MGE detailed information
MGE type: Prophage MGE length: 42996 bp
Accession: NZ_CP047171 Location: 1298149..1341144 Organism: Xylella fastidiosa subsp. fastidiosa strain IVIA5235 Replicon: chromosome
Accession: NZ_CP047171 Location: 1298149..1341144 Organism: Xylella fastidiosa subsp. fastidiosa strain IVIA5235 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1605_RS05730 () | 1293611..1294342 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| D1605_RS05735 () | 1294422..1295282 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| D1605_RS05740 () | 1295487..1296305 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| D1605_RS05750 () | 1297078..1297422 | - | 345 | WP_004084923.1 | RidA family protein | - |
| D1605_RS05755 () | 1297625..1297957 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| D1605_RS05760 () | 1298149..1299231 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| D1605_RS05765 () | 1299222..1299440 | - | 219 | WP_004088371.1 | tail protein X | - |
| D1605_RS05770 () | 1299437..1299919 | - | 483 | WP_011097928.1 | phage tail protein | - |
| D1605_RS05775 () | 1299916..1302135 | - | 2220 | WP_011097929.1 | phage tail tape measure protein | - |
| D1605_RS05780 () | 1302262..1302549 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| D1605_RS05785 () | 1302552..1303061 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| D1605_RS05790 () | 1303061..1304239 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| D1605_RS05795 () | 1304304..1305896 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| D1605_RS05800 () | 1305904..1306461 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| D1605_RS05805 () | 1306454..1307347 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| D1605_RS05810 () | 1307347..1307685 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| D1605_RS05815 () | 1307835..1308098 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D1605_RS05820 () | 1308085..1308366 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| D1605_RS05825 () | 1308403..1308990 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| D1605_RS05830 () | 1308987..1309529 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| D1605_RS05835 () | 1309505..1310026 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| D1605_RS05840 () | 1310023..1310346 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| D1605_RS05845 () | 1310346..1310606 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| D1605_RS05850 () | 1310624..1312498 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| D1605_RS05855 () | 1312495..1314081 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| D1605_RS05860 () | 1314078..1314629 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| D1605_RS05865 () | 1314633..1316585 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| D1605_RS05870 () | 1316578..1317153 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| D1605_RS05875 () | 1317284..1317508 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| D1605_RS05880 () | 1317510..1317971 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| D1605_RS05885 () | 1317961..1318290 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| D1605_RS05890 () | 1318283..1318777 | - | 495 | WP_011097941.1 | lysozyme | - |
| D1605_RS05895 () | 1318744..1319361 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| D1605_RS05900 () | 1319780..1322311 | - | 2532 | WP_012382624.1 | primase | - |
| D1605_RS05905 () | 1322447..1323013 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| D1605_RS05910 () | 1323010..1323396 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| D1605_RS05915 () | 1323393..1323779 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| D1605_RS05920 () | 1323776..1324060 | - | 285 | Protein_1147 | hypothetical protein | - |
| D1605_RS05925 () | 1324275..1324545 | - | 271 | Protein_1148 | hypothetical protein | - |
| D1605_RS05930 () | 1324542..1324799 | - | 258 | WP_080729500.1 | hypothetical protein | - |
| D1605_RS05935 () | 1325030..1325275 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| D1605_RS05940 () | 1325336..1325584 | - | 249 | WP_011097950.1 | hypothetical protein | - |
| D1605_RS05945 () | 1325581..1325769 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| D1605_RS05950 () | 1325823..1326389 | - | 567 | WP_012382630.1 | hypothetical protein | - |
| D1605_RS05955 () | 1326379..1326639 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| D1605_RS05960 () | 1326725..1327483 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| D1605_RS05965 () | 1327644..1328183 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| D1605_RS05970 () | 1328206..1328415 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| D1605_RS05975 () | 1328469..1328852 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| D1605_RS05980 () | 1329070..1329459 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| D1605_RS05985 () | 1329456..1329920 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| D1605_RS05990 () | 1329977..1330459 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| D1605_RS05995 () | 1330759..1330950 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| D1605_RS06000 () | 1330974..1331165 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| D1605_RS06005 () | 1331197..1331394 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| D1605_RS06010 () | 1331381..1331878 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| D1605_RS06015 () | 1331875..1333152 | + | 1278 | WP_011097959.1 | DUF2800 domain-containing protein | - |
| D1605_RS06020 () | 1333152..1333718 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| D1605_RS06025 () | 1333805..1335316 | + | 1512 | WP_011097960.1 | hypothetical protein | - |
| D1605_RS06030 () | 1335318..1337498 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| D1605_RS06035 () | 1337495..1337773 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| D1605_RS06040 () | 1337775..1338221 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| D1605_RS06045 () | 1338306..1339724 | + | 1419 | WP_126709119.1 | DEAD/DEAH box helicase | - |
| D1605_RS06050 () | 1339721..1339885 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| D1605_RS06055 () | 1339878..1340135 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| D1605_RS06060 () | 1340125..1341144 | + | 1020 | WP_011097966.1 | tyrosine-type recombinase/integrase | - |
| D1605_RS06065 () | 1341508..1344099 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|