MGE detailed information
MGE type: Prophage MGE length: 87571 bp
Accession: NZ_CP047269 Location: 2151730..2239300 Organism: Citrobacter freundii strain N16-03880 Replicon: chromosome
Accession: NZ_CP047269 Location: 2151730..2239300 Organism: Citrobacter freundii strain N16-03880 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3114_RS10310 () | 2147222..2147788 | + | 567 | WP_003034677.1 | VOC family protein | - |
| F3114_RS10315 () | 2147791..2148537 | + | 747 | WP_044701481.1 | copper homeostasis protein CutC | - |
| F3114_RS10320 () | 2148781..2149749 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| F3114_RS10325 () | 2149746..2150489 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| F3114_RS10330 () | 2150530..2150925 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| F3114_RS10335 () | 2150978..2151751 | - | 774 | WP_044701478.1 | DUF72 domain-containing protein | - |
| F3114_RS10340 () | 2151730..2153043 | - | 1314 | WP_044701477.1 | hypothetical protein ; Integrase | Integrase |
| F3114_RS10345 () | 2153102..2153338 | - | 237 | WP_003034696.1 | excisionase family protein | - |
| F3114_RS10350 () | 2153403..2153780 | - | 378 | WP_127702269.1 | hypothetical protein | - |
| F3114_RS10355 () | 2153875..2154321 | - | 447 | Protein_2026 | DUF550 domain-containing protein | - |
| F3114_RS10360 () | 2154318..2154611 | - | 294 | WP_044701466.1 | hypothetical protein | - |
| F3114_RS10365 () | 2154615..2155010 | - | 396 | WP_044701465.1 | hypothetical protein | - |
| F3114_RS10370 () | 2155007..2155321 | - | 315 | WP_044701462.1 | hypothetical protein | - |
| F3114_RS10375 () | 2155444..2155623 | - | 180 | Protein_2030 | hypothetical protein | - |
| F3114_RS10380 () | 2155609..2155881 | - | 273 | Protein_2031 | hypothetical protein | - |
| F3114_RS10385 () | 2155865..2156905 | - | 1041 | WP_046155140.1 | chromosome partitioning protein ParB | - |
| F3114_RS10390 () | 2156905..2157318 | - | 414 | WP_044703074.1 | hypothetical protein | - |
| F3114_RS10400 () | 2157863..2158318 | + | 456 | WP_044702982.1 | hypothetical protein | - |
| F3114_RS10405 () | 2158774..2159493 | - | 720 | WP_032140310.1 | helix-turn-helix transcriptional regulator | - |
| F3114_RS10410 () | 2159563..2159820 | + | 258 | WP_024195799.1 | helix-turn-helix domain-containing protein | - |
| F3114_RS10415 () | 2159852..2160415 | + | 564 | WP_016240141.1 | hypothetical protein | - |
| F3114_RS10420 () | 2160591..2160770 | + | 180 | Protein_2038 | DUF4222 domain-containing protein | - |
| F3114_RS10425 () | 2160760..2161635 | + | 876 | WP_044702980.1 | conserved phage C-terminal domain-containing protein | - |
| F3114_RS10430 () | 2161638..2162459 | + | 822 | WP_044702979.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| F3114_RS10435 () | 2162456..2162674 | + | 219 | WP_044702978.1 | hypothetical protein | - |
| F3114_RS10440 () | 2162671..2162991 | + | 321 | WP_044702977.1 | LexA family transcriptional regulator | - |
| F3114_RS10445 () | 2162988..2163374 | + | 387 | WP_044702975.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F3114_RS10450 () | 2163387..2164112 | + | 726 | WP_044702973.1 | DNA-binding protein | - |
| F3114_RS10455 () | 2164109..2165098 | + | 990 | WP_046155141.1 | DUF968 domain-containing protein | - |
| F3114_RS10460 () | 2165113..2165691 | + | 579 | WP_044703009.1 | DUF1133 family protein | - |
| F3114_RS10465 () | 2166288..2166866 | + | 579 | WP_044703006.1 | hypothetical protein | - |
| F3114_RS10470 () | 2166966..2167361 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| F3114_RS10475 () | 2167348..2167629 | + | 282 | WP_046155109.1 | phage holin family protein | - |
| F3114_RS10480 () | 2167629..2168246 | + | 618 | WP_044703002.1 | glycoside hydrolase family 19 protein | - |
| F3114_RS10485 () | 2168254..2168523 | + | 270 | WP_047715857.1 | hypothetical protein | - |
| F3114_RS10490 () | 2168711..2169004 | + | 294 | WP_080941989.1 | hypothetical protein | - |
| F3114_RS10495 () | 2169074..2169310 | + | 237 | WP_044702996.1 | hypothetical protein | - |
| F3114_RS10500 () | 2169502..2170026 | + | 525 | WP_044702995.1 | Rha family transcriptional regulator | - |
| F3114_RS10505 () | 2170105..2170614 | + | 510 | WP_044703079.1 | hypothetical protein | - |
| F3114_RS10510 () | 2171093..2171296 | + | 204 | WP_044703081.1 | hypothetical protein | - |
| F3114_RS10515 () | 2171460..2171837 | + | 378 | WP_042922212.1 | IS66 family transposase ISCfr14 | Transposase |
| F3114_RS10520 () | 2171837..2172184 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| F3114_RS10525 () | 2172234..2173772 | + | 1539 | WP_042922208.1 | IS66 family transposase ISSgsp1 | Transposase |
| F3114_RS10530 () | 2173997..2174485 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| F3114_RS10535 () | 2174485..2176587 | + | 2103 | WP_044700358.1 | phage terminase large subunit family protein | - |
| F3114_RS10540 () | 2176584..2176799 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| F3114_RS10545 () | 2176796..2178304 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| F3114_RS10550 () | 2178249..2180273 | + | 2025 | WP_044700356.1 | Dihydrofolate synthase/folylpolyglutamate synthase | VF |
| F3114_RS10555 () | 2180365..2180691 | + | 327 | WP_044700364.1 | DUF2190 family protein | - |
| F3114_RS10560 () | 2180684..2180959 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| F3114_RS10565 () | 2180970..2181548 | + | 579 | WP_044700352.1 | phage tail protein | - |
| F3114_RS10570 () | 2181545..2181946 | + | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| F3114_RS10575 () | 2181956..2182699 | + | 744 | WP_044700348.1 | phage tail protein | - |
| F3114_RS10580 () | 2182710..2183141 | + | 432 | WP_044700346.1 | phage minor tail protein G | - |
| F3114_RS10585 () | 2183150..2183464 | + | 315 | WP_072052167.1 | phage tail assembly protein T | - |
| F3114_RS10590 () | 2183448..2186591 | + | 3144 | WP_044700344.1 | phage tail tape measure protein | - |
| F3114_RS10595 () | 2186595..2186942 | + | 348 | WP_044700341.1 | phage tail protein | - |
| F3114_RS10600 () | 2186939..2187694 | + | 756 | WP_044700338.1 | phage minor tail protein L | - |
| F3114_RS10605 () | 2187696..2188406 | + | 711 | WP_044700337.1 | C40 family peptidase | - |
| F3114_RS10610 () | 2188436..2188579 | + | 144 | WP_183273585.1 | hypothetical protein | - |
| F3114_RS10615 () | 2188828..2189430 | + | 603 | WP_044700334.1 | tail assembly protein | - |
| F3114_RS10620 () | 2189460..2192645 | + | 3186 | WP_044700333.1 | host specificity protein J | - |
| F3114_RS10625 () | 2192645..2192959 | + | 315 | WP_044700331.1 | hypothetical protein | - |
| F3114_RS10630 () | 2192960..2193634 | + | 675 | WP_046155111.1 | hypothetical protein | - |
| F3114_RS10635 () | 2193744..2193983 | + | 240 | WP_071681336.1 | cor protein | - |
| F3114_RS10640 () | 2194042..2195115 | + | 1074 | WP_191029493.1 | tail fiber domain-containing protein | - |
| F3114_RS10645 () | 2195183..2195425 | - | 243 | WP_038642073.1 | DinI family protein | - |
| F3114_RS10650 () | 2195504..2195893 | + | 390 | WP_044700305.1 | DNA polymerase V | - |
| F3114_RS10655 () | 2195894..2196562 | - | 669 | WP_044700303.1 | SOS response-associated peptidase | - |
| F3114_RS10660 () | 2196885..2197451 | - | 567 | WP_044700301.1 | hydrolase | - |
| F3114_RS10665 () | 2197740..2199512 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| F3114_RS10670 () | 2199514..2199957 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| F3114_RS10675 () | 2199986..2200729 | + | 744 | WP_003034865.1 | Hydroxyacylglutathione hydrolase | VF |
| F3114_RS10680 () | 2200764..2201285 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F3114_RS10685 () | 2201366..2201977 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| F3114_RS10690 () | 2201986..2202996 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| F3114_RS10695 () | 2203075..2203860 | - | 786 | WP_003034874.1 | tRNA pseudouridine synthase A | VF |
| F3114_RS10700 () | 2203857..2204612 | - | 756 | WP_003034877.1 | N-(5'-phosphoribosyl)anthranilate isomerase | VF |
| F3114_RS10705 () | 2204691..2205635 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| F3114_RS10710 () | 2205651..2206970 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| F3114_RS10715 () | 2207090..2208061 | + | 972 | WP_032935377.1 | Glutamine--tRNA ligase | VF |
| F3114_RS10720 () | 2208106..2209548 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| F3114_RS10725 () | 2209667..2210536 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| F3114_RS10730 () | 2210904..2212379 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| F3114_RS10735 () | 2212613..2214424 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| F3114_RS10740 () | 2214459..2215100 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F3114_RS10745 () | 2215168..2216346 | - | 1179 | WP_044700298.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F3114_RS10750 () | 2216478..2216768 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| F3114_RS10755 () | 2216890..2217243 | + | 354 | WP_003034909.1 | protein YebF | - |
| F3114_RS10760 () | 2217338..2217997 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| F3114_RS10765 () | 2218084..2220138 | + | 2055 | WP_170864029.1 | oligopeptidase B | - |
| F3114_RS10770 () | 2220129..2220791 | - | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| F3114_RS10775 () | 2220815..2221471 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| F3114_RS10780 () | 2221578..2221808 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| F3114_RS10785 () | 2221957..2223708 | + | 1752 | WP_019076528.1 | hypothetical protein ; Integrase | Integrase |
| F3114_RS10790 () | 2224153..2224845 | + | 693 | WP_071684717.1 | inovirus-type Gp2 protein | - |
| F3114_RS10795 () | 2225159..2225737 | - | 579 | WP_071684716.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| F3114_RS10800 () | 2226091..2226993 | - | 903 | WP_003844140.1 | diguanylate cyclase | - |
| F3114_RS10805 () | 2227313..2227504 | - | 192 | WP_008322661.1 | hypothetical protein | - |
| F3114_RS10810 () | 2227997..2228584 | - | 588 | WP_106107223.1 | hypothetical protein | - |
| F3114_RS10815 () | 2229210..2229584 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| F3114_RS10820 () | 2229588..2230460 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| F3114_RS10825 () | 2230481..2230819 | + | 339 | WP_044700293.1 | YebY family protein | - |
| - () | 2230940..2231083 | - | 144 | - | - | Antitoxin Detail |
| - () | 2230975..2231078 | + | 104 | - | - | Toxin Detail |
| F3114_RS10830 () | 2231232..2231873 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| F3114_RS10835 () | 2231874..2232065 | - | 192 | WP_003034941.1 | YebW family protein | - |
| F3114_RS10840 () | 2232168..2232404 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| F3114_RS10845 () | 2232505..2233893 | - | 1389 | WP_044700319.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F3114_RS10850 () | 2234006..2236639 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| F3114_RS10855 () | 2236608..2237891 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| F3114_RS10860 () | 2238020..2238517 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| F3114_RS10865 () | 2238614..2239300 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| F3114_RS10870 () | 2239320..2241368 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| F3114_RS10875 () | 2241561..2242442 | + | 882 | WP_003034964.1 | protease HtpX | - |
| F3114_RS10880 () | 2242541..2243578 | - | 1038 | WP_127702267.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|