MGE detailed information
MGE type: Prophage MGE length: 63576 bp
Accession: NZ_CP047056 Location: 2894498..2958073 Organism: Succinivibrio dextrinosolvens strain Z6 Replicon: chromosome
Accession: NZ_CP047056 Location: 2894498..2958073 Organism: Succinivibrio dextrinosolvens strain Z6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDZ_RS12725 () | 2889671..2891005 | - | 1335 | WP_074838085.1 | anaerobic C4-dicarboxylate transporter | - |
| SDZ_RS12730 () | 2891363..2891839 | + | 477 | WP_074838081.1 | SsrA-binding protein SmpB | - |
| SDZ_RS12735 () | 2891923..2893629 | - | 1707 | WP_074838079.1 | STAS domain-containing protein | - |
| SDZ_RS12745 () | 2894498..2895625 | + | 1128 | WP_074838076.1 | Prophage integrase IntA ; Integrase | Integrase |
| SDZ_RS12750 () | 2895716..2895904 | - | 189 | WP_074838074.1 | hypothetical protein | - |
| SDZ_RS12755 () | 2895907..2896065 | - | 159 | WP_164954447.1 | hypothetical protein | - |
| SDZ_RS12760 () | 2896062..2896364 | - | 303 | WP_074838070.1 | hypothetical protein | - |
| SDZ_RS12765 () | 2896361..2896642 | - | 282 | WP_074838067.1 | DUF1653 domain-containing protein | - |
| SDZ_RS12770 () | 2896639..2897145 | - | 507 | WP_074838065.1 | hypothetical protein | - |
| SDZ_RS12775 () | 2897132..2897536 | - | 405 | WP_074838062.1 | hypothetical protein | - |
| SDZ_RS12780 () | 2897533..2897793 | - | 261 | WP_074838059.1 | hypothetical protein | - |
| SDZ_RS12785 () | 2897790..2898080 | - | 291 | WP_074838057.1 | hypothetical protein | - |
| SDZ_RS12790 () | 2898074..2898355 | - | 282 | WP_074838054.1 | hypothetical protein | - |
| SDZ_RS12795 () | 2898383..2898604 | - | 222 | WP_074838051.1 | hypothetical protein | - |
| SDZ_RS12800 () | 2898726..2898995 | - | 270 | WP_074838049.1 | hypothetical protein | - |
| SDZ_RS12805 () | 2898992..2899459 | - | 468 | WP_074838046.1 | hypothetical protein | - |
| SDZ_RS12810 () | 2899462..2899656 | - | 195 | WP_074838044.1 | hypothetical protein | - |
| SDZ_RS12815 () | 2899854..2900171 | - | 318 | WP_074838041.1 | hypothetical protein | - |
| SDZ_RS12820 () | 2900381..2901073 | - | 693 | WP_074838039.1 | XRE family transcriptional regulator | - |
| SDZ_RS12825 () | 2901214..2901411 | + | 198 | WP_074838036.1 | hypothetical protein | - |
| SDZ_RS12830 () | 2901412..2901738 | + | 327 | WP_074838033.1 | hypothetical protein | - |
| SDZ_RS12835 () | 2901714..2902796 | + | 1083 | WP_074838029.1 | DUF2800 domain-containing protein | - |
| SDZ_RS12840 () | 2902839..2903789 | + | 951 | WP_074838027.1 | ATP-binding protein | - |
| SDZ_RS12845 () | 2903821..2904357 | + | 537 | WP_074838025.1 | hypothetical protein | - |
| SDZ_RS12850 () | 2904366..2905970 | + | 1605 | WP_074838023.1 | DEAD/DEAH box helicase | - |
| SDZ_RS12855 () | 2905982..2908102 | + | 2121 | WP_074838021.1 | AAA family ATPase | - |
| SDZ_RS12860 () | 2908470..2908910 | + | 441 | WP_074838016.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SDZ_RS12865 () | 2908979..2909368 | + | 390 | WP_074838014.1 | DUF2513 domain-containing protein | - |
| SDZ_RS12870 () | 2909376..2909828 | + | 453 | WP_074838012.1 | hypothetical protein | - |
| SDZ_RS12875 () | 2910155..2910829 | + | 675 | WP_074838008.1 | hypothetical protein | - |
| SDZ_RS12880 () | 2911085..2911654 | + | 570 | WP_074838006.1 | hypothetical protein | - |
| SDZ_RS12885 () | 2911716..2911937 | + | 222 | WP_074838003.1 | toxin-antitoxin system protein | Antitoxin Detail |
| SDZ_RS12890 () | 2911940..2912209 | + | 270 | WP_074838001.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SDZ_RS12895 () | 2912359..2912691 | + | 333 | WP_143075355.1 | hypothetical protein | - |
| SDZ_RS12900 () | 2912861..2913304 | + | 444 | WP_074837997.1 | lysozyme | - |
| SDZ_RS12905 () | 2913710..2913901 | + | 192 | WP_074837995.1 | hypothetical protein | - |
| SDZ_RS12910 () | 2913877..2914371 | + | 495 | WP_074837993.1 | hypothetical protein | - |
| SDZ_RS12915 () | 2914399..2915139 | - | 741 | WP_074837991.1 | hypothetical protein | - |
| SDZ_RS12920 () | 2915217..2917064 | + | 1848 | WP_074837988.1 | phage terminase large subunit family protein | - |
| SDZ_RS12925 () | 2917061..2917309 | + | 249 | WP_074837986.1 | hypothetical protein | - |
| SDZ_RS12930 () | 2917313..2918950 | + | 1638 | WP_206735600.1 | phage portal protein | - |
| SDZ_RS12935 () | 2918940..2920067 | + | 1128 | WP_074837984.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| SDZ_RS12940 () | 2920085..2920441 | + | 357 | WP_074837982.1 | head decoration protein | - |
| SDZ_RS12945 () | 2920457..2921521 | + | 1065 | WP_074837980.1 | major capsid protein | - |
| SDZ_RS12950 () | 2921521..2921721 | + | 201 | WP_074837978.1 | hypothetical protein | - |
| SDZ_RS12955 () | 2921718..2922029 | + | 312 | WP_074837976.1 | hypothetical protein | - |
| SDZ_RS12960 () | 2922031..2922597 | + | 567 | WP_074837975.1 | phage tail protein | - |
| SDZ_RS12965 () | 2922597..2923118 | + | 522 | WP_074837972.1 | hypothetical protein | - |
| SDZ_RS12970 () | 2923132..2923413 | + | 282 | WP_074837970.1 | hypothetical protein | - |
| SDZ_RS12975 () | 2923417..2924901 | + | 1485 | WP_074837968.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| SDZ_RS12980 () | 2924955..2925482 | + | 528 | WP_074837966.1 | phage major tail tube protein | - |
| SDZ_RS12985 () | 2925493..2925801 | + | 309 | WP_074837964.1 | phage tail assembly protein | - |
| SDZ_RS12990 () | 2925989..2928427 | + | 2439 | WP_074837962.1 | phage tail tape measure protein | - |
| SDZ_RS12995 () | 2928424..2928675 | - | 252 | WP_074837960.1 | hypothetical protein | - |
| SDZ_RS13000 () | 2928724..2928939 | + | 216 | WP_074837957.1 | tail protein X | - |
| SDZ_RS13005 () | 2928927..2930036 | + | 1110 | WP_074837955.1 | hypothetical protein | - |
| SDZ_RS13010 () | 2930038..2930538 | + | 501 | WP_074837952.1 | phage baseplate assembly protein V | - |
| SDZ_RS13015 () | 2930547..2931656 | + | 1110 | WP_074837950.1 | PAAR domain-containing protein | - |
| SDZ_RS13020 () | 2931875..2932549 | + | 675 | WP_164954448.1 | hypothetical protein | - |
| SDZ_RS13025 () | 2932610..2933515 | - | 906 | WP_164954305.1 | IS4 family transposase ISPepr4 | Transposase |
| SDZ_RS13030 () | 2933628..2934032 | - | 405 | WP_164954304.1 | hypothetical protein | - |
| SDZ_RS13035 () | 2934610..2935044 | + | 435 | WP_074837944.1 | phage tail protein | - |
| SDZ_RS13040 () | 2935052..2935381 | + | 330 | WP_074837941.1 | GPW/gp25 family protein | - |
| SDZ_RS13045 () | 2935374..2936516 | + | 1143 | WP_074837939.1 | baseplate J/gp47 family protein | - |
| SDZ_RS13050 () | 2936509..2937171 | + | 663 | WP_074837937.1 | phage tail protein I | - |
| SDZ_RS13055 () | 2937185..2938294 | + | 1110 | WP_074837935.1 | phage tail protein | - |
| SDZ_RS13060 () | 2938329..2938754 | + | 426 | WP_164954449.1 | hypothetical protein | - |
| SDZ_RS13065 () | 2938939..2939187 | + | 249 | WP_143075353.1 | hypothetical protein | - |
| SDZ_RS13070 () | 2939437..2939679 | + | 243 | WP_164954450.1 | hypothetical protein | - |
| SDZ_RS13075 () | 2939676..2939909 | - | 234 | WP_074837930.1 | hypothetical protein | - |
| SDZ_RS13080 () | 2940826..2941971 | - | 1146 | WP_074837923.1 | Prophage integrase IntA ; Integrase | Integrase |
| SDZ_RS13085 () | 2941986..2942510 | + | 525 | WP_074837921.1 | hypothetical protein | - |
| SDZ_RS13090 () | 2942512..2942736 | + | 225 | WP_074837919.1 | hypothetical protein | - |
| SDZ_RS13095 () | 2943305..2943577 | + | 273 | WP_074837917.1 | hypothetical protein | - |
| SDZ_RS13100 () | 2943574..2943783 | + | 210 | WP_074837915.1 | type II toxin-antitoxin system HicA family toxin | - |
| SDZ_RS13105 () | 2944271..2945725 | - | 1455 | WP_074837913.1 | ATP-binding protein | - |
| SDZ_RS13110 () | 2946353..2951668 | + | 5316 | WP_074837912.1 | hypothetical protein | - |
| SDZ_RS13115 () | 2951709..2952317 | - | 609 | WP_074837910.1 | hypothetical protein | - |
| SDZ_RS13120 () | 2952529..2952792 | - | 264 | WP_074837908.1 | DUF1653 domain-containing protein | - |
| SDZ_RS13125 () | 2952888..2954600 | - | 1713 | WP_074837906.1 | adenine deaminase | - |
| SDZ_RS13130 () | 2954629..2955234 | - | 606 | WP_074837904.1 | hypothetical protein | - |
| SDZ_RS13135 () | 2955277..2955609 | - | 333 | WP_074837902.1 | hypothetical protein | - |
| SDZ_RS13140 () | 2956051..2956200 | + | 150 | WP_164954451.1 | hypothetical protein | - |
| SDZ_RS13145 () | 2956562..2957518 | + | 957 | WP_074837900.1 | transporter | - |
| SDZ_RS13150 () | 2957714..2958073 | + | 360 | Protein_2552 | IS200-IS605 family transposase ISMma22 | Transposase |
| SDZ_RS13155 () | 2958116..2958616 | + | 501 | WP_143075352.1 | hypothetical protein | - |
| SDZ_RS13160 () | 2958818..2960992 | + | 2175 | WP_074837896.1 | SpoIIE family protein phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|