MGE detailed information
MGE type: Prophage MGE length: 48826 bp
Accession: NZ_CP047134 Location: 434819..483644 Organism: Xylella fastidiosa subsp. multiplex strain IVIA5901 Replicon: chromosome
Accession: NZ_CP047134 Location: 434819..483644 Organism: Xylella fastidiosa subsp. multiplex strain IVIA5901 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DVT08_RS01715 () | 430322..430981 | - | 660 | WP_004085204.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DVT08_RS01720 () | 431078..432994 | - | 1917 | WP_004085203.1 | phosphogluconate dehydratase | - |
| DVT08_RS01725 () | 433093..433812 | - | 720 | WP_004085202.1 | 6-phosphogluconolactonase | - |
| DVT08_RS01730 () | 433809..434822 | - | 1014 | WP_004085201.1 | glucokinase | - |
| DVT08_RS01735 () | 434819..436252 | - | 1434 | WP_021358465.1 | glucose-6-phosphate dehydrogenase | - |
| DVT08_RS01740 () | 436581..437675 | + | 1095 | WP_012337631.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| DVT08_RS01745 () | 437820..438623 | - | 804 | WP_004085198.1 | folate-binding protein YgfZ | - |
| DVT08_RS01750 () | 438936..439154 | + | 219 | WP_004085343.1 | DUF1674 domain-containing protein | - |
| DVT08_RS01755 () | 439212..439634 | + | 423 | WP_021358463.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| DVT08_RS01760 () | 439631..440014 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| DVT08_RS01765 () | 440022..441812 | + | 1791 | WP_004085196.1 | succinate dehydrogenase flavoprotein subunit | - |
| DVT08_RS01770 () | 441833..442618 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| DVT08_RS01775 () | 442739..442987 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| DVT08_RS01780 () | 443010..443391 | + | 382 | Protein_332 | hypothetical protein | - |
| DVT08_RS01785 () | 443417..444658 | + | 1242 | WP_128283823.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| DVT08_RS01790 () | 444651..445373 | + | 723 | WP_004085191.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DVT08_RS01795 () | 445721..448198 | + | 2478 | WP_012337634.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| DVT08_RS01800 () | 448183..448845 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| DVT08_RS01805 () | 448850..449287 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| DVT08_RS01810 () | 449305..451053 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| DVT08_RS01815 () | 451050..452069 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| DVT08_RS01820 () | 452444..453526 | - | 1083 | WP_162008282.1 | phage late control D family protein | - |
| DVT08_RS01825 () | 453517..453735 | - | 219 | WP_004085341.1 | tail protein X | - |
| DVT08_RS01830 () | 453732..454214 | - | 483 | WP_012337636.1 | phage tail protein | - |
| DVT08_RS01835 () | 454211..456430 | - | 2220 | WP_187120425.1 | phage tail tape measure protein | - |
| DVT08_RS01840 () | 456557..456844 | - | 288 | WP_128283755.1 | phage tail assembly protein | - |
| DVT08_RS01845 () | 456847..457356 | - | 510 | WP_128283754.1 | phage major tail tube protein | - |
| DVT08_RS01850 () | 457356..458534 | - | 1179 | WP_154436952.1 | phage tail sheath family protein | - |
| DVT08_RS01855 () | 458599..460191 | - | 1593 | WP_187120410.1 | tail fiber domain-containing protein | - |
| DVT08_RS01860 () | 460199..460756 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| DVT08_RS01865 () | 460749..461642 | - | 894 | WP_020852318.1 | baseplate J/gp47 family protein | - |
| DVT08_RS01870 () | 461642..461980 | - | 339 | WP_004085176.1 | GPW/gp25 family protein | - |
| DVT08_RS01875 () | 462114..462428 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DVT08_RS01880 () | 462430..462711 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| DVT08_RS01885 () | 462723..463022 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | - |
| DVT08_RS01890 () | 463027..463614 | - | 588 | WP_128283746.1 | phage baseplate assembly protein V | - |
| DVT08_RS01895 () | 463611..464153 | - | 543 | WP_187120411.1 | hypothetical protein | - |
| DVT08_RS01900 () | 464129..464650 | - | 522 | WP_187120412.1 | hypothetical protein | - |
| DVT08_RS01905 () | 464647..464970 | - | 324 | WP_154123771.1 | hypothetical protein | - |
| DVT08_RS01910 () | 464987..465229 | - | 243 | Protein_358 | hypothetical protein | - |
| DVT08_RS01915 () | 465247..467127 | - | 1881 | WP_187120413.1 | phage major capsid protein | - |
| DVT08_RS01920 () | 467124..468710 | - | 1587 | WP_128283777.1 | phage portal protein | - |
| DVT08_RS01925 () | 468707..469258 | - | 552 | WP_038230179.1 | hypothetical protein | - |
| DVT08_RS01930 () | 469262..471214 | - | 1953 | WP_128283775.1 | phage terminase large subunit family protein | - |
| DVT08_RS01935 () | 471207..471782 | - | 576 | WP_181008160.1 | terminase small subunit | - |
| DVT08_RS01940 () | 471913..472137 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| DVT08_RS01945 () | 472139..472600 | - | 462 | WP_169709972.1 | hypothetical protein | - |
| DVT08_RS01950 () | 472590..472919 | - | 330 | WP_128283718.1 | phage holin family protein | - |
| DVT08_RS01955 () | 472912..473412 | - | 501 | WP_128382956.1 | lysozyme | - |
| DVT08_RS01960 () | 473512..474243 | - | 732 | WP_169709925.1 | site-specific DNA-methyltransferase | - |
| DVT08_RS01965 () | 474433..474768 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DVT08_RS01970 () | 474765..475019 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DVT08_RS01975 () | 475072..475794 | - | 723 | WP_004085026.1 | hypothetical protein | - |
| DVT08_RS01980 () | 476332..477540 | + | 1209 | Protein_372 | DNA polymerase | - |
| DVT08_RS01985 () | 477537..477815 | + | 279 | WP_004085028.1 | VRR-NUC domain-containing protein | - |
| DVT08_RS01990 () | 477817..478221 | - | 405 | WP_004085029.1 | hypothetical protein | - |
| DVT08_RS01995 () | 478306..479724 | + | 1419 | WP_187120414.1 | DEAD/DEAH box helicase | - |
| DVT08_RS02000 () | 479721..479885 | + | 165 | WP_004086189.1 | hypothetical protein | - |
| DVT08_RS02005 () | 479878..480126 | + | 249 | WP_004086191.1 | DUF4224 domain-containing protein | - |
| DVT08_RS02010 () | 480126..481145 | + | 1020 | WP_187120381.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DVT08_RS02015 () | 481922..482563 | + | 642 | WP_004085684.1 | Chromosome-partitioning ATPase Soj | VF |
| DVT08_RS02020 () | 482591..483067 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| DVT08_RS02025 () | 483072..483644 | + | 573 | WP_004085682.1 | YceI family protein | - |
| DVT08_RS02030 () | 483641..485599 | + | 1959 | WP_038231298.1 | phospholipase D family protein | - |
| DVT08_RS02035 () | 486583..486975 | - | 393 | WP_071869548.1 | helix-turn-helix domain-containing protein | - |
| DVT08_RS02040 () | 487309..487669 | + | 361 | Protein_384 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|