IS21 family transposase ISKpn7 | Transposase |
| GR140_RS29145 (GR140_29055) | 251969..252748 | + | 780 | WP_104963083.1 | IS21 family transposase ISKpn7 | Transposase |
| GR140_RS29150 (GR140_29060) | 252853..253218 | + | 366 | WP_039615182.1 | DNA binding protein | - |
| GR140_RS32825 (GR140_29065) | 253423..253509 | + | 87 | Protein_328 | helix-turn-helix domain-containing protein | - |
| GR140_RS29160 (GR140_29070) | 253550..253768 | - | 219 | WP_039615181.1 | BPSL0761 family protein | - |
| GR140_RS29165 (GR140_29075) | 253831..254421 | - | 591 | WP_039615180.1 | DUF6088 family protein | - |
| GR140_RS29170 (GR140_29080) | 254521..255309 | - | 789 | WP_052261125.1 | metallophosphoesterase | - |
| GR140_RS29175 (GR140_29085) | 255414..255557 | - | 144 | Protein_332 | IS3 family transposase ISPa20 | Transposase |
| GR140_RS29180 (GR140_29090) | 255689..256567 | - | 879 | Protein_333 | IS3 family transposase ISAzsp1 | Transposase |
| GR140_RS29185 (GR140_29095) | 256652..257050 | - | 399 | WP_003089120.1 | IS607 family transposase ISCfe1 | Transposase |
| GR140_RS29190 (GR140_29100) | 257125..257475 | + | 351 | WP_003089115.1 | mercuric transporter MerT family protein | - |
| GR140_RS29195 (GR140_29105) | 257488..257763 | + | 276 | WP_003150552.1 | mercury resistance system periplasmic binding protein MerP | - |
| GR140_RS29200 (GR140_29110) | 257771..257983 | + | 213 | WP_003089113.1 | GDCCVxC domain-containing (seleno)protein | - |
| GR140_RS29205 (GR140_29115) | 257996..260989 | - | 2994 | WP_003299771.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| GR140_RS29210 (GR140_29120) | 260993..261403 | - | 411 | WP_003150546.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| GR140_RS29215 (GR140_29125) | 261403..261642 | - | 240 | WP_003089107.1 | ribbon-helix-helix domain-containing protein | - |
| GR140_RS29220 (GR140_29130) | 261844..262773 | + | 930 | WP_003150544.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| GR140_RS29225 (GR140_29135) | 262697..263122 | - | 426 | WP_249183623.1 | hypothetical protein | - |
| GR140_RS29230 (GR140_29140) | 263119..263445 | - | 327 | WP_000091614.1 | hypothetical protein | - |
| GR140_RS29235 (GR140_29145) | 263469..263803 | - | 335 | Protein_344 | transposase | - |
| GR140_RS29240 (GR140_29150) | 263818..264153 | - | 336 | WP_001172026.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GR140_RS29245 (GR140_29155) | 264134..264511 | - | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GR140_RS29250 (GR140_29160) | 264703..265305 | + | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| GR140_RS29255 (GR140_29165) | 265289..268318 | + | 3030 | WP_024015041.1 | Tn3 family transposase ISPsy42 | Transposase |
| GR140_RS32830 | 268403..268519 | - | 117 | Protein_349 | helix-turn-helix domain-containing protein | - |
| GR140_RS29260 (GR140_29170) | 268647..270203 | + | 1557 | WP_212628573.1 | IS91 family transposase ISPps1 | Transposase |
| GR140_RS29265 (GR140_29175) | 270928..272367 | + | 1440 | WP_212628574.1 | carotenoid oxygenase family protein | - |
| GR140_RS29270 (GR140_29180) | 272410..273807 | + | 1398 | WP_212628575.1 | aldehyde dehydrogenase | - |
| GR140_RS29275 (GR140_29185) | 273847..274530 | + | 684 | WP_022684419.1 | nuclear transport factor 2 family protein | - |
| GR140_RS29280 (GR140_29190) | 274761..275078 | + | 318 | WP_119594020.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|