MGE detailed information
MGE type: Genomic_island MGE length: 13961 bp
Accession: NZ_CP046839 Location: 2287600..2301560 Organism: Vibrio cholerae strain 2011EL-1271 Replicon: chromosome
Accession: NZ_CP046839 Location: 2287600..2301560 Organism: Vibrio cholerae strain 2011EL-1271 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY01_RS14985 () | 2284287..2286107 | + | 1821 | WP_123161585.1 | conjugative transfer system coupling protein TraD | - |
| GPY01_RS14990 () | 2286117..2286677 | + | 561 | WP_123161586.1 | conjugative transfer protein | - |
| GPY01_RS14995 () | 2286664..2287299 | + | 636 | WP_123161587.1 | DUF4400 domain-containing protein | - |
| GPY01_RS15000 () | 2287325..2287603 | - | 279 | WP_000058216.1 | helix-turn-helix domain-containing protein | - |
| GPY01_RS15005 () | 2287600..2287923 | - | 324 | WP_054103799.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GPY01_RS15010 () | 2288104..2288385 | + | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| GPY01_RS15015 () | 2288382..2289008 | + | 627 | WP_000667170.1 | hypothetical protein | - |
| GPY01_RS15020 () | 2288992..2289888 | + | 897 | WP_123161676.1 | type-F conjugative transfer system secretin TraK | - |
| GPY01_RS15025 () | 2289891..2291180 | + | 1290 | WP_123161588.1 | TraB/VirB10 family protein | - |
| GPY01_RS15030 () | 2291255..2291827 | + | 573 | WP_148039504.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GPY01_RS15035 () | 2291824..2292210 | + | 387 | WP_123161589.1 | hypothetical protein | - |
| GPY01_RS15040 () | 2292430..2293221 | + | 792 | WP_000095578.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| GPY01_RS15045 () | 2293214..2294152 | + | 939 | WP_123161590.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| GPY01_RS15050 () | 2294732..2297461 | + | 2730 | WP_123161591.1 | AAA family ATPase | - |
| GPY01_RS15055 () | 2297458..2298567 | + | 1110 | WP_123161592.1 | hypothetical protein | - |
| GPY01_RS15060 () | 2298580..2300112 | + | 1533 | WP_032469922.1 | phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | - |
| GPY01_RS15065 () | 2300115..2301560 | + | 1446 | WP_032469923.1 | Regulatory protein LuxO | VF |
| GPY01_RS15070 () | 2301705..2302397 | + | 693 | WP_001228924.1 | DsbC family protein | - |
| GPY01_RS15075 () | 2302397..2304796 | + | 2400 | WP_123161593.1 | type IV secretion system protein TraC | - |
| GPY01_RS15080 () | 2304789..2305136 | + | 348 | WP_004249366.1 | hypothetical protein | - |
| GPY01_RS15085 () | 2305120..2305632 | + | 513 | WP_184480164.1 | S26 family signal peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|