MGE detailed information
MGE type: Prophage MGE length: 56600 bp
Accession: NZ_CP047171 Location: 1170909..1227508 Organism: Xylella fastidiosa subsp. fastidiosa strain IVIA5235 Replicon: chromosome
Accession: NZ_CP047171 Location: 1170909..1227508 Organism: Xylella fastidiosa subsp. fastidiosa strain IVIA5235 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1605_RS05010 () | 1166233..1166487 | - | 255 | WP_004089715.1 | hypothetical protein | - |
| D1605_RS05015 () | 1166661..1166993 | - | 333 | WP_004089713.1 | DNA-binding transcriptional regulator | - |
| D1605_RS05020 () | 1167719..1168624 | - | 906 | WP_004089711.1 | hypothetical protein | - |
| D1605_RS05025 () | 1169122..1170018 | - | 897 | Protein_972 | peptidase | - |
| D1605_RS05030 () | 1170198..1170395 | - | 198 | WP_012382581.1 | hypothetical protein | - |
| D1605_RS05035 () | 1170909..1172072 | - | 1164 | WP_011097868.1 | phage tail protein | - |
| D1605_RS05040 () | 1172076..1172636 | - | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
| D1605_RS05045 () | 1172633..1173778 | - | 1146 | WP_011097984.1 | baseplate J/gp47 family protein | - |
| D1605_RS05050 () | 1173928..1174236 | - | 309 | WP_004089386.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D1605_RS05055 () | 1174245..1174484 | - | 240 | WP_011097871.1 | antitoxin | - |
| D1605_RS05060 () | 1174622..1174975 | - | 354 | WP_012382582.1 | hypothetical protein | - |
| D1605_RS05065 () | 1174972..1175613 | - | 642 | WP_012382583.1 | hypothetical protein | - |
| D1605_RS05070 () | 1175610..1176440 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| D1605_RS05075 () | 1176437..1176754 | - | 318 | WP_012382585.1 | hypothetical protein | - |
| D1605_RS05080 () | 1176754..1177524 | - | 771 | WP_012382586.1 | hypothetical protein | - |
| D1605_RS05085 () | 1177582..1177908 | + | 327 | WP_004091353.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D1605_RS05090 () | 1177905..1178186 | + | 282 | WP_004091355.1 | helix-turn-helix domain-containing protein | - |
| D1605_RS05095 () | 1178245..1180134 | - | 1890 | WP_011097989.1 | hypothetical protein | - |
| D1605_RS05100 () | 1180091..1180255 | - | 165 | WP_162849007.1 | hypothetical protein | - |
| D1605_RS05105 () | 1180282..1180704 | - | 423 | WP_012382587.1 | hypothetical protein | - |
| D1605_RS05110 () | 1180701..1181138 | - | 438 | WP_011097876.1 | DUF3277 family protein | - |
| D1605_RS05115 () | 1181148..1182644 | - | 1497 | WP_012382588.1 | DUF3383 domain-containing protein | - |
| D1605_RS05120 () | 1182645..1183178 | - | 534 | WP_004090297.1 | hypothetical protein | - |
| D1605_RS05125 () | 1183102..1183482 | - | 381 | WP_174851815.1 | hypothetical protein | - |
| D1605_RS05130 () | 1183457..1183936 | - | 480 | WP_012382590.1 | hypothetical protein | - |
| D1605_RS05135 () | 1183933..1184304 | - | 372 | WP_004085010.1 | DUF4054 domain-containing protein | - |
| D1605_RS05140 () | 1184307..1184606 | - | 300 | WP_012382591.1 | hypothetical protein | - |
| D1605_RS05145 () | 1184671..1185654 | - | 984 | WP_012382592.1 | DUF2184 domain-containing protein | - |
| D1605_RS05150 () | 1185664..1186146 | - | 483 | WP_004090290.1 | hypothetical protein | - |
| D1605_RS05155 () | 1186156..1187364 | - | 1209 | WP_004090289.1 | DUF2213 domain-containing protein | - |
| D1605_RS05160 () | 1187364..1188209 | - | 846 | WP_004090288.1 | phage head morphogenesis protein | - |
| D1605_RS05165 () | 1188278..1188616 | + | 339 | WP_011097884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D1605_RS05170 () | 1188613..1188894 | + | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| D1605_RS05175 () | 1188943..1190118 | - | 1176 | Protein_1002 | DUF1073 domain-containing protein | - |
| D1605_RS05180 () | 1190423..1191283 | - | 861 | WP_187120448.1 | DUF769 domain-containing protein | - |
| D1605_RS05185 () | 1191296..1192480 | - | 1185 | WP_011097887.1 | hypothetical protein | - |
| D1605_RS05190 () | 1192477..1193322 | - | 846 | WP_011097888.1 | DUF769 domain-containing protein | - |
| D1605_RS05195 () | 1193335..1203663 | - | 10329 | WP_187120449.1 | hemagglutinin repeat-containing protein | - |
| D1605_RS05200 () | 1203797..1203943 | + | 147 | WP_155115100.1 | hypothetical protein | - |
| D1605_RS05205 () | 1204059..1204301 | - | 243 | WP_011097889.1 | AlpA family phage regulatory protein | - |
| D1605_RS05210 () | 1204357..1205589 | - | 1233 | WP_011097890.1 | tyrosine-type recombinase/integrase | - |
| D1605_RS05215 () | 1205731..1206006 | - | 276 | WP_012382594.1 | hypothetical protein | - |
| D1605_RS05220 () | 1206003..1207553 | - | 1551 | WP_004090279.1 | phage terminase large subunit | - |
| D1605_RS05225 () | 1207543..1207902 | - | 360 | WP_004090276.1 | hypothetical protein | - |
| D1605_RS05230 () | 1207994..1208230 | - | 237 | WP_038233055.1 | hypothetical protein | - |
| D1605_RS05235 () | 1208208..1208669 | - | 462 | WP_011097892.1 | hypothetical protein | - |
| D1605_RS05240 () | 1208659..1208988 | - | 330 | WP_011097893.1 | phage holin family protein | - |
| D1605_RS05245 () | 1208981..1209478 | - | 498 | WP_004089579.1 | lysozyme | - |
| D1605_RS05250 () | 1209682..1210020 | - | 339 | WP_004089578.1 | BrnA antitoxin family protein | - |
| D1605_RS05255 () | 1210007..1210273 | - | 267 | WP_004089577.1 | BrnT family toxin | - |
| D1605_RS05260 () | 1210462..1211160 | - | 699 | WP_011097895.1 | hypothetical protein | - |
| D1605_RS05265 () | 1211289..1211750 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| D1605_RS05270 () | 1211747..1212511 | - | 765 | WP_004090689.1 | hypothetical protein | - |
| D1605_RS05275 () | 1212417..1213304 | - | 888 | WP_012382597.1 | YdaU family protein | - |
| D1605_RS05280 () | 1213301..1214089 | - | 789 | WP_011097897.1 | Bro-N domain-containing protein | - |
| D1605_RS05285 () | 1214086..1214718 | - | 633 | WP_004088094.1 | Bro-N domain-containing protein | - |
| D1605_RS05290 () | 1214715..1214999 | - | 285 | WP_004088096.1 | hypothetical protein | - |
| D1605_RS05295 () | 1214996..1215244 | - | 249 | WP_011097898.1 | hypothetical protein | - |
| D1605_RS05300 () | 1215241..1215429 | - | 189 | WP_004088102.1 | hypothetical protein | - |
| D1605_RS05305 () | 1215457..1215648 | - | 192 | WP_004088104.1 | hypothetical protein | - |
| D1605_RS05310 () | 1215907..1216152 | - | 246 | WP_004088108.1 | hypothetical protein | - |
| D1605_RS05315 () | 1216237..1216911 | + | 675 | WP_012382600.1 | helix-turn-helix transcriptional regulator | - |
| D1605_RS05320 () | 1216962..1217573 | - | 612 | WP_004088112.1 | Fic/DOC family protein | Toxin Detail |
| D1605_RS05325 () | 1217570..1217758 | - | 189 | WP_004088114.1 | antitoxin VbhA family protein | Antitoxin Detail |
| D1605_RS05330 () | 1218150..1218686 | + | 537 | WP_012382601.1 | hypothetical protein | - |
| D1605_RS05335 () | 1218683..1219096 | + | 414 | WP_004088056.1 | DUF1566 domain-containing protein | - |
| D1605_RS05340 () | 1219093..1219494 | + | 402 | WP_004088054.1 | hypothetical protein | - |
| D1605_RS05345 () | 1219491..1219640 | + | 150 | WP_012382602.1 | hypothetical protein | - |
| D1605_RS05350 () | 1219726..1220004 | + | 279 | WP_004088050.1 | hypothetical protein | - |
| D1605_RS05355 () | 1220027..1220218 | + | 192 | WP_012382603.1 | hypothetical protein | - |
| D1605_RS05360 () | 1220239..1220583 | + | 345 | WP_004088346.1 | hypothetical protein | - |
| D1605_RS05365 () | 1220623..1221444 | + | 822 | WP_004088345.1 | DUF2303 family protein | - |
| D1605_RS05370 () | 1221460..1222386 | + | 927 | WP_004088344.1 | phage recombination protein Bet | - |
| D1605_RS05375 () | 1222383..1224035 | + | 1653 | WP_004088343.1 | YqaJ viral recombinase family protein | - |
| D1605_RS05380 () | 1224064..1224828 | + | 765 | WP_011097903.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| D1605_RS05385 () | 1224822..1225085 | + | 264 | Protein_1044 | hypothetical protein | - |
| D1605_RS05390 () | 1225089..1225709 | + | 621 | WP_004088341.1 | Bro-N domain-containing protein | - |
| D1605_RS05395 () | 1225776..1226222 | + | 447 | WP_004088340.1 | single-stranded DNA-binding protein | - |
| D1605_RS05400 () | 1226241..1226489 | + | 249 | WP_011097904.1 | DUF4224 domain-containing protein | - |
| D1605_RS05405 () | 1226489..1227508 | + | 1020 | WP_011097905.1 | tyrosine-type recombinase/integrase | - |
| D1605_RS05410 () | 1227649..1228698 | + | 1050 | WP_012382604.1 | two-component sensor histidine kinase | - |
| D1605_RS05415 () | 1228691..1230118 | + | 1428 | WP_004572832.1 | nitrogen regulation protein NR(I) | - |
| D1605_RS05420 () | 1230180..1230956 | - | 777 | Protein_1051 | Tn3 family transposase | - |
| D1605_RS05425 () | 1230942..1231946 | + | 1005 | Protein_1052 | DNA topoisomerase III | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|