MGE detailed information
MGE type: Conjugative plasmid MGE length: 103556 bp
Accession: NZ_CP046873 Location: 1..103556 Organism: Pseudomonas putida strain MX-2 Replicon: plasmid unnamed
Accession: NZ_CP046873 Location: 1..103556 Organism: Pseudomonas putida strain MX-2 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPM17_RS27100 () | 65..214 | + | 150 | WP_185280409.1 | DUF4942 domain-containing protein | - |
| GPM17_RS27105 () | 367..735 | + | 369 | WP_028692292.1 | hypothetical protein | - |
| GPM17_RS27110 () | 762..1079 | + | 318 | WP_028692291.1 | hypothetical protein | - |
| GPM17_RS27115 () | 1416..2507 | + | 1092 | WP_051555741.1 | hypothetical protein | - |
| GPM17_RS27120 () | 2653..2895 | + | 243 | WP_028692289.1 | hypothetical protein | - |
| GPM17_RS27125 () | 2947..4629 | + | 1683 | WP_028692288.1 | DNA cytosine methyltransferase | - |
| GPM17_RS27130 () | 4716..4937 | + | 222 | WP_028692287.1 | hypothetical protein | - |
| GPM17_RS27135 () | 4941..5381 | + | 441 | WP_028692286.1 | hypothetical protein | - |
| GPM17_RS27140 () | 5393..5656 | + | 264 | WP_134998160.1 | hypothetical protein | - |
| GPM17_RS27145 () | 6327..6722 | + | 396 | WP_051555729.1 | hypothetical protein | - |
| GPM17_RS27150 () | 6747..7304 | + | 558 | WP_028691958.1 | single-stranded DNA-binding protein | - |
| GPM17_RS27155 () | 7495..8322 | + | 828 | WP_028691957.1 | DUF945 domain-containing protein | - |
| GPM17_RS27160 () | 8381..8803 | + | 423 | WP_028691956.1 | hypothetical protein | - |
| GPM17_RS27165 () | 8827..9141 | + | 315 | WP_028691955.1 | hypothetical protein | - |
| GPM17_RS27170 () | 9163..10182 | + | 1020 | WP_051555728.1 | hypothetical protein | - |
| GPM17_RS27175 () | 10689..11057 | - | 369 | WP_137188492.1 | hypothetical protein | - |
| GPM17_RS27180 () | 11240..11305 | + | 66 | Protein_16 | EAL domain-containing protein | - |
| GPM17_RS27185 () | 11548..11820 | + | 273 | Protein_17 | EamA family transporter | - |
| GPM17_RS27190 () | 11852..13051 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| GPM17_RS27195 () | 13157..13807 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GPM17_RS27200 () | 13839..14081 | - | 243 | WP_000844627.1 | transposase | - |
| GPM17_RS27205 () | 14315..14881 | - | 567 | WP_003159185.1 | Tn3 family transposase ISPsy42 | Transposase |
| GPM17_RS27210 () | 15010..15258 | - | 249 | WP_012585400.1 | type II toxin-antitoxin system YafQ family toxin | - |
| GPM17_RS27215 () | 15518..16531 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GPM17_RS27220 () | 16823..17377 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| GPM17_RS27225 () | 17654..18309 | + | 656 | Protein_25 | Pentapeptide repeat protein | ARG |
| GPM17_RS27230 () | 18473..19027 | + | 555 | WP_003159191.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib4 | - |
| GPM17_RS27235 () | 19156..20118 | - | 963 | WP_004577240.1 | IS30 family transposase ISPpu17 | Transposase |
| GPM17_RS27240 () | 20338..21138 | + | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| GPM17_RS27245 () | 21155..21946 | + | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GPM17_RS27250 () | 22021..22494 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| GPM17_RS27255 () | 22715..22981 | + | 267 | WP_001144737.1 | hypothetical protein | Relaxase |
| GPM17_RS27260 () | 23124..23888 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| GPM17_RS27265 () | 24138..24776 | + | 639 | WP_008166580.1 | AAA family ATPase | - |
| GPM17_RS27270 () | 24798..25019 | + | 222 | WP_011178357.1 | chromosome partitioning protein ParB | - |
| GPM17_RS27275 () | 25128..25439 | + | 312 | WP_077268002.1 | hypothetical protein | - |
| GPM17_RS27280 () | 25596..26945 | + | 1350 | WP_128297848.1 | replication protein | - |
| GPM17_RS27285 () | 27026..27271 | + | 246 | WP_128297849.1 | hypothetical protein | - |
| GPM17_RS27290 () | 27523..27588 | + | 66 | Protein_38 | EAL domain-containing protein | - |
| GPM17_RS27295 () | 27663..29342 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| GPM17_RS27300 () | 29345..30253 | + | 909 | WP_003155746.1 | TniB family NTP-binding protein | - |
| GPM17_RS27305 () | 30250..31467 | + | 1218 | WP_006122485.1 | TniQ family protein | - |
| GPM17_RS27310 () | 31519..32133 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| GPM17_RS27315 () | 32199..33002 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GPM17_RS27320 () | 33002..33838 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| GPM17_RS27325 () | 33945..34421 | + | 477 | WP_028697649.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| GPM17_RS27330 () | 34496..35356 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| GPM17_RS27335 () | 35369..35911 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| GPM17_RS27340 () | 36393..36584 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| GPM17_RS27345 () | 36608..36835 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| GPM17_RS27350 () | 36886..38022 | + | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| GPM17_RS27355 () | 38137..38380 | + | 244 | Protein_51 | transposase | - |
| GPM17_RS27360 () | 38379..39557 | + | 1179 | Protein_52 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GPM17_RS27365 () | 39819..40616 | - | 798 | WP_028691952.1 | SprT-like domain-containing protein | - |
| GPM17_RS27370 () | 40747..41127 | - | 381 | WP_028691951.1 | hypothetical protein | - |
| GPM17_RS27375 () | 41131..41850 | - | 720 | WP_028691950.1 | plasmid stabilization protein | - |
| GPM17_RS27380 () | 41847..42302 | - | 456 | WP_028691949.1 | hypothetical protein | - |
| GPM17_RS27385 () | 42735..43118 | + | 384 | WP_028691948.1 | hypothetical protein | - |
| GPM17_RS27390 () | 43118..44668 | + | 1551 | WP_028691947.1 | type IV secretion system DNA-binding domain-containing protein | - |
| GPM17_RS27395 () | 44680..47616 | + | 2937 | WP_028691946.1 | Multifunctional conjugation protein TraI | Relaxase |
| GPM17_RS27400 () | 47618..48103 | - | 486 | WP_028691945.1 | hypothetical protein | - |
| GPM17_RS27405 () | 48224..49642 | - | 1419 | WP_181726247.1 | IS1182 family transposase ISPfl3 | Transposase |
| GPM17_RS27410 () | 49755..50387 | - | 633 | WP_028691944.1 | hypothetical protein | - |
| GPM17_RS27415 () | 50400..50957 | - | 558 | WP_051555727.1 | Phospholipase D | VF |
| GPM17_RS27420 () | 50995..51330 | - | 336 | WP_028691942.1 | hypothetical protein | - |
| GPM17_RS27425 () | 51359..52276 | - | 918 | WP_028691941.1 | Type IV secretion system protein virB1 | VF |
| GPM17_RS27430 () | 52260..53294 | - | 1035 | WP_028691940.1 | Type IV secretion system protein VirB11 | VF |
| GPM17_RS27435 () | 53304..54566 | - | 1263 | WP_028691939.1 | Type IV secretion system protein virB10 | VF |
| GPM17_RS27440 () | 54569..55354 | - | 786 | WP_028691938.1 | Type IV secretion system protein virB9 | VF |
| GPM17_RS27445 () | 55382..56056 | - | 675 | WP_028691937.1 | type IV secretion system protein | - |
| GPM17_RS27450 () | 56056..56919 | - | 864 | WP_028691936.1 | type IV secretion system protein | - |
| GPM17_RS27455 () | 56907..57299 | - | 393 | WP_028691935.1 | hypothetical protein | - |
| GPM17_RS27460 () | 57292..57504 | - | 213 | WP_028691934.1 | hypothetical protein | - |
| GPM17_RS27465 () | 57532..58221 | - | 690 | WP_077563720.1 | hypothetical protein | - |
| GPM17_RS27470 () | 58221..60904 | - | 2684 | Protein_74 | Type IV secretion system protein virB4 | VF |
| GPM17_RS27475 () | 60891..61187 | - | 297 | WP_011005967.1 | VirB3 family type IV secretion system protein | - |
| GPM17_RS27480 () | 61196..61657 | - | 462 | WP_047710201.1 | TrbC/VirB2 family protein | - |
| GPM17_RS27485 () | 62661..62924 | + | 264 | WP_185280407.1 | ParA family protein | - |
| GPM17_RS27490 () | 62837..63427 | + | 591 | WP_185280408.1 | Chromosome-partitioning ATPase Soj | VF |
| GPM17_RS27495 () | 63438..64382 | + | 945 | WP_028691930.1 | ParB/RepB/Spo0J family partition protein | - |
| GPM17_RS27500 () | 64379..64729 | + | 351 | WP_028691929.1 | ParR | - |
| GPM17_RS27505 () | 64726..65133 | + | 408 | WP_028691928.1 | hypothetical protein | - |
| GPM17_RS27510 () | 65391..66026 | + | 636 | WP_028691927.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GPM17_RS27515 () | 66482..67039 | + | 558 | WP_051555726.1 | hypothetical protein | - |
| GPM17_RS27520 () | 67068..67358 | + | 291 | WP_051555725.1 | hypothetical protein | - |
| GPM17_RS27525 () | 67351..67896 | + | 546 | WP_036986388.1 | hypothetical protein | - |
| GPM17_RS27530 () | 67988..69307 | + | 1320 | WP_139139526.1 | DUF1173 family protein | - |
| GPM17_RS27535 () | 69519..70058 | + | 540 | WP_051555730.1 | hypothetical protein | - |
| GPM17_RS27540 () | 70075..71357 | - | 1283 | Protein_88 | Y-family DNA polymerase | - |
| GPM17_RS27545 () | 71347..71775 | - | 429 | WP_028691923.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GPM17_RS27550 () | 73844..74167 | - | 324 | WP_028692297.1 | hypothetical protein | - |
| GPM17_RS27555 () | 74462..74683 | - | 222 | WP_028692296.1 | hypothetical protein | - |
| GPM17_RS27560 () | 74703..75002 | - | 300 | WP_028692295.1 | putative addiction module antidote protein | Antitoxin Detail |
| GPM17_RS27565 () | 74999..75301 | - | 303 | WP_028692294.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPM17_RS27570 () | 75504..76283 | + | 780 | WP_028692293.1 | DUF4942 domain-containing protein | - |
| GPM17_RS27575 () | 76436..76804 | + | 369 | WP_028692292.1 | hypothetical protein | - |
| GPM17_RS27580 () | 76831..77148 | + | 318 | WP_028692291.1 | hypothetical protein | - |
| GPM17_RS27585 () | 77486..78577 | + | 1092 | WP_051555741.1 | hypothetical protein | - |
| GPM17_RS27590 () | 78723..78965 | + | 243 | WP_028692289.1 | hypothetical protein | - |
| GPM17_RS27595 () | 79017..80699 | + | 1683 | WP_028692288.1 | DNA cytosine methyltransferase | - |
| GPM17_RS27600 () | 80786..81007 | + | 222 | WP_028692287.1 | hypothetical protein | - |
| GPM17_RS27605 () | 81011..81451 | + | 441 | WP_028692286.1 | hypothetical protein | - |
| GPM17_RS27610 () | 81463..81726 | + | 264 | WP_134998160.1 | hypothetical protein | - |
| GPM17_RS27615 () | 82397..82792 | + | 396 | WP_051555729.1 | hypothetical protein | - |
| GPM17_RS27620 () | 82817..83374 | + | 558 | WP_028691958.1 | single-stranded DNA-binding protein | - |
| GPM17_RS27625 () | 83565..84392 | + | 828 | WP_028691957.1 | DUF945 domain-containing protein | - |
| GPM17_RS27630 () | 84451..84873 | + | 423 | WP_028691956.1 | hypothetical protein | - |
| GPM17_RS27635 () | 84897..85211 | + | 315 | WP_028691955.1 | hypothetical protein | - |
| GPM17_RS27640 () | 85233..86252 | + | 1020 | WP_051555728.1 | hypothetical protein | - |
| GPM17_RS27645 () | 86759..87127 | - | 369 | WP_137188492.1 | hypothetical protein | - |
| GPM17_RS27650 () | 87310..87375 | + | 66 | Protein_110 | EAL domain-containing protein | - |
| GPM17_RS27655 () | 87618..87890 | + | 273 | Protein_111 | EamA family transporter | - |
| GPM17_RS27660 () | 87922..89121 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| GPM17_RS27665 () | 89227..89877 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GPM17_RS27670 () | 89909..90151 | - | 243 | WP_000844627.1 | transposase | - |
| GPM17_RS27675 () | 90385..90951 | - | 567 | WP_003159185.1 | Tn3 family transposase ISPsy42 | Transposase |
| GPM17_RS27680 () | 91080..91328 | - | 249 | WP_012585400.1 | type II toxin-antitoxin system YafQ family toxin | - |
| GPM17_RS27685 () | 91588..92601 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GPM17_RS27690 () | 92893..93447 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| GPM17_RS27695 () | 93576..94538 | - | 963 | WP_004577240.1 | IS30 family transposase ISPpu17 | Transposase |
| GPM17_RS27700 () | 94758..95558 | + | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| GPM17_RS27705 () | 95575..96366 | + | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GPM17_RS27710 () | 96441..96914 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| GPM17_RS27715 () | 97135..97401 | + | 267 | WP_001144737.1 | hypothetical protein | Relaxase |
| GPM17_RS27720 () | 97544..98308 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| GPM17_RS27725 () | 98558..99196 | + | 639 | WP_008166580.1 | AAA family ATPase | - |
| GPM17_RS27730 () | 99218..99439 | + | 222 | WP_011178357.1 | chromosome partitioning protein ParB | - |
| GPM17_RS27735 () | 99548..99859 | + | 312 | WP_077268002.1 | hypothetical protein | - |
| GPM17_RS27740 () | 100016..101365 | + | 1350 | WP_128297848.1 | replication protein | - |
| GPM17_RS27745 () | 101446..101691 | + | 246 | WP_128297849.1 | hypothetical protein | - |
| GPM17_RS27750 () | 101942..102007 | + | 66 | Protein_130 | EAL domain-containing protein | - |
| GPM17_RS27755 () | 102082..103556 | + | 1475 | Protein_131 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|