MGE detailed information
MGE type: Prophage MGE length: 44337 bp
Accession: NZ_CP047279 Location: 4115613..4159949 Organism: Citrobacter freundii strain N18-04128 Replicon: chromosome
Accession: NZ_CP047279 Location: 4115613..4159949 Organism: Citrobacter freundii strain N18-04128 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3113_RS19980 () | 4110939..4111289 | - | 351 | WP_003036925.1 | Morphinone reductase | - |
| F3113_RS19985 () | 4111565..4112842 | - | 1278 | WP_003036928.1 | DUF2254 domain-containing protein | - |
| F3113_RS19990 () | 4112907..4114904 | - | 1998 | WP_016245729.1 | choline BCCT transporter BetT | - |
| F3113_RS19995 () | 4115408..4115599 | + | 192 | Protein_3938 | DUF905 family protein | - |
| F3113_RS20000 () | 4115613..4116074 | + | 462 | WP_003031344.1 | antirestriction protein | - |
| F3113_RS20005 () | 4116090..4116566 | + | 477 | WP_003031345.1 | RadC family protein | - |
| F3113_RS20010 () | 4116575..4116796 | + | 222 | WP_003031346.1 | DUF987 domain-containing protein | - |
| F3113_RS20015 () | 4116814..4117131 | + | 318 | WP_003031347.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| F3113_RS20020 () | 4117152..4117493 | + | 342 | WP_003031349.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| F3113_RS20025 () | 4118083..4118574 | - | 492 | WP_121927018.1 | tail fiber assembly protein | - |
| F3113_RS20030 () | 4119695..4120138 | - | 444 | Protein_3945 | phage tail protein | - |
| F3113_RS20035 () | 4120138..4120818 | - | 681 | WP_121927014.1 | DUF2612 domain-containing protein | - |
| F3113_RS20040 () | 4120815..4122014 | - | 1200 | WP_121927013.1 | baseplate J/gp47 family protein | - |
| F3113_RS20045 () | 4122015..4122368 | - | 354 | WP_016239889.1 | hypothetical protein | - |
| F3113_RS20050 () | 4122368..4123108 | - | 741 | WP_108961687.1 | phage baseplate assembly protein V | - |
| F3113_RS20055 () | 4123324..4123674 | + | 351 | WP_047400359.1 | hypothetical protein | - |
| F3113_RS20060 () | 4123713..4123967 | - | 255 | Protein_3951 | hypothetical protein | - |
| F3113_RS20065 () | 4124604..4125671 | - | 1068 | WP_121927012.1 | hypothetical protein | - |
| F3113_RS20070 () | 4125674..4125979 | - | 306 | WP_001160174.1 | hypothetical protein | - |
| F3113_RS20075 () | 4125981..4126583 | - | 603 | WP_044702575.1 | hypothetical protein | - |
| F3113_RS20080 () | 4126583..4128586 | - | 2004 | WP_044702576.1 | hypothetical protein | - |
| F3113_RS20085 () | 4128764..4129189 | - | 426 | WP_000393957.1 | hypothetical protein | - |
| F3113_RS20090 () | 4129193..4129633 | - | 441 | WP_000257257.1 | DUF3277 family protein | - |
| F3113_RS20095 () | 4129644..4130804 | - | 1161 | WP_121927011.1 | DUF3383 domain-containing protein | - |
| F3113_RS20100 () | 4130808..4131371 | - | 564 | WP_044702578.1 | hypothetical protein | - |
| F3113_RS20105 () | 4131346..4131735 | - | 390 | WP_044702579.1 | hypothetical protein | - |
| F3113_RS20110 () | 4131722..4132276 | - | 555 | WP_121927010.1 | hypothetical protein | - |
| F3113_RS20115 () | 4132273..4132680 | - | 408 | WP_044702581.1 | DUF4054 domain-containing protein | - |
| F3113_RS20120 () | 4132646..4133035 | - | 390 | WP_006120171.1 | hypothetical protein | - |
| F3113_RS20125 () | 4133077..4134018 | - | 942 | WP_121927009.1 | DUF2184 domain-containing protein | - |
| F3113_RS20130 () | 4134030..4134533 | - | 504 | WP_006120173.1 | hypothetical protein | - |
| F3113_RS20135 () | 4134538..4135770 | - | 1233 | WP_121927008.1 | DUF2213 domain-containing protein | - |
| F3113_RS20140 () | 4135785..4136522 | - | 738 | WP_000224761.1 | minor capsid protein | - |
| F3113_RS20145 () | 4136407..4137876 | - | 1470 | WP_121927007.1 | DUF1073 domain-containing protein | - |
| F3113_RS20150 () | 4137876..4139498 | - | 1623 | WP_063217301.1 | TerL protein | - |
| F3113_RS20155 () | 4139501..4139974 | - | 474 | WP_000729396.1 | DUF2280 domain-containing protein | - |
| F3113_RS20160 () | 4140006..4140626 | - | 621 | WP_045356282.1 | hypothetical protein | - |
| F3113_RS20165 () | 4140681..4140866 | - | 186 | WP_021241734.1 | hypothetical protein | - |
| F3113_RS20170 () | 4141010..4141402 | - | 393 | WP_121927005.1 | DUF2570 domain-containing protein | - |
| F3113_RS20175 () | 4141399..4142013 | - | 615 | WP_121927004.1 | glycoside hydrolase family 19 protein | - |
| F3113_RS20180 () | 4142010..4142342 | - | 333 | WP_021241738.1 | phage holin, lambda family | - |
| F3113_RS20185 () | 4142417..4143030 | - | 614 | Protein_3976 | hypothetical protein | - |
| F3113_RS20190 () | 4142936..4143877 | - | 942 | WP_121927003.1 | hypothetical protein | - |
| F3113_RS20195 () | 4143871..4144422 | - | 552 | WP_121927002.1 | hypothetical protein | - |
| F3113_RS20200 () | 4144565..4145248 | - | 684 | WP_121927001.1 | hypothetical protein | - |
| F3113_RS20205 () | 4145245..4145604 | - | 360 | WP_121927000.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F3113_RS20210 () | 4145601..4145900 | - | 300 | WP_001245609.1 | DUF1364 family protein | - |
| F3113_RS20215 () | 4145890..4146342 | - | 453 | WP_121926999.1 | recombination protein NinB | - |
| F3113_RS20220 () | 4146584..4146922 | - | 339 | WP_121926998.1 | hypothetical protein | - |
| F3113_RS20225 () | 4146915..4147760 | - | 846 | WP_121926997.1 | DUF550 domain-containing protein | - |
| F3113_RS20230 () | 4147760..4148260 | - | 501 | WP_164846310.1 | hypothetical protein | - |
| F3113_RS20235 () | 4148257..4148595 | - | 339 | Protein_3986 | ead/Ea22-like family protein | - |
| F3113_RS20240 () | 4148733..4149023 | - | 291 | WP_121926996.1 | DUF4406 domain-containing protein | - |
| F3113_RS20245 () | 4149023..4150420 | - | 1398 | WP_021241753.1 | AAA family ATPase | - |
| F3113_RS20250 () | 4150417..4151307 | - | 891 | WP_103849087.1 | replication protein | - |
| F3113_RS20255 () | 4151294..4151458 | - | 165 | WP_021241755.1 | hypothetical protein | - |
| F3113_RS20260 () | 4151537..4151689 | - | 153 | WP_000278093.1 | hypothetical protein | - |
| F3113_RS20265 () | 4151794..4152114 | - | 321 | WP_103849086.1 | hypothetical protein | - |
| F3113_RS20270 () | 4152156..4152389 | - | 234 | WP_000795144.1 | helix-turn-helix domain-containing protein | - |
| F3113_RS20275 () | 4152518..4153210 | + | 693 | WP_044702929.1 | helix-turn-helix transcriptional regulator | - |
| F3113_RS20280 () | 4153473..4153673 | + | 201 | WP_021241757.1 | hypothetical protein | - |
| F3113_RS20285 () | 4153673..4153870 | + | 198 | WP_000501155.1 | DUF1482 family protein | - |
| F3113_RS20290 () | 4153881..4154153 | + | 273 | WP_121926995.1 | hypothetical protein | - |
| F3113_RS20295 () | 4154236..4154931 | + | 696 | WP_121926994.1 | hypothetical protein | VF |
| F3113_RS20300 () | 4154985..4155149 | + | 165 | WP_021242892.1 | hypothetical protein | - |
| F3113_RS20305 () | 4155133..4155804 | + | 672 | WP_019076110.1 | exodeoxyribonuclease X | - |
| F3113_RS20310 () | 4155804..4156472 | + | 669 | WP_019076109.1 | AAA family ATPase | - |
| F3113_RS20315 () | 4156489..4157220 | + | 732 | WP_121926993.1 | hypothetical protein | - |
| F3113_RS20320 () | 4157217..4157375 | + | 159 | WP_019076107.1 | DUF1317 family protein | - |
| F3113_RS20325 () | 4157426..4158277 | + | 852 | WP_121927015.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| F3113_RS20330 () | 4158280..4158519 | + | 240 | WP_029139424.1 | DUF4060 family protein | - |
| F3113_RS20335 () | 4158562..4158894 | + | 333 | Protein_4006 | helix-turn-helix domain-containing protein | - |
| F3113_RS20340 () | 4158786..4159949 | + | 1164 | WP_019076103.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| F3113_RS20350 () | 4160204..4160668 | - | 465 | WP_044702482.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| F3113_RS20355 () | 4160860..4162308 | - | 1449 | WP_044702495.1 | EAL domain-containing protein | - |
| F3113_RS20360 () | 4162650..4163123 | - | 474 | WP_044702484.1 | hypothetical protein | - |
| F3113_RS20365 () | 4163098..4163829 | - | 732 | WP_044702485.1 | winged helix-turn-helix domain-containing protein | - |
| F3113_RS20370 () | 4163974..4164669 | - | 696 | WP_003031358.1 | molecular chaperone | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|