MGE detailed information
MGE type: Genomic_island MGE length: 29393 bp
Accession: NZ_CP047267 Location: 5454550..5483942 Organism: Pseudomonas syringae UB303 Replicon: chromosome
Accession: NZ_CP047267 Location: 5454550..5483942 Organism: Pseudomonas syringae UB303 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N026_RS24460 () | 5450470..5452956 | + | 2487 | WP_024659824.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| N026_RS24470 () | 5453176..5454249 | + | 1074 | WP_024659915.1 | site-specific integrase | - |
| N026_RS24475 () | 5454550..5454768 | + | 219 | WP_003316232.1 | hypothetical protein | - |
| N026_RS24480 () | 5454890..5455615 | + | 726 | WP_050586792.1 | hypothetical protein | - |
| N026_RS24485 () | 5455682..5455960 | + | 279 | WP_032624884.1 | hypothetical protein | - |
| N026_RS24490 () | 5456253..5456627 | + | 375 | WP_024659913.1 | conjugal transfer transcriptional regulator TraJ | - |
| N026_RS24495 () | 5456668..5457423 | + | 756 | WP_024659912.1 | P-type conjugative transfer protein TrbJ | - |
| N026_RS24500 () | 5457627..5459012 | + | 1386 | WP_024659911.1 | P-type conjugative transfer protein TrbL | - |
| N026_RS24505 () | 5459080..5459295 | + | 216 | WP_080267583.1 | hypothetical protein | - |
| N026_RS24510 () | 5460664..5461734 | + | 1071 | WP_159372330.1 | RHS repeat protein | - |
| N026_RS24515 () | 5461761..5461955 | + | 195 | WP_032625560.1 | hypothetical protein | - |
| N026_RS24520 () | 5462129..5463445 | + | 1317 | WP_159372331.1 | hypothetical protein | VF |
| N026_RS24525 () | 5463442..5465847 | + | 2406 | Protein_4651 | RHS repeat-associated core domain-containing protein | - |
| N026_RS24530 () | 5466275..5466556 | + | 282 | WP_024659440.1 | hypothetical protein | - |
| N026_RS24535 () | 5466969..5468237 | + | 1269 | WP_159372332.1 | RHS repeat protein | - |
| N026_RS24540 () | 5468264..5468431 | + | 168 | WP_159372314.1 | hypothetical protein | - |
| N026_RS24545 () | 5468923..5470086 | + | 1164 | WP_080267540.1 | RHS repeat protein | - |
| N026_RS24550 () | 5470083..5472848 | + | 2766 | WP_201279924.1 | RHS repeat protein | - |
| N026_RS24555 () | 5472845..5473252 | + | 408 | WP_024659445.1 | hypothetical protein | - |
| N026_RS24560 () | 5473450..5473854 | + | 405 | WP_024659446.1 | DUF4279 domain-containing protein | - |
| N026_RS24565 () | 5473960..5474310 | - | 351 | WP_024659447.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N026_RS24570 () | 5474323..5474571 | - | 249 | WP_011152898.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N026_RS24575 () | 5474946..5475863 | + | 918 | Protein_4661 | Tyrosine recombinase XerC | VF |
| N026_RS24580 () | 5475982..5476296 | - | 315 | WP_024659449.1 | hypothetical protein | - |
| N026_RS24585 () | 5476351..5477271 | - | 921 | WP_024659450.1 | hypothetical protein | - |
| N026_RS24590 () | 5477312..5477683 | - | 372 | WP_145958166.1 | hypothetical protein | - |
| N026_RS24595 () | 5477710..5477964 | - | 255 | WP_024659451.1 | hypothetical protein | - |
| N026_RS24600 () | 5478124..5478384 | - | 261 | WP_024659452.1 | hypothetical protein | - |
| N026_RS24605 () | 5478504..5478752 | - | 249 | WP_024659453.1 | hypothetical protein | - |
| N026_RS24610 () | 5478824..5479015 | - | 192 | WP_050586783.1 | antirestriction protein ArdR | - |
| N026_RS24615 () | 5479108..5480058 | - | 951 | WP_024659454.1 | hypothetical protein | - |
| N026_RS24620 () | 5480077..5480631 | - | 555 | WP_024659455.1 | hypothetical protein | - |
| N026_RS24625 () | 5480825..5481130 | - | 306 | WP_024659456.1 | hypothetical protein | - |
| N026_RS24630 () | 5481211..5481444 | - | 234 | WP_024659457.1 | hypothetical protein | - |
| N026_RS24635 () | 5481477..5481704 | - | 228 | WP_024659458.1 | hypothetical protein | - |
| N026_RS24640 () | 5481820..5482485 | - | 666 | WP_024659459.1 | hypothetical protein | - |
| N026_RS24645 () | 5482496..5482861 | - | 366 | WP_024659460.1 | hypothetical protein | - |
| N026_RS24650 () | 5483262..5483942 | - | 681 | WP_032624596.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N026_RS24655 () | 5484707..5485213 | - | 507 | WP_024659909.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| N026_RS24660 () | 5485653..5486468 | + | 816 | WP_024659908.1 | formate/nitrite transporter family protein | - |
| N026_RS24665 () | 5486665..5487168 | - | 504 | WP_024659907.1 | GNAT family N-acetyltransferase | - |
| N026_RS24670 () | 5487182..5488477 | - | 1296 | WP_024659906.1 | M20 family metallopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|