MGE detailed information
MGE type: Prophage MGE length: 84910 bp
Accession: NZ_CP047273 Location: 2121148..2206057 Organism: Citrobacter freundii strain N18-04078 Replicon: chromosome
Accession: NZ_CP047273 Location: 2121148..2206057 Organism: Citrobacter freundii strain N18-04078 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3085_RS10090 () | 2116640..2117206 | + | 567 | WP_003034677.1 | VOC family protein | - |
| F3085_RS10095 () | 2117209..2117955 | + | 747 | WP_044701481.1 | copper homeostasis protein CutC | - |
| F3085_RS10100 () | 2118199..2119167 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| F3085_RS10105 () | 2119164..2119907 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| F3085_RS10110 () | 2119948..2120343 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| F3085_RS10115 () | 2120396..2121169 | - | 774 | WP_044701478.1 | DUF72 domain-containing protein | - |
| F3085_RS10120 () | 2121148..2122461 | - | 1314 | WP_044701477.1 | Putative defective protein IntQ ; Integrase | Integrase |
| F3085_RS10125 () | 2122520..2122756 | - | 237 | WP_003034696.1 | excisionase family protein | - |
| F3085_RS10130 () | 2122802..2122951 | - | 150 | WP_165366945.1 | hypothetical protein | - |
| F3085_RS10135 () | 2123293..2123739 | - | 447 | Protein_1984 | DUF550 domain-containing protein | - |
| F3085_RS10140 () | 2123736..2124029 | - | 294 | WP_044701466.1 | hypothetical protein | - |
| F3085_RS10145 () | 2124033..2124428 | - | 396 | WP_044701465.1 | hypothetical protein | - |
| F3085_RS10150 () | 2124425..2124739 | - | 315 | WP_044701462.1 | hypothetical protein | - |
| F3085_RS10155 () | 2124862..2125041 | - | 180 | Protein_1988 | hypothetical protein | - |
| F3085_RS10160 () | 2125027..2125299 | - | 273 | Protein_1989 | hypothetical protein | - |
| F3085_RS10165 () | 2125283..2126323 | - | 1041 | WP_046155140.1 | chromosome partitioning protein ParB | - |
| F3085_RS10170 () | 2126323..2126736 | - | 414 | WP_044703074.1 | hypothetical protein | - |
| F3085_RS10180 () | 2127281..2127736 | + | 456 | WP_044702982.1 | hypothetical protein | - |
| F3085_RS10185 () | 2128192..2128911 | - | 720 | WP_032140310.1 | helix-turn-helix transcriptional regulator | - |
| F3085_RS10190 () | 2128981..2129238 | + | 258 | WP_024195799.1 | helix-turn-helix domain-containing protein | - |
| F3085_RS10195 () | 2129270..2129833 | + | 564 | WP_016240141.1 | hypothetical protein | - |
| F3085_RS10200 () | 2130009..2130188 | + | 180 | Protein_1996 | DUF4222 domain-containing protein | - |
| F3085_RS10205 () | 2130178..2131053 | + | 876 | WP_044702980.1 | conserved phage C-terminal domain-containing protein | - |
| F3085_RS10210 () | 2131056..2131877 | + | 822 | WP_044702979.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| F3085_RS10215 () | 2131874..2132092 | + | 219 | WP_044702978.1 | hypothetical protein | - |
| F3085_RS10220 () | 2132089..2132409 | + | 321 | WP_044702977.1 | LexA family transcriptional regulator | - |
| F3085_RS10225 () | 2132406..2132792 | + | 387 | WP_044702975.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F3085_RS10230 () | 2132805..2133530 | + | 726 | WP_044702973.1 | DNA-binding protein | - |
| F3085_RS10235 () | 2133527..2134516 | + | 990 | WP_046155141.1 | DUF968 domain-containing protein | - |
| F3085_RS10240 () | 2134531..2135109 | + | 579 | WP_044703009.1 | DUF1133 family protein | - |
| F3085_RS10245 () | 2135706..2136284 | + | 579 | WP_044703006.1 | hypothetical protein | - |
| F3085_RS10250 () | 2136384..2136779 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| F3085_RS10255 () | 2136766..2137047 | + | 282 | WP_046155109.1 | phage holin family protein | - |
| F3085_RS10260 () | 2137047..2137664 | + | 618 | WP_044703002.1 | glycoside hydrolase family 19 protein | - |
| F3085_RS10265 () | 2137672..2137941 | + | 270 | WP_047715857.1 | hypothetical protein | - |
| F3085_RS10270 () | 2138129..2138422 | + | 294 | WP_080941989.1 | hypothetical protein | - |
| F3085_RS10275 () | 2138492..2138728 | + | 237 | WP_044702996.1 | hypothetical protein | - |
| F3085_RS10280 () | 2138920..2139444 | + | 525 | WP_044702995.1 | Rha family transcriptional regulator | - |
| F3085_RS10285 () | 2139523..2140032 | + | 510 | WP_044703079.1 | hypothetical protein | - |
| F3085_RS10290 () | 2140511..2140714 | + | 204 | WP_044703081.1 | hypothetical protein | - |
| F3085_RS10295 () | 2140878..2141255 | + | 378 | WP_042922212.1 | IS66 family transposase ISCfr14 | Transposase |
| F3085_RS10300 () | 2141255..2141602 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| F3085_RS10305 () | 2141652..2143190 | + | 1539 | WP_042922208.1 | IS66 family transposase ISSgsp1 | Transposase |
| F3085_RS10310 () | 2143415..2143903 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| F3085_RS10315 () | 2143903..2146005 | + | 2103 | WP_044700358.1 | phage terminase large subunit family protein | - |
| F3085_RS10320 () | 2146002..2146217 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| F3085_RS10325 () | 2146214..2147722 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| F3085_RS10330 () | 2147667..2149691 | + | 2025 | WP_044700356.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| F3085_RS10335 () | 2149783..2150109 | + | 327 | WP_044700364.1 | DUF2190 family protein | - |
| F3085_RS10340 () | 2150102..2150377 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| F3085_RS10345 () | 2150388..2150966 | + | 579 | WP_044700352.1 | phage tail protein | - |
| F3085_RS10350 () | 2150963..2151364 | + | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| F3085_RS10355 () | 2151374..2152117 | + | 744 | WP_044700348.1 | phage tail protein | - |
| F3085_RS10360 () | 2152128..2152559 | + | 432 | WP_044700346.1 | phage minor tail protein G | - |
| F3085_RS10365 () | 2152568..2152882 | + | 315 | WP_072052167.1 | phage tail assembly protein T | - |
| F3085_RS10370 () | 2152866..2156009 | + | 3144 | WP_044700344.1 | phage tail tape measure protein | - |
| F3085_RS10375 () | 2156013..2156360 | + | 348 | WP_044700341.1 | phage tail protein | - |
| F3085_RS10380 () | 2156357..2157112 | + | 756 | WP_044700338.1 | phage minor tail protein L | - |
| F3085_RS10385 () | 2157114..2157824 | + | 711 | WP_044700337.1 | C40 family peptidase | - |
| F3085_RS10390 () | 2157854..2157997 | + | 144 | WP_183273585.1 | hypothetical protein | - |
| F3085_RS10395 () | 2158246..2158848 | + | 603 | WP_044700334.1 | tail assembly protein | - |
| F3085_RS10400 () | 2158878..2162063 | + | 3186 | WP_044700333.1 | host specificity protein J | - |
| F3085_RS10405 () | 2162063..2162377 | + | 315 | WP_044700331.1 | hypothetical protein | - |
| F3085_RS10410 () | 2162378..2163052 | + | 675 | WP_046155111.1 | hypothetical protein | - |
| F3085_RS10415 () | 2163460..2164533 | + | 1074 | WP_046155112.1 | tail fiber domain-containing protein | - |
| F3085_RS10420 () | 2164601..2164843 | - | 243 | WP_038642073.1 | DinI family protein | - |
| F3085_RS10425 () | 2164922..2165311 | + | 390 | WP_044700305.1 | DNA polymerase V | - |
| F3085_RS10430 () | 2165312..2165980 | - | 669 | WP_044700303.1 | SOS response-associated peptidase | - |
| F3085_RS10435 () | 2166303..2166869 | - | 567 | WP_044700301.1 | hydrolase | - |
| F3085_RS10440 () | 2167158..2168930 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| F3085_RS10445 () | 2168932..2169375 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| F3085_RS10450 () | 2169404..2170147 | + | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| F3085_RS10455 () | 2170182..2170703 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F3085_RS10460 () | 2170784..2171395 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| F3085_RS10465 () | 2171404..2172414 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| F3085_RS10470 () | 2172493..2173278 | - | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| F3085_RS10475 () | 2173275..2174030 | - | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| F3085_RS10480 () | 2174109..2175053 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| F3085_RS10485 () | 2175069..2176388 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| F3085_RS10490 () | 2176508..2177479 | + | 972 | WP_032935377.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F3085_RS10495 () | 2177524..2178966 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| F3085_RS10500 () | 2179085..2179954 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| F3085_RS10505 () | 2180322..2181797 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| F3085_RS10510 () | 2182031..2183842 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| F3085_RS10515 () | 2183877..2184518 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F3085_RS10520 () | 2184586..2185764 | - | 1179 | WP_044700298.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F3085_RS10525 () | 2185896..2186186 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| F3085_RS10530 () | 2186308..2186661 | + | 354 | WP_003034909.1 | protein YebF | - |
| F3085_RS10535 () | 2186756..2187415 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| F3085_RS10540 () | 2187502..2189556 | + | 2055 | WP_170864029.1 | oligopeptidase B | - |
| F3085_RS10545 () | 2189547..2190209 | - | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| F3085_RS10550 () | 2190233..2190889 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| F3085_RS10555 () | 2190996..2191226 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| F3085_RS10560 () | 2191375..2193126 | + | 1752 | WP_019076528.1 | hypothetical protein ; Integrase | Integrase |
| F3085_RS10565 () | 2193571..2194263 | + | 693 | WP_071684717.1 | inovirus-type Gp2 protein | - |
| F3085_RS10570 () | 2194577..2195155 | - | 579 | WP_071684716.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| F3085_RS10575 () | 2195509..2196411 | - | 903 | WP_003844140.1 | diguanylate cyclase | - |
| F3085_RS10580 () | 2196731..2196922 | - | 192 | WP_008322661.1 | hypothetical protein | - |
| F3085_RS10585 () | 2197415..2198002 | - | 588 | WP_106107223.1 | hypothetical protein | - |
| F3085_RS10590 () | 2198628..2199002 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| F3085_RS10595 () | 2199006..2199878 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| F3085_RS10600 () | 2199899..2200237 | + | 339 | WP_044700293.1 | YebY family protein | - |
| - () | 2200358..2200501 | - | 144 | - | - | Antitoxin Detail |
| - () | 2200393..2200496 | + | 104 | - | - | Toxin Detail |
| F3085_RS10605 () | 2200650..2201291 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| F3085_RS10610 () | 2201292..2201483 | - | 192 | WP_003034941.1 | YebW family protein | - |
| F3085_RS10615 () | 2201586..2201822 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| F3085_RS10620 () | 2201923..2203311 | - | 1389 | WP_044700319.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F3085_RS10625 () | 2203424..2206057 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| F3085_RS10630 () | 2206026..2207309 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| F3085_RS10635 () | 2207438..2207935 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| F3085_RS10640 () | 2208032..2208718 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| F3085_RS10645 () | 2208738..2210786 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|