MGE detailed information
MGE type: Conjugative plasmid MGE length: 46546 bp
Accession: NZ_CP047262 Location: 1..46546 Organism: Pseudomonas syringae pv. maculicola str. ES4326 Replicon: plasmid pPma4326A
Accession: NZ_CP047262 Location: 1..46546 Organism: Pseudomonas syringae pv. maculicola str. ES4326 Replicon: plasmid pPma4326A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PMA4326_RS30155 () | 1..1311 | + | 1311 | WP_011178571.1 | replication initiation protein | - |
| PMA4326_RS30160 () | 1514..1801 | + | 288 | WP_004667956.1 | HU family DNA-binding protein | - |
| PMA4326_RS30165 () | 2630..3091 | + | 462 | WP_007253323.1 | DUF4113 domain-containing protein | - |
| PMA4326_RS30170 () | 3427..3897 | - | 471 | WP_007253324.1 | hypothetical protein | - |
| PMA4326_RS30175 () | 4826..5314 | + | 489 | Protein_4 | hypothetical protein | - |
| PMA4326_RS30180 () | 5945..6127 | + | 183 | WP_007253326.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PMA4326_RS30185 () | 6160..6585 | + | 426 | WP_005622461.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PMA4326_RS30190 () | 7102..7464 | + | 363 | WP_007253327.1 | hypothetical protein | - |
| PMA4326_RS30195 () | 7637..8799 | + | 1163 | WP_086004200.1 | IS3 family transposase ISPsy24 | Transposase |
| PMA4326_RS30200 () | 9338..9541 | - | 204 | WP_011178574.1 | hypothetical protein | - |
| PMA4326_RS30205 () | 9618..10637 | - | 1020 | WP_099982888.1 | hypothetical protein | - |
| PMA4326_RS30210 () | 10653..11647 | - | 995 | Protein_11 | hypothetical protein | - |
| PMA4326_RS30215 () | 11795..12436 | - | 642 | WP_011178575.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PMA4326_RS30220 () | 12794..13447 | + | 654 | WP_004666657.1 | Iron-sulfur cluster carrier protein | VF |
| PMA4326_RS30225 () | 13496..13807 | + | 312 | WP_004666658.1 | hypothetical protein | - |
| PMA4326_RS30230 () | 14012..14989 | + | 978 | WP_007247761.1 | IS5 family transposase IS52 | Transposase |
| PMA4326_RS30235 () | 15338..15718 | - | 381 | WP_080438749.1 | hypothetical protein | - |
| PMA4326_RS30240 () | 15966..16436 | - | 471 | WP_007253332.1 | hypothetical protein | - |
| PMA4326_RS30245 () | 16524..16874 | - | 351 | WP_004666693.1 | helix-turn-helix transcriptional regulator | - |
| PMA4326_RS30250 () | 17138..17665 | + | 528 | WP_007253333.1 | transcriptional regulator | - |
| PMA4326_RS30255 () | 17731..17946 | + | 216 | WP_004666691.1 | hypothetical protein | - |
| PMA4326_RS30260 () | 17975..18673 | + | 699 | WP_007253334.1 | Type IV secretion system protein virB1 | VF |
| PMA4326_RS30265 () | 18673..19008 | + | 336 | WP_007253335.1 | hypothetical protein | - |
| PMA4326_RS30270 () | 19021..19422 | + | 402 | Protein_23 | VirB3 family type IV secretion system protein | - |
| PMA4326_RS30275 () | 19358..21910 | + | 2553 | WP_007253337.1 | VirB4 family type IV secretion system protein | - |
| PMA4326_RS30280 () | 21907..22593 | + | 687 | WP_011178580.1 | P-type DNA transfer protein VirB5 | - |
| PMA4326_RS30285 () | 22626..22979 | + | 354 | WP_007253340.1 | hypothetical protein | - |
| PMA4326_RS30290 () | 22990..23922 | + | 933 | WP_007253341.1 | type IV secretion system protein | - |
| PMA4326_RS30295 () | 23990..24304 | + | 315 | WP_011178582.1 | hypothetical protein | - |
| PMA4326_RS30300 () | 24341..25129 | + | 789 | WP_007253342.1 | type IV secretion system protein | - |
| PMA4326_RS30305 () | 25119..25928 | + | 810 | WP_011178583.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PMA4326_RS30310 () | 25915..27264 | + | 1350 | WP_007253344.1 | Type IV secretion system protein virB10 | VF |
| PMA4326_RS30315 () | 27274..28332 | + | 1059 | WP_007253345.1 | Type IV secretion system protein VirB11 | VF |
| PMA4326_RS30320 () | 28342..28707 | + | 366 | WP_007253346.1 | hypothetical protein | - |
| PMA4326_RS30325 () | 28781..29071 | + | 291 | WP_007253347.1 | hypothetical protein | - |
| PMA4326_RS30330 () | 29068..29334 | + | 267 | WP_007253348.1 | hypothetical protein | - |
| PMA4326_RS30335 () | 29454..29687 | + | 234 | WP_057421666.1 | hypothetical protein | - |
| PMA4326_RS30340 () | 29687..29887 | + | 201 | WP_042914328.1 | hypothetical protein | VF |
| PMA4326_RS30345 () | 29923..30939 | + | 1017 | WP_007253350.1 | hypothetical protein | - |
| PMA4326_RS30350 () | 30987..31130 | + | 144 | WP_007253351.1 | hypothetical protein | - |
| PMA4326_RS30355 () | 31242..31475 | + | 234 | WP_159372490.1 | hypothetical protein | - |
| PMA4326_RS30360 () | 31475..33148 | + | 1674 | WP_007253352.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PMA4326_RS30365 () | 33189..33551 | + | 363 | WP_007253353.1 | Killer protein | - |
| PMA4326_RS30370 () | 33579..35744 | + | 2166 | WP_007253354.1 | type IA DNA topoisomerase | - |
| PMA4326_RS30375 () | 36062..36295 | + | 234 | WP_050775078.1 | hypothetical protein | - |
| PMA4326_RS30380 () | 36323..36883 | + | 561 | WP_007253356.1 | single-stranded DNA-binding protein | - |
| PMA4326_RS30385 () | 37225..37944 | + | 720 | WP_007253357.1 | hypothetical protein | - |
| PMA4326_RS30390 () | 37941..38513 | + | 573 | WP_007253358.1 | hypothetical protein | - |
| PMA4326_RS30395 () | 38532..39068 | - | 537 | Protein_48 | hypothetical protein | - |
| PMA4326_RS30400 () | 39293..40018 | + | 726 | WP_007253360.1 | relaxosome component | - |
| PMA4326_RS30405 () | 40008..43745 | + | 3738 | WP_011178586.1 | hypothetical protein | Relaxase |
| PMA4326_RS30410 () | 43921..44076 | + | 156 | WP_007253363.1 | hypothetical protein | - |
| PMA4326_RS30415 () | 44221..44649 | + | 429 | WP_007253364.1 | GntR family transcriptional regulator | - |
| PMA4326_RS30420 () | 45003..45905 | + | 903 | WP_042914329.1 | hypothetical protein | - |
| PMA4326_RS30880 () | 45922..46149 | + | 228 | WP_007253366.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|