MGE detailed information
MGE type: Genomic_island MGE length: 45914 bp
Accession: NZ_CP047218 Location: 4705898..4751811 Organism: Sphingobium yanoikuyae strain YC-JY1 Replicon: chromosome
Accession: NZ_CP047218 Location: 4705898..4751811 Organism: Sphingobium yanoikuyae strain YC-JY1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GS397_RS22240 () | 4700932..4701444 | + | 513 | WP_029547427.1 | outer membrane protein assembly factor BamE | - |
| GS397_RS22245 () | 4701961..4702245 | - | 285 | WP_159368109.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GS397_RS22250 () | 4702361..4703195 | + | 835 | Protein_4401 | aminoglycoside phosphotransferase family protein | - |
| GS397_RS22255 () | 4703202..4703898 | - | 697 | Protein_4402 | class I SAM-dependent methyltransferase | - |
| GS397_RS22260 () | 4703988..4705154 | - | 1167 | WP_159367691.1 | nucleotide sugar dehydrogenase | - |
| GS397_RS22265 () | 4705371..4705751 | - | 381 | WP_030092864.1 | helix-turn-helix transcriptional regulator | - |
| GS397_RS22270 () | 4705898..4706785 | + | 888 | WP_030092863.1 | Quinone oxidoreductase 2 | VF |
| GS397_RS22275 () | 4707023..4707619 | - | 597 | WP_069710411.1 | TetR/AcrR family transcriptional regulator | - |
| GS397_RS22280 () | 4707756..4709159 | + | 1404 | WP_037522124.1 | Outer membrane protein OprM | VF |
| GS397_RS22285 () | 4709174..4710340 | + | 1167 | WP_080727322.1 | putative multidrug resistance protein EmrK | VF |
| GS397_RS22290 () | 4710361..4711905 | + | 1545 | WP_159367692.1 | Multidrug export protein EmrB | VF |
| GS397_RS22295 () | 4711930..4712658 | + | 729 | WP_155276492.1 | putative HTH-type transcriptional regulator TtgW | VF |
| GS397_RS22300 () | 4712648..4713130 | + | 483 | WP_007686174.1 | hypothetical protein | - |
| GS397_RS22305 () | 4713127..4713933 | + | 807 | WP_007686172.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| GS397_RS22310 () | 4713984..4715273 | + | 1290 | WP_007686170.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| GS397_RS22315 () | 4715770..4716483 | + | 714 | WP_007686167.1 | phospholipase A | - |
| GS397_RS22320 () | 4716531..4717268 | - | 738 | WP_007686165.1 | hypothetical protein | - |
| GS397_RS22325 () | 4717276..4719309 | - | 2034 | Protein_4416 | AAA family ATPase | - |
| GS397_RS22330 () | 4719371..4720135 | + | 765 | WP_015449415.1 | IS6 family transposase IS6100 | Transposase |
| GS397_RS22335 () | 4720164..4720313 | + | 150 | WP_159368110.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GS397_RS22340 () | 4720416..4720742 | - | 327 | WP_063976428.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| GS397_RS22345 () | 4720739..4720996 | - | 258 | WP_063976429.1 | hypothetical protein | Antitoxin Detail |
| GS397_RS22350 () | 4721279..4721929 | - | 651 | WP_159367693.1 | hypothetical protein | - |
| GS397_RS22355 () | 4721930..4722460 | + | 531 | WP_159368111.1 | Alginate lyase 7 | VF |
| GS397_RS22360 () | 4722574..4722726 | + | 153 | WP_201450235.1 | DUF1491 family protein | - |
| GS397_RS22365 () | 4722790..4723392 | - | 603 | WP_159367695.1 | DUF1269 domain-containing protein | - |
| GS397_RS22370 () | 4723633..4724988 | - | 1356 | WP_006473457.1 | IS1380 family transposase IS1247 | Transposase |
| GS397_RS22375 () | 4725130..4725828 | - | 699 | WP_081260992.1 | TetR/AcrR family transcriptional regulator; helix-turn-helix transcriptional regulator | - |
| GS397_RS22380 () | 4725905..4726147 | + | 243 | WP_063976430.1 | hypothetical protein | - |
| GS397_RS22385 () | 4726198..4726683 | + | 486 | WP_063976431.1 | hypothetical protein | - |
| GS397_RS22390 () | 4726808..4728265 | - | 1458 | WP_122129195.1 | aldehyde dehydrogenase family protein | - |
| GS397_RS22395 () | 4728364..4729470 | - | 1107 | WP_201450342.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| GS397_RS22400 () | 4729607..4730044 | - | 438 | WP_122129112.1 | pseudoazurin | - |
| GS397_RS22405 () | 4730139..4731695 | - | 1557 | WP_159367696.1 | FAD-binding oxidoreductase | - |
| GS397_RS22410 () | 4731715..4732053 | - | 339 | WP_159367697.1 | cytochrome c | - |
| GS397_RS22415 () | 4732050..4732388 | - | 339 | WP_159367698.1 | hypothetical protein | - |
| GS397_RS22420 () | 4732752..4734407 | + | 1656 | WP_159368112.1 | Phenol regulator MopR | VF |
| GS397_RS22425 () | 4734501..4734644 | + | 144 | WP_159368113.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GS397_RS22430 () | 4734649..4734939 | + | 291 | WP_201450343.1 | HigA family addiction module antidote protein | - |
| GS397_RS22435 () | 4735149..4735601 | - | 453 | WP_159367700.1 | helix-turn-helix transcriptional regulator | - |
| GS397_RS22445 () | 4735999..4736352 | - | 354 | WP_159367701.1 | IS66 family transposase ISXau4 | Transposase |
| GS397_RS22450 () | 4736774..4737877 | - | 1104 | WP_015063481.1 | IS110 family transposase | - |
| GS397_RS22455 () | 4737961..4740252 | - | 2292 | Protein_4441 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| GS397_RS22460 () | 4740315..4741079 | + | 765 | WP_015449415.1 | IS6 family transposase IS6100 | Transposase |
| GS397_RS22465 () | 4741130..4741585 | - | 456 | Protein_4443 | TIGR01244 family phosphatase | - |
| GS397_RS22470 () | 4741612..4742019 | - | 408 | WP_180275705.1 | YeeE/YedE family protein | - |
| GS397_RS22475 () | 4742019..4742456 | - | 438 | WP_069336911.1 | YeeE/YedE family protein | - |
| GS397_RS22480 () | 4742453..4743370 | - | 918 | WP_069336921.1 | MBL fold metallo-hydrolase | - |
| GS397_RS22485 () | 4743471..4744094 | + | 624 | WP_159367702.1 | peroxiredoxin | - |
| GS397_RS22490 () | 4744091..4744465 | + | 375 | WP_069336910.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GS397_RS22495 () | 4744842..4745135 | + | 294 | WP_069336909.1 | integration host factor subunit beta | - |
| GS397_RS22500 () | 4745363..4746439 | + | 1077 | WP_069336908.1 | hypothetical protein | - |
| GS397_RS22505 () | 4746591..4746971 | + | 381 | WP_069336920.1 | STAS/SEC14 domain-containing protein | - |
| GS397_RS22510 () | 4747162..4747557 | + | 396 | WP_069336907.1 | group III truncated hemoglobin | - |
| GS397_RS22515 () | 4747585..4748271 | + | 687 | WP_159367703.1 | alternative oxidase | - |
| GS397_RS22520 () | 4748273..4748545 | + | 273 | WP_099232202.1 | DUF1971 domain-containing protein | - |
| GS397_RS22525 () | 4748601..4748807 | + | 207 | WP_069336904.1 | hypothetical protein | - |
| GS397_RS22535 () | 4750410..4751264 | + | 855 | WP_081331676.1 | AAA family ATPase | - |
| GS397_RS22540 () | 4751368..4751811 | + | 444 | WP_021224309.1 | potassium channel family protein | - |
| GS397_RS22545 () | 4752013..4753587 | + | 1575 | WP_201450344.1 | MBL fold metallo-hydrolase | - |
| GS397_RS22550 () | 4753584..4754477 | - | 894 | WP_069336900.1 | ribose-phosphate diphosphokinase | - |
| GS397_RS22555 () | 4754474..4755961 | - | 1488 | WP_069336899.1 | thymidine phosphorylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|