MGE detailed information
MGE type: Prophage MGE length: 58033 bp
Accession: NZ_CP047273 Location: 4076371..4134403 Organism: Citrobacter freundii strain N18-04078 Replicon: chromosome
Accession: NZ_CP047273 Location: 4076371..4134403 Organism: Citrobacter freundii strain N18-04078 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3085_RS19735 () | 4072378..4073748 | + | 1371 | WP_000345204.1 | sucrose-specific PTS transporter subunit IIBC | - |
| F3085_RS19740 () | 4073748..4075148 | + | 1401 | WP_003029589.1 | sucrose-6-phosphate hydrolase | - |
| F3085_RS19745 () | 4075178..4076182 | + | 1005 | WP_003029591.1 | LacI family DNA-binding transcriptional regulator | - |
| F3085_RS19750 () | 4076357..4076952 | - | 596 | Protein_3884 | IS3 family transposase IS911 | Transposase |
| F3085_RS19755 () | 4076962..4078113 | - | 1152 | WP_003029596.1 | IS30 family transposase IS30D | Transposase |
| F3085_RS19760 () | 4078181..4078438 | - | 258 | Protein_3886 | IS3 family transposase IS911 | Transposase |
| F3085_RS19765 () | 4078510..4079583 | - | 1074 | Protein_3887 | DEAD/DEAH box helicase family protein | - |
| F3085_RS19770 () | 4079583..4080488 | - | 906 | WP_032933065.1 | WYL domain-containing protein | - |
| F3085_RS19775 () | 4080944..4081807 | + | 864 | WP_003029608.1 | GTPase family protein | - |
| F3085_RS19780 () | 4081899..4082720 | + | 822 | WP_003029610.1 | DUF945 domain-containing protein | - |
| F3085_RS19785 () | 4082937..4083638 | + | 702 | WP_003029611.1 | WYL domain-containing protein | - |
| F3085_RS19790 () | 4083679..4083924 | + | 246 | WP_003029614.1 | hypothetical protein | - |
| F3085_RS19795 () | 4083914..4084354 | + | 441 | WP_003029616.1 | hypothetical protein | - |
| F3085_RS19800 () | 4084378..4084847 | + | 470 | Protein_3894 | hypothetical protein | - |
| F3085_RS19805 () | 4085453..4085803 | - | 351 | WP_003036925.1 | Morphinone reductase | - |
| F3085_RS19810 () | 4086079..4087356 | - | 1278 | WP_003036928.1 | DUF2254 domain-containing protein | - |
| F3085_RS19815 () | 4087421..4089418 | - | 1998 | WP_016245729.1 | choline BCCT transporter BetT | - |
| F3085_RS19820 () | 4089922..4090113 | + | 192 | Protein_3898 | DUF905 family protein | - |
| F3085_RS19825 () | 4090127..4090588 | + | 462 | WP_003031344.1 | antirestriction protein | - |
| F3085_RS19830 () | 4090604..4091080 | + | 477 | WP_003031345.1 | RadC family protein | - |
| F3085_RS19835 () | 4091089..4091310 | + | 222 | WP_003031346.1 | DUF987 domain-containing protein | - |
| F3085_RS19840 () | 4091328..4091645 | + | 318 | WP_003031347.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| F3085_RS19845 () | 4091666..4092007 | + | 342 | WP_003031349.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| F3085_RS19850 () | 4092597..4093088 | - | 492 | WP_121927018.1 | tail fiber assembly protein | - |
| F3085_RS19855 () | 4094209..4094652 | - | 444 | Protein_3905 | phage tail protein | - |
| F3085_RS19860 () | 4094652..4095332 | - | 681 | WP_121927014.1 | DUF2612 domain-containing protein | - |
| F3085_RS19865 () | 4095329..4096528 | - | 1200 | WP_121927013.1 | baseplate J/gp47 family protein | - |
| F3085_RS19870 () | 4096529..4096882 | - | 354 | WP_016239889.1 | hypothetical protein | - |
| F3085_RS19875 () | 4096882..4097622 | - | 741 | WP_108961687.1 | phage baseplate assembly protein V | - |
| F3085_RS19880 () | 4097838..4098188 | + | 351 | WP_047400359.1 | hypothetical protein | - |
| F3085_RS19885 () | 4098227..4098481 | - | 255 | Protein_3911 | hypothetical protein | - |
| F3085_RS19890 () | 4099118..4100185 | - | 1068 | WP_121927012.1 | hypothetical protein | - |
| F3085_RS19895 () | 4100188..4100493 | - | 306 | WP_001160174.1 | hypothetical protein | - |
| F3085_RS19900 () | 4100495..4101097 | - | 603 | WP_044702575.1 | hypothetical protein | - |
| F3085_RS19905 () | 4101097..4103100 | - | 2004 | WP_044702576.1 | hypothetical protein | - |
| F3085_RS19910 () | 4103278..4103703 | - | 426 | WP_000393957.1 | hypothetical protein | - |
| F3085_RS19915 () | 4103707..4104147 | - | 441 | WP_000257257.1 | DUF3277 family protein | - |
| F3085_RS19920 () | 4104158..4105318 | - | 1161 | WP_121927011.1 | DUF3383 domain-containing protein | - |
| F3085_RS19925 () | 4105322..4105885 | - | 564 | WP_044702578.1 | hypothetical protein | - |
| F3085_RS19930 () | 4105860..4106249 | - | 390 | WP_044702579.1 | hypothetical protein | - |
| F3085_RS19935 () | 4106236..4106790 | - | 555 | WP_121927010.1 | hypothetical protein | - |
| F3085_RS19940 () | 4106787..4107194 | - | 408 | WP_044702581.1 | DUF4054 domain-containing protein | - |
| F3085_RS19945 () | 4107160..4107549 | - | 390 | WP_006120171.1 | hypothetical protein | - |
| F3085_RS19950 () | 4107591..4108532 | - | 942 | WP_121927009.1 | DUF2184 domain-containing protein | - |
| F3085_RS19955 () | 4108544..4109047 | - | 504 | WP_006120173.1 | hypothetical protein | - |
| F3085_RS19960 () | 4109052..4110284 | - | 1233 | WP_121927008.1 | DUF2213 domain-containing protein | - |
| F3085_RS19965 () | 4110299..4111036 | - | 738 | WP_000224761.1 | minor capsid protein | - |
| F3085_RS19970 () | 4110921..4112390 | - | 1470 | WP_121927007.1 | DUF1073 domain-containing protein | - |
| F3085_RS19975 () | 4112390..4114012 | - | 1623 | WP_063217301.1 | TerL protein | - |
| F3085_RS19980 () | 4114015..4114488 | - | 474 | WP_000729396.1 | DUF2280 domain-containing protein | - |
| F3085_RS19985 () | 4114520..4115140 | - | 621 | WP_045356282.1 | hypothetical protein | - |
| F3085_RS19990 () | 4115195..4115380 | - | 186 | WP_021241734.1 | hypothetical protein | - |
| F3085_RS19995 () | 4115524..4115916 | - | 393 | WP_121927005.1 | DUF2570 domain-containing protein | - |
| F3085_RS20000 () | 4115913..4116527 | - | 615 | WP_121927004.1 | glycoside hydrolase family 19 protein | - |
| F3085_RS20005 () | 4116524..4116856 | - | 333 | WP_021241738.1 | phage holin, lambda family | - |
| F3085_RS20010 () | 4116931..4117544 | - | 614 | Protein_3936 | hypothetical protein | - |
| F3085_RS20015 () | 4117450..4118391 | - | 942 | WP_121927003.1 | hypothetical protein | - |
| F3085_RS20020 () | 4118385..4118936 | - | 552 | WP_121927002.1 | hypothetical protein | - |
| F3085_RS20025 () | 4119079..4119762 | - | 684 | WP_121927001.1 | hypothetical protein | - |
| F3085_RS20030 () | 4119759..4120118 | - | 360 | WP_121927000.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F3085_RS20035 () | 4120115..4120414 | - | 300 | WP_001245609.1 | DUF1364 family protein | - |
| F3085_RS20040 () | 4120404..4120856 | - | 453 | WP_121926999.1 | recombination protein NinB | - |
| F3085_RS20045 () | 4121098..4121436 | - | 339 | WP_121926998.1 | hypothetical protein | - |
| F3085_RS20050 () | 4121429..4122274 | - | 846 | WP_121926997.1 | DUF550 domain-containing protein | - |
| F3085_RS20055 () | 4122274..4122774 | - | 501 | WP_164846310.1 | hypothetical protein | - |
| F3085_RS20060 () | 4122771..4123109 | - | 339 | Protein_3946 | ead/Ea22-like family protein | - |
| F3085_RS20065 () | 4123247..4123537 | - | 291 | WP_121926996.1 | DUF4406 domain-containing protein | - |
| F3085_RS20070 () | 4123537..4124934 | - | 1398 | WP_021241753.1 | AAA family ATPase | - |
| F3085_RS20075 () | 4124931..4125821 | - | 891 | WP_103849087.1 | replication protein | - |
| F3085_RS20080 () | 4125808..4125972 | - | 165 | WP_021241755.1 | hypothetical protein | - |
| F3085_RS20085 () | 4126051..4126203 | - | 153 | WP_000278093.1 | hypothetical protein | - |
| F3085_RS20090 () | 4126308..4126628 | - | 321 | WP_103849086.1 | hypothetical protein | - |
| F3085_RS20095 () | 4126670..4126903 | - | 234 | WP_000795144.1 | helix-turn-helix domain-containing protein | - |
| F3085_RS20100 () | 4127032..4127724 | + | 693 | WP_044702929.1 | helix-turn-helix transcriptional regulator | - |
| F3085_RS20105 () | 4127987..4128187 | + | 201 | WP_021241757.1 | hypothetical protein | - |
| F3085_RS20110 () | 4128187..4128384 | + | 198 | WP_000501155.1 | DUF1482 family protein | - |
| F3085_RS20115 () | 4128395..4128667 | + | 273 | WP_121926995.1 | hypothetical protein | - |
| F3085_RS20120 () | 4128750..4129385 | + | 636 | WP_183274479.1 | hypothetical protein | - |
| F3085_RS20125 () | 4129439..4129603 | + | 165 | WP_021242892.1 | hypothetical protein | - |
| F3085_RS20130 () | 4129587..4130258 | + | 672 | WP_019076110.1 | exodeoxyribonuclease X | - |
| F3085_RS20135 () | 4130258..4130926 | + | 669 | WP_019076109.1 | AAA family ATPase | - |
| F3085_RS20140 () | 4130943..4131674 | + | 732 | WP_121926993.1 | hypothetical protein | - |
| F3085_RS20145 () | 4131671..4131829 | + | 159 | WP_019076107.1 | DUF1317 family protein | - |
| F3085_RS20150 () | 4131880..4132731 | + | 852 | WP_121927015.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| F3085_RS20155 () | 4132734..4132973 | + | 240 | WP_029139424.1 | DUF4060 family protein | - |
| F3085_RS20160 () | 4133016..4133348 | + | 333 | Protein_3966 | helix-turn-helix domain-containing protein | - |
| F3085_RS20165 () | 4133240..4134403 | + | 1164 | WP_019076103.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| F3085_RS20175 () | 4134658..4135122 | - | 465 | WP_044702482.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| F3085_RS20180 () | 4135314..4136762 | - | 1449 | WP_044702495.1 | EAL domain-containing protein | - |
| F3085_RS20185 () | 4137104..4137577 | - | 474 | WP_044702484.1 | hypothetical protein | - |
| F3085_RS20190 () | 4137552..4138283 | - | 732 | WP_044702485.1 | winged helix-turn-helix domain-containing protein | - |
| F3085_RS20195 () | 4138428..4139123 | - | 696 | WP_003031358.1 | molecular chaperone | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|