MGE detailed information
MGE type: Prophage MGE length: 53949 bp
Accession: NZ_CP047277 Location: 2225073..2279021 Organism: Escherichia coli strain N18-04097 Replicon: chromosome
Accession: NZ_CP047277 Location: 2225073..2279021 Organism: Escherichia coli strain N18-04097 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3052_RS10640 () | 2221322..2223748 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| F3052_RS10645 () | 2223947..2224252 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| F3052_RS10650 () | 2224360..2225070 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| F3052_RS10655 () | 2225073..2225633 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| F3052_RS10660 () | 2225668..2226009 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| F3052_RS10665 () | 2226144..2226470 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| F3052_RS10670 () | 2226676..2227890 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| F3052_RS10675 () | 2227902..2228921 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| F3052_RS10680 () | 2228979..2229089 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| F3052_RS10685 () | 2229090..2230388 | - | 1299 | WP_021536962.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| F3052_RS10690 () | 2230423..2230674 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| F3052_RS10695 () | 2230747..2233218 | - | 2472 | Protein_2090 | 3'-5' exoribonuclease | - |
| F3052_RS10700 () | 2233311..2233502 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| F3052_RS10705 () | 2233499..2233687 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| F3052_RS10710 () | 2234255..2234473 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| F3052_RS10715 () | 2234633..2234788 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| F3052_RS10720 () | 2234955..2235362 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| F3052_RS10725 () | 2235446..2235676 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| F3052_RS10730 () | 2235660..2236181 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| F3052_RS10735 () | 2236162..2237127 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| F3052_RS10740 () | 2237168..2237590 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| F3052_RS10745 () | 2237587..2237943 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| F3052_RS24360 () | 2238554..2238841 | + | 288 | Protein_2101 | hypothetical protein | - |
| F3052_RS10750 () | 2239610..2240923 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| F3052_RS10755 () | 2241360..2241692 | - | 333 | WP_001301033.1 | protein FlxA | - |
| F3052_RS10760 () | 2241895..2242200 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| F3052_RS10765 () | 2242225..2242464 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| F3052_RS10770 () | 2242464..2242751 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| F3052_RS10775 () | 2242823..2242978 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| F3052_RS10780 () | 2243195..2243446 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| F3052_RS10785 () | 2243513..2243791 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| F3052_RS10790 () | 2243793..2244842 | + | 1050 | WP_001424248.1 | DUF968 domain-containing protein | - |
| F3052_RS10795 () | 2244856..2245608 | + | 753 | WP_001047136.1 | antitermination protein | - |
| F3052_RS10800 () | 2245886..2245975 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| F3052_RS10805 () | 2246030..2246242 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| F3052_RS10810 () | 2246543..2246758 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| F3052_RS10815 () | 2247512..2247727 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| F3052_RS10820 () | 2247732..2248043 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| F3052_RS10825 () | 2248040..2248573 | + | 534 | WP_097725176.1 | lysozyme | - |
| F3052_RS10830 () | 2248570..2249067 | + | 498 | WP_001071766.1 | DUF2514 domain-containing protein | - |
| F3052_RS10835 () | 2249430..2249642 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| F3052_RS10840 () | 2249653..2249841 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| F3052_RS10845 () | 2249844..2249909 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| F3052_RS10850 () | 2249989..2250144 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| F3052_RS10855 () | 2250262..2250959 | - | 698 | Protein_2123 | IS1 family transposase IS1A | Transposase |
| F3052_RS10860 () | 2251093..2251266 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| F3052_RS10865 () | 2251418..2251828 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| F3052_RS10870 () | 2251886..2252119 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| F3052_RS10875 () | 2252508..2253053 | + | 546 | WP_000453566.1 | DNA-packaging protein | - |
| F3052_RS10880 () | 2253028..2254953 | + | 1926 | WP_095785060.1 | phage terminase large subunit family protein | - |
| F3052_RS10885 () | 2254950..2255156 | + | 207 | WP_000198149.1 | gpW family protein | - |
| F3052_RS10890 () | 2255153..2256754 | + | 1602 | WP_001695573.1 | phage portal protein | - |
| F3052_RS10895 () | 2256735..2258054 | + | 1320 | WP_001563773.1 | S49 family peptidase | - |
| F3052_RS10900 () | 2258064..2258396 | + | 333 | WP_001338090.1 | head decoration protein | - |
| F3052_RS10905 () | 2258452..2259477 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| F3052_RS10910 () | 2259519..2259917 | + | 399 | WP_097725232.1 | DNA-packaging protein FI | - |
| F3052_RS10915 () | 2259929..2260282 | + | 354 | WP_000753006.1 | head-tail joining protein | - |
| F3052_RS10920 () | 2260294..2260872 | + | 579 | WP_000975081.1 | phage tail protein | - |
| F3052_RS10925 () | 2260869..2261264 | + | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| F3052_RS10930 () | 2261272..2262012 | + | 741 | WP_097725233.1 | phage tail protein | - |
| F3052_RS10935 () | 2262028..2262450 | + | 423 | WP_000479155.1 | phage minor tail protein G | - |
| F3052_RS10940 () | 2262432..2262866 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| F3052_RS10945 () | 2262859..2265420 | + | 2562 | WP_183311604.1 | phage tail tape measure protein | - |
| F3052_RS10950 () | 2265417..2265746 | + | 330 | WP_000847350.1 | phage tail protein | - |
| F3052_RS10955 () | 2265746..2266444 | + | 699 | WP_001152502.1 | phage minor tail protein L | - |
| F3052_RS10960 () | 2266450..2267193 | + | 744 | WP_089540525.1 | C40 family peptidase | - |
| F3052_RS10965 () | 2267130..2267762 | + | 633 | WP_141116377.1 | tail assembly protein | - |
| F3052_RS10970 () | 2267823..2271302 | + | 3480 | WP_183311605.1 | host specificity protein J | - |
| F3052_RS10975 () | 2271370..2271969 | + | 600 | WP_001233110.1 | hypothetical protein | VF |
| F3052_RS10980 () | 2272034..2275141 | + | 3108 | WP_000279160.1 | prophage tail fiber N-terminal domain-containing protein | - |
| F3052_RS10985 () | 2275141..2275716 | + | 576 | WP_000885595.1 | tail fiber assembly protein | - |
| F3052_RS10990 () | 2275814..2276404 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| F3052_RS10995 () | 2276721..2276954 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| F3052_RS11000 () | 2277023..2277136 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| F3052_RS11005 () | 2277738..2279021 | + | 1284 | Protein_2153 | MHS family MFS transporter YdfJ | - |
| F3052_RS11010 () | 2279110..2280570 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| F3052_RS11015 () | 2280605..2280808 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| F3052_RS11020 () | 2280985..2281671 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| F3052_RS11025 () | 2281760..2282506 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|