MGE detailed information
MGE type: Integron MGE length: 88568 bp
Accession: NZ_CP046787 Location: 2311652..2400219 Organism: Vibrio parahaemolyticus strain 2013V-1174 Replicon: chromosome
Accession: NZ_CP046787 Location: 2311652..2400219 Organism: Vibrio parahaemolyticus strain 2013V-1174 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY29_RS11280 () | 2307007..2307552 | + | 546 | WP_020838913.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS11285 () | 2307580..2308206 | + | 627 | WP_020838912.1 | LysE family translocator | - |
| GPY29_RS11290 () | 2308374..2309298 | - | 925 | Protein_2029 | IS1595 family transposase | - |
| GPY29_RS11295 () | 2310083..2310577 | - | 495 | WP_021453448.1 | hypothetical protein | - |
| GPY29_RS11300 () | 2310681..2311601 | - | 921 | WP_029837691.1 | IS5 family transposase | - |
| GPY29_RS11305 () | 2311652..2312047 | - | 396 | WP_029830832.1 | hypothetical protein | - |
| GPY29_RS11310 () | 2312212..2312625 | - | 414 | WP_015296875.1 | VOC family protein | - |
| GPY29_RS11320 () | 2313172..2313309 | - | 138 | WP_161618582.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11325 () | 2313720..2313812 | - | 93 | WP_011105940.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11330 () | 2314175..2314267 | - | 93 | WP_010645277.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11335 () | 2314282..2314863 | - | 582 | WP_029840792.1 | hypothetical protein | - |
| GPY29_RS11340 () | 2315016..2315384 | - | 369 | WP_029831795.1 | VOC family protein | - |
| GPY29_RS11345 () | 2315521..2316168 | - | 648 | WP_029831750.1 | hypothetical protein | - |
| GPY29_RS11350 () | 2316313..2316897 | - | 585 | WP_029831749.1 | hypothetical protein | - |
| GPY29_RS11355 () | 2317117..2317392 | - | 276 | WP_029831959.1 | hypothetical protein | - |
| GPY29_RS11360 () | 2317453..2317542 | - | 90 | WP_079763908.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11365 () | 2318170..2318928 | - | 759 | WP_029831873.1 | hypothetical protein | - |
| GPY29_RS11370 () | 2319074..2319739 | - | 666 | WP_031781909.1 | AbiV family abortive infection protein | - |
| GPY29_RS11375 () | 2319885..2320523 | - | 639 | WP_049876719.1 | DUF4145 domain-containing protein | - |
| GPY29_RS11380 () | 2320550..2320642 | - | 93 | WP_079750026.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11385 () | 2320664..2321593 | - | 930 | WP_049876709.1 | hypothetical protein | - |
| GPY29_RS11390 () | 2321628..2321720 | - | 93 | WP_079750025.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11395 () | 2321735..2322409 | - | 675 | WP_029840586.1 | site-specific DNA-methyltransferase | - |
| GPY29_RS11405 () | 2322879..2323373 | - | 495 | WP_029840588.1 | acetyltransferase | - |
| GPY29_RS11410 () | 2323406..2323537 | - | 132 | Protein_2051 | DUF3265 domain-containing protein | - |
| GPY29_RS11420 () | 2323924..2324016 | - | 93 | WP_079750054.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11425 () | 2324039..2324506 | - | 468 | WP_025630548.1 | NUDIX domain-containing protein | - |
| GPY29_RS11430 () | 2324534..2324665 | - | 132 | WP_074050600.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11440 () | 2325799..2326290 | - | 492 | WP_005377021.1 | RDD family protein | - |
| GPY29_RS11445 () | 2326522..2326998 | - | 477 | WP_029826981.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS11450 () | 2327026..2327156 | - | 131 | Protein_2057 | DUF3265 domain-containing protein | - |
| GPY29_RS11460 () | 2328127..2328265 | - | 139 | Protein_2058 | DUF3265 domain-containing protein | - |
| GPY29_RS11465 () | 2328798..2329217 | - | 420 | WP_029840808.1 | hypothetical protein | - |
| GPY29_RS11470 () | 2329325..2330224 | - | 900 | WP_049880008.1 | DUF2971 domain-containing protein | - |
| GPY29_RS11475 () | 2330366..2330773 | - | 408 | WP_025527517.1 | OsmC family protein | - |
| GPY29_RS11480 () | 2330933..2331331 | - | 399 | WP_020838813.1 | SMI1/KNR4 family protein | - |
| GPY29_RS11485 () | 2331358..2331450 | - | 93 | WP_079749986.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11490 () | 2331465..2331809 | - | 345 | WP_029841028.1 | hypothetical protein | - |
| GPY29_RS11495 () | 2331842..2331934 | - | 93 | WP_072612521.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11500 () | 2331949..2332824 | - | 876 | WP_031830082.1 | nucleotide-binding protein | - |
| GPY29_RS11510 () | 2333912..2334004 | - | 93 | WP_079749985.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11515 () | 2334031..2334360 | - | 330 | WP_029840956.1 | hypothetical protein | - |
| GPY29_RS11520 () | 2335085..2335498 | - | 414 | WP_029840925.1 | hypothetical protein | - |
| GPY29_RS11525 () | 2335527..2335616 | - | 90 | WP_076665338.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11530 () | 2335653..2336069 | - | 417 | WP_029840705.1 | DUF1311 domain-containing protein | - |
| GPY29_RS11535 () | 2336222..2336536 | - | 315 | Protein_2072 | DUF4144 domain-containing protein | - |
| GPY29_RS11540 () | 2336681..2337154 | - | 474 | WP_029840706.1 | hypothetical protein | - |
| GPY29_RS11545 () | 2337190..2337282 | - | 93 | WP_079750045.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11550 () | 2337297..2337614 | - | 318 | WP_000640723.1 | heavy metal-binding domain-containing protein | - |
| GPY29_RS11555 () | 2337642..2337734 | - | 93 | WP_005434063.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11560 () | 2337772..2338224 | - | 453 | WP_031830111.1 | hypothetical protein | - |
| GPY29_RS11565 () | 2338260..2338349 | - | 90 | WP_069533673.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11570 () | 2339354..2339446 | - | 93 | WP_072036351.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11575 () | 2339461..2340138 | - | 678 | WP_029840974.1 | hypothetical protein | - |
| GPY29_RS11580 () | 2340175..2340267 | - | 93 | WP_005526494.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11585 () | 2340282..2340791 | - | 510 | WP_031782115.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS11590 () | 2340772..2340906 | - | 135 | WP_079750027.1 | hypothetical protein | - |
| GPY29_RS11595 () | 2340960..2341874 | - | 915 | WP_029840832.1 | hypothetical protein | - |
| GPY29_RS11600 () | 2342086..2342631 | - | 546 | WP_127891315.1 | hypothetical protein | - |
| GPY29_RS11610 () | 2343229..2343339 | - | 111 | WP_101892238.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11615 () | 2343861..2344220 | - | 360 | WP_029841057.1 | VOC family protein | - |
| GPY29_RS11620 () | 2344266..2344415 | - | 150 | WP_079749970.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11625 () | 2344918..2345415 | - | 498 | WP_029840855.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS11630 () | 2345520..2346305 | - | 786 | WP_017420675.1 | hypothetical protein | - |
| GPY29_RS11635 () | 2346332..2346424 | - | 93 | WP_079749971.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11640 () | 2346439..2347071 | - | 633 | WP_029840683.1 | hypothetical protein | - |
| GPY29_RS11645 () | 2347108..2347197 | - | 90 | WP_079749979.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11650 () | 2347215..2347904 | - | 690 | WP_029840681.1 | hypothetical protein | - |
| GPY29_RS11655 () | 2347965..2348054 | - | 90 | WP_079749980.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11660 () | 2348072..2348380 | - | 309 | WP_025611619.1 | hypothetical protein | - |
| GPY29_RS11665 () | 2348425..2348517 | - | 93 | WP_079749972.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11670 () | 2348544..2349647 | - | 1104 | WP_029840910.1 | hypothetical protein | - |
| GPY29_RS11675 () | 2349699..2349788 | - | 90 | WP_072829120.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11680 () | 2350299..2350421 | - | 123 | WP_079763903.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11685 () | 2350431..2350652 | - | 222 | WP_017420735.1 | VF530 family protein | - |
| GPY29_RS11690 () | 2350793..2350885 | - | 93 | WP_079749973.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11695 () | 2350900..2351334 | - | 435 | WP_025510766.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS11700 () | 2351499..2352032 | - | 534 | WP_029840898.1 | hypothetical protein | - |
| GPY29_RS11705 () | 2352061..2352153 | - | 93 | WP_006074995.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11710 () | 2352186..2352464 | - | 279 | WP_031813963.1 | hypothetical protein | - |
| GPY29_RS11715 () | 2353038..2353253 | - | 216 | Protein_2107 | DUF3265 domain-containing protein | - |
| GPY29_RS11720 () | 2353865..2353957 | - | 93 | WP_079749982.1 | DUF3265 domain-containing protein | - |
| GPY29_RS25455 () | 2353972..2354232 | - | 261 | WP_031813944.1 | hypothetical protein | - |
| GPY29_RS11725 () | 2354329..2354421 | - | 93 | WP_079749974.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11730 () | 2354436..2354972 | - | 537 | WP_049880005.1 | DUF1643 domain-containing protein | - |
| GPY29_RS11735 () | 2355005..2355097 | - | 93 | WP_079749976.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11740 () | 2355112..2355975 | - | 864 | WP_031781804.1 | hypothetical protein | - |
| GPY29_RS11745 () | 2356012..2356122 | - | 111 | WP_079749983.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11750 () | 2356663..2357622 | - | 960 | WP_031781805.1 | hypothetical protein | - |
| GPY29_RS11755 () | 2357688..2357825 | - | 138 | WP_161618753.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11760 () | 2358300..2358392 | - | 93 | WP_005445734.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11765 () | 2358417..2359361 | - | 945 | WP_049880006.1 | hypothetical protein | - |
| GPY29_RS11770 () | 2359378..2359470 | - | 93 | WP_004749071.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11775 () | 2359485..2360054 | - | 570 | WP_049876714.1 | hypothetical protein | - |
| GPY29_RS11780 () | 2360087..2360203 | - | 117 | WP_079749977.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11785 () | 2360193..2360729 | - | 537 | WP_029840883.1 | nucleotidyltransferase family protein | - |
| GPY29_RS11790 () | 2360870..2361208 | - | 339 | WP_023667308.1 | hypothetical protein | - |
| GPY29_RS11795 () | 2361361..2361900 | - | 540 | WP_031781839.1 | hypothetical protein | - |
| GPY29_RS11800 () | 2362630..2363094 | - | 465 | WP_029840760.1 | hypothetical protein | - |
| GPY29_RS11805 () | 2363232..2363810 | - | 579 | WP_029840764.1 | hypothetical protein | - |
| GPY29_RS11810 () | 2364411..2364938 | - | 528 | WP_049876715.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS11815 () | 2364950..2365042 | - | 93 | WP_079749978.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11820 () | 2365067..2365975 | - | 909 | WP_049876717.1 | TIR domain-containing protein | - |
| GPY29_RS11825 () | 2366121..2366480 | - | 360 | WP_029841057.1 | VOC family protein | - |
| GPY29_RS11835 () | 2366641..2366988 | - | 348 | WP_029840795.1 | hypothetical protein | - |
| GPY29_RS11840 () | 2367016..2367126 | - | 111 | WP_079750055.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11845 () | 2367123..2367464 | - | 342 | WP_029840797.1 | hypothetical protein | - |
| GPY29_RS11850 () | 2367615..2368103 | - | 489 | WP_029840800.1 | hypothetical protein | - |
| GPY29_RS11855 () | 2368754..2369041 | - | 288 | WP_029840597.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY29_RS11860 () | 2369038..2369319 | - | 282 | WP_025633738.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY29_RS11865 () | 2369642..2369950 | + | 309 | WP_197580052.1 | thiamine-binding protein | - |
| GPY29_RS11870 () | 2369987..2370109 | - | 123 | WP_079749993.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11880 () | 2370452..2370580 | - | 129 | WP_079749991.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11885 () | 2370602..2370820 | - | 219 | WP_021453865.1 | hypothetical protein | - |
| GPY29_RS11890 () | 2370937..2371050 | - | 114 | WP_194295466.1 | DUF3265 domain-containing protein | - |
| GPY29_RS25460 () | 2371485..2371576 | - | 92 | Protein_2142 | DUF3265 domain-containing protein | - |
| GPY29_RS11905 () | 2371591..2372100 | - | 510 | WP_031781899.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS25465 () | 2372138..2372254 | - | 117 | WP_170827217.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11910 () | 2372244..2372759 | - | 516 | WP_031781898.1 | hypothetical protein | - |
| GPY29_RS11915 () | 2372790..2372882 | - | 93 | WP_079749987.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11920 () | 2372907..2374643 | - | 1737 | WP_031829430.1 | AAA family ATPase | - |
| GPY29_RS11925 () | 2374797..2375081 | - | 285 | WP_031781689.1 | hypothetical protein | - |
| GPY29_RS11930 () | 2375217..2375720 | - | 504 | WP_031781688.1 | DUF4236 domain-containing protein | - |
| GPY29_RS11935 () | 2375881..2376441 | - | 561 | WP_031781687.1 | hypothetical protein | - |
| GPY29_RS11940 () | 2376589..2377716 | - | 1128 | WP_031829439.1 | DUF3800 domain-containing protein | - |
| GPY29_RS25470 () | 2377746..2377913 | - | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11950 () | 2378186..2378278 | - | 93 | WP_074050578.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11955 () | 2378293..2378802 | - | 510 | WP_031781974.1 | hypothetical protein | - |
| GPY29_RS11960 () | 2378720..2378923 | - | 204 | WP_080360970.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11965 () | 2378945..2379163 | - | 219 | WP_017449592.1 | hypothetical protein | - |
| GPY29_RS11970 () | 2379386..2379958 | - | 573 | WP_031829442.1 | hypothetical protein | - |
| GPY29_RS11975 () | 2379987..2380118 | - | 132 | WP_074050600.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11985 () | 2380606..2380698 | - | 93 | WP_079750054.1 | DUF3265 domain-containing protein | - |
| GPY29_RS11990 () | 2380721..2381188 | - | 468 | WP_025630548.1 | NUDIX domain-containing protein | - |
| GPY29_RS11995 () | 2381216..2381308 | - | 93 | WP_074050578.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12000 () | 2381323..2381832 | - | 510 | WP_031781974.1 | hypothetical protein | - |
| GPY29_RS12005 () | 2381964..2382398 | - | 435 | WP_031829386.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS12010 () | 2382536..2383312 | - | 777 | WP_031781668.1 | choline kinase | - |
| GPY29_RS25475 () | 2383934..2384005 | - | 72 | WP_165386926.1 | hypothetical protein | - |
| GPY29_RS12020 () | 2384924..2385529 | - | 606 | WP_031781954.1 | hypothetical protein | - |
| GPY29_RS12025 () | 2385691..2386014 | - | 324 | WP_031781953.1 | hypothetical protein | - |
| GPY29_RS12030 () | 2386167..2386481 | - | 315 | Protein_2168 | DUF4144 domain-containing protein | - |
| GPY29_RS12035 () | 2386510..2386599 | - | 90 | WP_069533673.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12040 () | 2387120..2387230 | - | 111 | WP_079750055.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12045 () | 2387227..2387568 | - | 342 | WP_029840797.1 | hypothetical protein | - |
| GPY29_RS12050 () | 2387596..2387688 | - | 93 | WP_079750019.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12055 () | 2387708..2387911 | - | 204 | WP_031781972.1 | hypothetical protein | - |
| GPY29_RS12060 () | 2387895..2388515 | - | 621 | WP_031830093.1 | hypothetical protein | - |
| GPY29_RS12065 () | 2388569..2388703 | - | 135 | WP_079750020.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12070 () | 2389535..2389627 | - | 93 | WP_079750016.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12075 () | 2389649..2390023 | - | 375 | WP_031781849.1 | hypothetical protein | - |
| GPY29_RS12085 () | 2390583..2390768 | - | 186 | Protein_2178 | hypothetical protein | - |
| GPY29_RS12090 () | 2391142..2391231 | - | 90 | WP_078235976.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12095 () | 2391256..2391675 | - | 420 | WP_031781980.1 | hypothetical protein | - |
| GPY29_RS12100 () | 2391762..2392711 | - | 950 | Protein_2181 | IS1595 family transposase ISVfl1 | Transposase |
| GPY29_RS12105 () | 2392765..2393034 | - | 270 | WP_031781981.1 | hypothetical protein | - |
| GPY29_RS12110 () | 2393139..2393741 | - | 603 | WP_031781982.1 | hypothetical protein | - |
| GPY29_RS12115 () | 2393756..2393863 | - | 108 | WP_079750021.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12120 () | 2393881..2394333 | - | 453 | WP_031781793.1 | GNAT family N-acetyltransferase | - |
| GPY29_RS12125 () | 2394354..2394443 | - | 90 | WP_127891313.1 | hypothetical protein | - |
| GPY29_RS12130 () | 2394479..2395168 | - | 690 | WP_031781792.1 | hypothetical protein | - |
| GPY29_RS12135 () | 2395308..2395979 | - | 672 | WP_072599466.1 | HAD-IA family hydrolase | - |
| GPY29_RS12140 () | 2396014..2396106 | - | 93 | WP_079750017.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12145 () | 2396127..2396564 | - | 438 | WP_031813930.1 | hypothetical protein | - |
| GPY29_RS12150 () | 2396648..2396740 | - | 93 | WP_079750018.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12155 () | 2396755..2397108 | - | 354 | WP_031829440.1 | hypothetical protein | - |
| GPY29_RS12160 () | 2397148..2397270 | - | 123 | Protein_2193 | DUF3265 domain-containing protein | - |
| GPY29_RS12165 () | 2397327..2397572 | + | 246 | WP_017420672.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| GPY29_RS12170 () | 2397572..2397889 | + | 318 | WP_017420671.1 | CcdB family protein | - |
| GPY29_RS12175 () | 2397897..2397986 | - | 90 | WP_079763908.1 | DUF3265 domain-containing protein | - |
| GPY29_RS12180 () | 2398496..2398618 | - | 123 | Protein_2197 | DUF3265 domain-containing protein | - |
| GPY29_RS12185 () | 2398633..2399001 | - | 369 | WP_029831795.1 | VOC family protein | - |
| GPY29_RS12190 () | 2399257..2400219 | + | 963 | WP_021448851.1 | IS91 family transposase ISMno24 | Transposase |
| GPY29_RS12195 () | 2400270..2400743 | - | 474 | WP_005458833.1 | DUF2947 domain-containing protein | - |
| GPY29_RS12200 () | 2400757..2401344 | - | 588 | WP_029829796.1 | HD domain-containing protein | - |
| GPY29_RS12205 () | 2401346..2401930 | - | 585 | WP_005458831.1 | ribosomal protein S5-alanine N-acetyltransferase | - |
| GPY29_RS12210 () | 2401966..2403510 | - | 1545 | WP_005494791.1 | transcriptional regulator TyrR | - |
| GPY29_RS12215 () | 2403611..2404651 | - | 1041 | WP_029829795.1 | YcjF family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|