MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP047127 Location: 1208083..1228111 Organism: Escherichia coli K-12 Replicon: chromosome
Accession: NZ_CP047127 Location: 1208083..1228111 Organism: Escherichia coli K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRF62_RS05795 () | 1203562..1204065 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| GRF62_RS05800 () | 1204078..1204608 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| GRF62_RS05805 () | 1204618..1207254 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| GRF62_RS05810 () | 1207321..1208046 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| GRF62_RS05815 () | 1208083..1208622 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| GRF62_RS05820 () | 1208687..1209235 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| GRF62_RS05825 () | 1209717..1210331 | - | 615 | WP_038404959.1 | Tyrosine recombinase XerD | VF |
| GRF62_RS05830 () | 1210324..1211021 | - | 698 | Protein_1139 | IS1 family transposase IS1A | Transposase |
| GRF62_RS05835 () | 1211567..1212169 | - | 603 | WP_000790589.1 | Tyrosine recombinase XerC | VF |
| GRF62_RS05840 () | 1213625..1214341 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| GRF62_RS05845 () | 1214361..1215467 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| GRF62_RS05850 () | 1215532..1216512 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| GRF62_RS05855 () | 1217095..1218335 | - | 1241 | Protein_1144 | DNA helicase | - |
| GRF62_RS05860 () | 1218451..1218696 | + | 246 | Protein_1145 | GNAT family N-acetyltransferase | - |
| GRF62_RS05865 () | 1219073..1219330 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| GRF62_RS05870 () | 1219342..1219887 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| GRF62_RS05875 () | 1219943..1220689 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| GRF62_RS05880 () | 1220858..1221076 | + | 219 | Protein_1149 | hypothetical protein | - |
| GRF62_RS22670 () | 1221114..1221230 | + | 117 | Protein_1150 | VOC family protein | - |
| GRF62_RS05885 () | 1221475..1222596 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| GRF62_RS05890 () | 1222593..1222871 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| GRF62_RS05895 () | 1222883..1224196 | + | 1314 | WP_000460842.1 | galactitol-specific PTS transporter subunit IIC | - |
| GRF62_RS05900 () | 1224209..1225015 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| GRF62_RS05905 () | 1225146..1225577 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| GRF62_RS05910 () | 1225589..1226221 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| GRF62_RS05915 () | 1226238..1227020 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GRF62_RS05920 () | 1227323..1228111 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| GRF62_RS05925 () | 1228116..1229021 | + | 906 | WP_000714564.1 | dihydrodipicolinate synthase family protein | - |
| GRF62_RS05930 () | 1229032..1230999 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| GRF62_RS05935 () | 1231106..1232455 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|