MGE detailed information
MGE type: Genomic_island MGE length: 21499 bp
Accession: NZ_CP046747 Location: 1469910..1491408 Organism: Vibrio cholerae strain 3541-04 Replicon: chromosome
Accession: NZ_CP046747 Location: 1469910..1491408 Organism: Vibrio cholerae strain 3541-04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY00_RS06860 () | 1465196..1465567 | + | 372 | WP_000085815.1 | YijD family membrane protein | - |
| GPY00_RS06865 () | 1465680..1467002 | + | 1323 | WP_001886535.1 | IS4 family transposase | - |
| GPY00_RS06870 () | 1467259..1468518 | + | 1260 | WP_158128508.1 | site-specific integrase | - |
| GPY00_RS06875 () | 1468578..1469330 | - | 753 | WP_158128509.1 | hypothetical protein | - |
| GPY00_RS06880 () | 1469910..1470590 | + | 681 | WP_158108034.1 | inovirus Gp2 family protein | - |
| GPY00_RS06885 () | 1470652..1471326 | + | 675 | WP_158128510.1 | inovirus Gp2 family protein | - |
| GPY00_RS06890 () | 1471380..1471979 | + | 600 | WP_158128511.1 | inovirus Gp2 family protein | - |
| GPY00_RS06895 () | 1472048..1472248 | + | 201 | WP_001211742.1 | AlpA family transcriptional regulator | - |
| GPY00_RS06900 () | 1472330..1472770 | + | 441 | WP_071919645.1 | ribonuclease HI | - |
| GPY00_RS06905 () | 1472979..1475531 | + | 2553 | WP_158128512.1 | LysM peptidoglycan-binding domain-containing protein | - |
| GPY00_RS06910 () | 1476296..1477978 | - | 1683 | WP_158128513.1 | protein kinase family protein | - |
| GPY00_RS06915 () | 1477982..1478719 | - | 738 | WP_158128514.1 | hypothetical protein | - |
| GPY00_RS06920 () | 1478722..1479555 | - | 834 | WP_033929399.1 | VWA domain-containing protein | - |
| GPY00_RS06925 () | 1479848..1481305 | + | 1458 | WP_104966955.1 | DUF262 domain-containing protein | - |
| GPY00_RS06930 () | 1481298..1483355 | + | 2058 | WP_158128515.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| GPY00_RS06935 () | 1483597..1483824 | - | 228 | WP_158128516.1 | hypothetical protein | - |
| GPY00_RS06940 () | 1483872..1484240 | - | 369 | WP_158128517.1 | hypothetical protein | - |
| GPY00_RS06945 () | 1484271..1485005 | - | 735 | WP_158128518.1 | transcriptional regulator | - |
| GPY00_RS06950 () | 1485144..1485320 | - | 177 | WP_158128519.1 | hypothetical protein | - |
| GPY00_RS06955 () | 1485324..1485767 | - | 444 | WP_158128520.1 | DUF2787 domain-containing protein | - |
| GPY00_RS06960 () | 1485818..1486255 | - | 438 | WP_199252422.1 | DUF2787 domain-containing protein | - |
| GPY00_RS06965 () | 1486252..1486725 | - | 474 | WP_148528079.1 | DNA repair protein RadC | - |
| GPY00_RS06970 () | 1486941..1487078 | + | 138 | WP_158128522.1 | hypothetical protein | - |
| GPY00_RS06975 () | 1487142..1488779 | + | 1638 | WP_158128523.1 | RNA-directed DNA polymerase | - |
| GPY00_RS06980 () | 1488806..1489513 | + | 708 | WP_123946169.1 | hypothetical protein | - |
| GPY00_RS06985 () | 1489733..1490200 | + | 468 | WP_000649312.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| GPY00_RS06990 () | 1490197..1491408 | + | 1212 | WP_158128524.1 | RelA/SpoT domain-containing protein | Toxin Detail |
| GPY00_RS06995 () | 1491654..1492763 | - | 1110 | WP_001888924.1 | tRNA (uridine(54)-C5)-methyltransferase TrmA | - |
| GPY00_RS07000 () | 1493161..1494993 | + | 1833 | WP_044128127.1 | TonB-dependent receptor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|